RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 CARD19Q96LW7 228 aa10.32□□□□□ -0.76
SH3TC1-225ENST00000515682 MRPL53Q96EL3 112 aaKnown RBP10.32□□□□□ -0.76
SH3TC1-225ENST00000515682 MGAQ8IWI9 3026 aa10.32□□□□□ -0.76
SH3TC1-225ENST00000515682 TRBV12-3P01733 135 aa10.31□□□□□ -0.76
SH3TC1-225ENST00000515682 DAZ1Q9NQZ3 744 aaKnown RBP10.31□□□□□ -0.76
SH3TC1-225ENST00000515682 F8W735 103 aaPredicted RBP10.31□□□□□ -0.76
SH3TC1-225ENST00000515682 J3QLI3 93 aa10.31□□□□□ -0.76
SH3TC1-225ENST00000515682 IGHV4-38-2P0DP08 117 aa10.31□□□□□ -0.76
SH3TC1-225ENST00000515682 USMG5Q96IX5 58 aa10.31□□□□□ -0.76
SH3TC1-225ENST00000515682 ZFAND3Q9H8U3 227 aa10.31□□□□□ -0.76
SH3TC1-225ENST00000515682 FAM223BA6NKX1 122 aa10.31□□□□□ -0.76
SH3TC1-225ENST00000515682 FAM223AQ8IWN6 122 aa10.31□□□□□ -0.76
SH3TC1-225ENST00000515682 TOMM7Q9P0U1 55 aa10.31□□□□□ -0.76
SH3TC1-225ENST00000515682 PEMTQ9UBM1 199 aa10.31□□□□□ -0.76
SH3TC1-225ENST00000515682 CENPVL3A0A0U1RRI6 287 aa10.3□□□□□ -0.76
SH3TC1-225ENST00000515682 TEX49A0A1B0GTD5 131 aa10.3□□□□□ -0.76
SH3TC1-225ENST00000515682 LY6G5BQ8NDX9 201 aa10.3□□□□□ -0.76
SH3TC1-225ENST00000515682 LENEPQ9Y5L5 61 aa10.3□□□□□ -0.76
SH3TC1-225ENST00000515682 TNFRSF13BO14836 293 aaPredicted RBP10.3□□□□□ -0.76
SH3TC1-225ENST00000515682 NSUN5P1Q3KNT7 163 aa10.3□□□□□ -0.76
SH3TC1-225ENST00000515682 C20orf173Q96LM9 149 aa10.3□□□□□ -0.76
SH3TC1-225ENST00000515682 DEFB112Q30KQ8 113 aa10.3□□□□□ -0.76
SH3TC1-225ENST00000515682 ZNF292O60281 2723 aa10.3□□□□□ -0.76
SH3TC1-225ENST00000515682 DNAL4O96015 105 aa10.3□□□□□ -0.76
SH3TC1-225ENST00000515682 C19orf54Q5BKX5 351 aa10.3□□□□□ -0.76
SH3TC1-225ENST00000515682 DAND5Q8N907 189 aa10.3□□□□□ -0.76
SH3TC1-225ENST00000515682 IGLV2-18A0A075B6J9 118 aa10.29□□□□□ -0.76
SH3TC1-225ENST00000515682 IGHV3-38A0A0C4DH36 116 aa10.29□□□□□ -0.76
SH3TC1-225ENST00000515682 IGHG4P01861 327 aa10.29□□□□□ -0.76
SH3TC1-225ENST00000515682 Q8N1Y9 231 aa10.29□□□□□ -0.76
SH3TC1-225ENST00000515682 IGHV4-59P01825 116 aa10.29□□□□□ -0.76
SH3TC1-225ENST00000515682 FLNBO75369 2602 aaKnown RBP10.29□□□□□ -0.76
SH3TC1-225ENST00000515682 I3L3M4 83 aa10.28□□□□□ -0.76
SH3TC1-225ENST00000515682 NDUFA4O00483 81 aa10.28□□□□□ -0.76
SH3TC1-225ENST00000515682 CLEC2BQ92478 149 aa10.28□□□□□ -0.76
SH3TC1-225ENST00000515682 LEPROTO15243 131 aa10.28□□□□□ -0.76
SH3TC1-225ENST00000515682 SLC25A29Q8N8R3 303 aa10.28□□□□□ -0.76
SH3TC1-225ENST00000515682 DOPEY1Q5JWR5 2465 aa10.28□□□□□ -0.76
SH3TC1-225ENST00000515682 WDFY3Q8IZQ1 3526 aa10.28□□□□□ -0.76
SH3TC1-225ENST00000515682 LMO4P61968 165 aa10.27□□□□□ -0.76
SH3TC1-225ENST00000515682 OR13C6PQ8NH95 151 aa10.27□□□□□ -0.76
SH3TC1-225ENST00000515682 BOD1L1Q8NFC6 3051 aa10.27□□□□□ -0.76
SH3TC1-225ENST00000515682 IGHV3-16A0A0C4DH30 117 aa10.27□□□□□ -0.77
SH3TC1-225ENST00000515682 LINC01587Q99440 93 aa10.27□□□□□ -0.77
SH3TC1-225ENST00000515682 ZFAND2AQ8N6M9 145 aa10.27□□□□□ -0.77
SH3TC1-225ENST00000515682 COL6A3P12111 3177 aa10.27□□□□□ -0.77
SH3TC1-225ENST00000515682 TRAV4A0A0B4J268 109 aa10.27□□□□□ -0.77
SH3TC1-225ENST00000515682 NDUFV3P56181 108 aaKnown RBP10.27□□□□□ -0.77
SH3TC1-225ENST00000515682 TMEM101Q96IK0 257 aa10.27□□□□□ -0.77
SH3TC1-225ENST00000515682 CDIP1Q9H305 208 aa10.27□□□□□ -0.77
SH3TC1-225ENST00000515682 RS1O15537 224 aa10.26□□□□□ -0.77
SH3TC1-225ENST00000515682 RNASE1P07998 156 aaKnown RBP10.26□□□□□ -0.77
SH3TC1-225ENST00000515682 SYNJ2BPP57105 145 aa10.26□□□□□ -0.77
SH3TC1-225ENST00000515682 TRAV13-1A0A0B4J241 112 aa10.26□□□□□ -0.77
SH3TC1-225ENST00000515682 CEMP1Q6PRD7 247 aaPredicted RBP10.26□□□□□ -0.77
SH3TC1-225ENST00000515682 ODF3BA8MYP8 253 aa10.26□□□□□ -0.77
SH3TC1-225ENST00000515682 CRIP2P52943 208 aaPredicted RBP10.26□□□□□ -0.77
SH3TC1-225ENST00000515682 TRGV11A0A075B6L2 103 aa10.25□□□□□ -0.77
SH3TC1-225ENST00000515682 IGHV1OR15-1A0A075B7D0 117 aa10.25□□□□□ -0.77
SH3TC1-225ENST00000515682 C9orf153Q5TBE3 101 aa10.25□□□□□ -0.77
SH3TC1-225ENST00000515682 TIMM17AQ99595 171 aa10.25□□□□□ -0.77
SH3TC1-225ENST00000515682 IGHV3-30P01768 117 aa10.25□□□□□ -0.77
SH3TC1-225ENST00000515682 IGHV3-30-5P0DP03 117 aa10.25□□□□□ -0.77
SH3TC1-225ENST00000515682 SMCPP49901 116 aaPredicted RBP10.25□□□□□ -0.77
SH3TC1-225ENST00000515682 UBE2D1P51668 147 aa10.25□□□□□ -0.77
SH3TC1-225ENST00000515682 MDFICQ9P1T7 246 aa10.25□□□□□ -0.77
SH3TC1-225ENST00000515682 FN1P02751 2386 aaKnown RBP10.25□□□□□ -0.77
SH3TC1-225ENST00000515682 BLCAPP62952 87 aa10.25□□□□□ -0.77
SH3TC1-225ENST00000515682 PRO0461Q9UI25 63 aa10.25□□□□□ -0.77
SH3TC1-225ENST00000515682 TRBV7-9A0A0J9YWB2 115 aa10.24□□□□□ -0.77
SH3TC1-225ENST00000515682 ICOSQ9Y6W8 199 aa10.24□□□□□ -0.77
SH3TC1-225ENST00000515682 IGHV3-33P01772 117 aa10.24□□□□□ -0.77
SH3TC1-225ENST00000515682 GAGE2AQ6NT46 116 aa10.24□□□□□ -0.77
SH3TC1-225ENST00000515682 HIST2H2BCQ6DN03 193 aa10.24□□□□□ -0.77
SH3TC1-225ENST00000515682 ACANP16112 2415 aa10.24□□□□□ -0.77
SH3TC1-225ENST00000515682 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.24□□□□□ -0.77
SH3TC1-225ENST00000515682 IGKV2-29A2NJV5 120 aaPredicted RBP10.24□□□□□ -0.77
SH3TC1-225ENST00000515682 UBE2L6O14933 153 aa10.24□□□□□ -0.77
SH3TC1-225ENST00000515682 PRIMA1Q86XR5 153 aa10.24□□□□□ -0.77
SH3TC1-225ENST00000515682 CLPSL1A2RUU4 121 aa10.23□□□□□ -0.77
SH3TC1-225ENST00000515682 RHODO00212 210 aa10.23□□□□□ -0.77
SH3TC1-225ENST00000515682 COX8CQ7Z4L0 72 aa10.23□□□□□ -0.77
SH3TC1-225ENST00000515682 TSPEAR-AS2P59090 65 aa10.23□□□□□ -0.77
SH3TC1-225ENST00000515682 SIRPDQ9H106 197 aa10.23□□□□□ -0.77
SH3TC1-225ENST00000515682 TRBV10-2A0A0K0K1G8 114 aa10.23□□□□□ -0.77
SH3TC1-225ENST00000515682 HERV-K104P63124 156 aa10.23□□□□□ -0.77
SH3TC1-225ENST00000515682 C11orf71Q6IPW1 123 aa10.23□□□□□ -0.77
SH3TC1-225ENST00000515682 CCDC179H3BU77 68 aa10.22□□□□□ -0.77
SH3TC1-225ENST00000515682 EDA2RQ9HAV5 297 aa10.22□□□□□ -0.77
SH3TC1-225ENST00000515682 IGHV3-53P01767 116 aa10.22□□□□□ -0.77
SH3TC1-225ENST00000515682 IGHV3-30-3P0DP02 117 aa10.22□□□□□ -0.77
SH3TC1-225ENST00000515682 C5orf56Q8N8D9 126 aa10.22□□□□□ -0.77
SH3TC1-225ENST00000515682 ZNRF2Q8NHG8 242 aa10.22□□□□□ -0.77
SH3TC1-225ENST00000515682 AJUBAQ96IF1 538 aa10.22□□□□□ -0.77
SH3TC1-225ENST00000515682 RNASE3P12724 160 aaKnown RBP10.21□□□□□ -0.77
SH3TC1-225ENST00000515682 RHOHQ15669 191 aa10.21□□□□□ -0.77
SH3TC1-225ENST00000515682 LINC01619G3V211 115 aa10.21□□□□□ -0.77
SH3TC1-225ENST00000515682 COPS9Q8WXC6 57 aa10.21□□□□□ -0.77
SH3TC1-225ENST00000515682 VPREB3Q9UKI3 123 aa10.21□□□□□ -0.77
SH3TC1-225ENST00000515682 FAM236AA0A1B0GUQ0 79 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms