RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 MLST8Q9BVC4 326 aa9.47□□□□□ -0.89
SCARNA20.5-201ENST00000516991 SSBP4Q9BWG4 385 aaPredicted RBP9.47□□□□□ -0.89
SCARNA20.5-201ENST00000516991 VAX2Q9UIW0 290 aa9.47□□□□□ -0.89
SCARNA20.5-201ENST00000516991 SCO2A0A1W2PP80 73 aa9.46□□□□□ -0.9
SCARNA20.5-201ENST00000516991 F5H697 171 aa9.46□□□□□ -0.9
SCARNA20.5-201ENST00000516991 SMIM17P0DL12 118 aa9.46□□□□□ -0.9
SCARNA20.5-201ENST00000516991 RPL37AP61513 92 aaKnown RBP9.46□□□□□ -0.9
SCARNA20.5-201ENST00000516991 MBD3L1Q8WWY6 194 aa9.46□□□□□ -0.9
SCARNA20.5-201ENST00000516991 PRR34Q9NV39 138 aa9.46□□□□□ -0.9
SCARNA20.5-201ENST00000516991 TRBV25-1A0A075B6N4 114 aa9.45□□□□□ -0.9
SCARNA20.5-201ENST00000516991 ZNF345Q14585 488 aa9.45□□□□□ -0.9
SCARNA20.5-201ENST00000516991 FAM213BQ8TBF2 198 aa9.45□□□□□ -0.9
SCARNA20.5-201ENST00000516991 SFT2D1Q8WV19 159 aa9.45□□□□□ -0.9
SCARNA20.5-201ENST00000516991 RBX1P62877 108 aa9.44□□□□□ -0.9
SCARNA20.5-201ENST00000516991 C9orf163Q8N9P6 203 aa9.44□□□□□ -0.9
SCARNA20.5-201ENST00000516991 DERL1Q9BUN8 251 aa9.44□□□□□ -0.9
SCARNA20.5-201ENST00000516991 H7C1H1 209 aa9.43□□□□□ -0.9
SCARNA20.5-201ENST00000516991 PRSS1P07477 247 aa9.43□□□□□ -0.9
SCARNA20.5-201ENST00000516991 IQCJQ1A5X6 159 aa9.43□□□□□ -0.9
SCARNA20.5-201ENST00000516991 NTM-AS1Q6ZSK4 140 aa9.43□□□□□ -0.9
SCARNA20.5-201ENST00000516991 KCNRGQ8N5I3 272 aa9.43□□□□□ -0.9
SCARNA20.5-201ENST00000516991 IGHV1-24A0A0C4DH33 117 aa9.42□□□□□ -0.9
SCARNA20.5-201ENST00000516991 MUC21A0A0G2JKD1 596 aa9.42□□□□□ -0.9
SCARNA20.5-201ENST00000516991 MUC21A0A140T8X8 626 aa9.42□□□□□ -0.9
SCARNA20.5-201ENST00000516991 GAGE6Q13070 117 aa9.42□□□□□ -0.9
SCARNA20.5-201ENST00000516991 CLPSL2Q6UWE3 100 aa9.42□□□□□ -0.9
SCARNA20.5-201ENST00000516991 LINC00269Q8N2A0 174 aa9.42□□□□□ -0.9
SCARNA20.5-201ENST00000516991 CLRN3Q8NCR9 226 aa9.42□□□□□ -0.9
SCARNA20.5-201ENST00000516991 KIF25-AS1Q9Y6Z4 181 aa9.42□□□□□ -0.9
SCARNA20.5-201ENST00000516991 LRP1Q07954 4544 aaKnown RBP9.42□□□□□ -0.9
SCARNA20.5-201ENST00000516991 A0A1B0GV50 99 aa9.41□□□□□ -0.9
SCARNA20.5-201ENST00000516991 RGS21Q2M5E4 152 aa9.41□□□□□ -0.9
SCARNA20.5-201ENST00000516991 KRTAP26-1Q6PEX3 210 aa9.41□□□□□ -0.9
SCARNA20.5-201ENST00000516991 TMUB2Q71RG4 321 aa9.41□□□□□ -0.9
SCARNA20.5-201ENST00000516991 MGPP08493 103 aa9.4□□□□□ -0.9
SCARNA20.5-201ENST00000516991 H2AFB1P0C5Y9 115 aa9.4□□□□□ -0.9
SCARNA20.5-201ENST00000516991 RPL35P42766 123 aaKnown RBP9.4□□□□□ -0.9
SCARNA20.5-201ENST00000516991 RPS20P60866 119 aaKnown RBP9.4□□□□□ -0.9
SCARNA20.5-201ENST00000516991 EIF5AP63241 154 aaKnown RBP9.4□□□□□ -0.9
SCARNA20.5-201ENST00000516991 C11orf52Q96A22 123 aa9.4□□□□□ -0.9
SCARNA20.5-201ENST00000516991 MANBALQ9NQG1 85 aa9.4□□□□□ -0.9
SCARNA20.5-201ENST00000516991 TRAV8-4A0A0B4J246 113 aa9.39□□□□□ -0.91
SCARNA20.5-201ENST00000516991 A0A0D9SG52 128 aa9.39□□□□□ -0.91
SCARNA20.5-201ENST00000516991 KANTRA0A1W2PQU2 76 aa9.39□□□□□ -0.91
SCARNA20.5-201ENST00000516991 P01737 135 aa9.39□□□□□ -0.91
SCARNA20.5-201ENST00000516991 SSTP61278 116 aa9.39□□□□□ -0.91
SCARNA20.5-201ENST00000516991 CNBPP62633 177 aaKnown RBP9.39□□□□□ -0.91
SCARNA20.5-201ENST00000516991 REG3AQ06141 175 aa9.39□□□□□ -0.91
SCARNA20.5-201ENST00000516991 FER1L6-AS1Q8NA97 138 aa9.39□□□□□ -0.91
SCARNA20.5-201ENST00000516991 PLA2G2DQ9UNK4 145 aa9.39□□□□□ -0.91
SCARNA20.5-201ENST00000516991 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.39□□□□□ -0.91
SCARNA20.5-201ENST00000516991 HMSDA8MTL9 139 aa9.38□□□□□ -0.91
SCARNA20.5-201ENST00000516991 SMLR1H3BR10 107 aa9.38□□□□□ -0.91
SCARNA20.5-201ENST00000516991 M0QY20 66 aa9.38□□□□□ -0.91
SCARNA20.5-201ENST00000516991 BCL2L11O43521 198 aa9.38□□□□□ -0.91
SCARNA20.5-201ENST00000516991 IGLC6P0CF74 106 aa9.38□□□□□ -0.91
SCARNA20.5-201ENST00000516991 CACNG7P62955 275 aa9.38□□□□□ -0.91
SCARNA20.5-201ENST00000516991 DAZAP1Q96EP5 407 aaKnown RBP9.38□□□□□ -0.91
SCARNA20.5-201ENST00000516991 TMEM243Q9BU79 118 aa9.38□□□□□ -0.91
SCARNA20.5-201ENST00000516991 TPPP3Q9BW30 176 aa9.38□□□□□ -0.91
SCARNA20.5-201ENST00000516991 FAT3Q8TDW7 4589 aa9.38□□□□□ -0.91
SCARNA20.5-201ENST00000516991 XKRY2A2RUG3 117 aa9.37□□□□□ -0.91
SCARNA20.5-201ENST00000516991 GZMBP10144 247 aa9.37□□□□□ -0.91
SCARNA20.5-201ENST00000516991 CENPWQ5EE01 88 aa9.37□□□□□ -0.91
SCARNA20.5-201ENST00000516991 SUMO4Q6EEV6 95 aa9.37□□□□□ -0.91
SCARNA20.5-201ENST00000516991 SDIM1Q6ZPB5 146 aa9.37□□□□□ -0.91
SCARNA20.5-201ENST00000516991 OR2D3Q8NGH3 330 aa9.37□□□□□ -0.91
SCARNA20.5-201ENST00000516991 SMIM12Q96EX1 92 aa9.37□□□□□ -0.91
SCARNA20.5-201ENST00000516991 RNF185Q96GF1 192 aa9.37□□□□□ -0.91
SCARNA20.5-201ENST00000516991 AP5S1Q9NUS5 200 aa9.37□□□□□ -0.91
SCARNA20.5-201ENST00000516991 PKHD1L1Q86WI1 4243 aa9.36□□□□□ -0.91
SCARNA20.5-201ENST00000516991 HMCN2Q8NDA2 5059 aa9.36□□□□□ -0.91
SCARNA20.5-201ENST00000516991 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.36□□□□□ -0.91
SCARNA20.5-201ENST00000516991 A0A1B0GUV1 79 aa9.36□□□□□ -0.91
SCARNA20.5-201ENST00000516991 hDV102S1A0JD36 115 aa9.36□□□□□ -0.91
SCARNA20.5-201ENST00000516991 TRGC1P0CF51 173 aa9.36□□□□□ -0.91
SCARNA20.5-201ENST00000516991 HNRNPA3P51991 378 aaKnown RBP9.36□□□□□ -0.91
SCARNA20.5-201ENST00000516991 CIRBPQ14011 172 aaKnown RBP9.36□□□□□ -0.91
SCARNA20.5-201ENST00000516991 RASL11AQ6T310 242 aa9.36□□□□□ -0.91
SCARNA20.5-201ENST00000516991 C20orf203Q8NBC4 194 aa9.36□□□□□ -0.91
SCARNA20.5-201ENST00000516991 PGLYRP4Q96LB8 373 aa9.36□□□□□ -0.91
SCARNA20.5-201ENST00000516991 GNG13Q9P2W3 67 aa9.36□□□□□ -0.91
SCARNA20.5-201ENST00000516991 IGLV10-54A0A075B6I4 117 aa9.35□□□□□ -0.91
SCARNA20.5-201ENST00000516991 IGHV3-64A0A075B6Q5 118 aa9.35□□□□□ -0.91
SCARNA20.5-201ENST00000516991 F2Z2F3 143 aa9.35□□□□□ -0.91
SCARNA20.5-201ENST00000516991 TEX46H3BTG2 121 aa9.35□□□□□ -0.91
SCARNA20.5-201ENST00000516991 NKX2-5P52952 324 aaPredicted RBP9.35□□□□□ -0.91
SCARNA20.5-201ENST00000516991 WDR73Q6P4I2 378 aa9.35□□□□□ -0.91
SCARNA20.5-201ENST00000516991 TRAV1-1A0A0B4J248 108 aa9.34□□□□□ -0.91
SCARNA20.5-201ENST00000516991 C19orf71A6NCJ1 209 aa9.34□□□□□ -0.91
SCARNA20.5-201ENST00000516991 PANO1I0J062 215 aa9.34□□□□□ -0.91
SCARNA20.5-201ENST00000516991 BIN3Q9NQY0 253 aa9.34□□□□□ -0.91
SCARNA20.5-201ENST00000516991 IGLV4-60A0A075B6I1 120 aa9.33□□□□□ -0.92
SCARNA20.5-201ENST00000516991 UBE2L6O14933 153 aa9.33□□□□□ -0.92
SCARNA20.5-201ENST00000516991 GNG4P50150 75 aa9.33□□□□□ -0.92
SCARNA20.5-201ENST00000516991 RAB5CP51148 216 aa9.33□□□□□ -0.92
SCARNA20.5-201ENST00000516991 CCL20P78556 96 aa9.33□□□□□ -0.92
SCARNA20.5-201ENST00000516991 COTL1Q14019 142 aa9.33□□□□□ -0.92
SCARNA20.5-201ENST00000516991 Q6ZRU5 148 aa9.33□□□□□ -0.92
SCARNA20.5-201ENST00000516991 DPH3P1Q9H4G8 78 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms