RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 HIST1H2BMQ99879 126 aa11.8□□□□□ -0.52
AP3S1-208ENST00000515066 TNFRSF6BO95407 300 aa11.79□□□□□ -0.52
AP3S1-208ENST00000515066 HHLA3Q9XRX5 114 aa11.79□□□□□ -0.52
AP3S1-208ENST00000515066 C1orf196B1AJZ1 125 aa11.78□□□□□ -0.52
AP3S1-208ENST00000515066 H7C1H1 209 aa11.78□□□□□ -0.52
AP3S1-208ENST00000515066 HTN3P15516 51 aa11.78□□□□□ -0.52
AP3S1-208ENST00000515066 CRYBA4P53673 196 aa11.78□□□□□ -0.52
AP3S1-208ENST00000515066 NEXN-AS1Q8NBZ9 246 aa11.78□□□□□ -0.52
AP3S1-208ENST00000515066 C18orf32Q8TCD1 76 aa11.78□□□□□ -0.52
AP3S1-208ENST00000515066 PRO0255Q9UI72 69 aa11.78□□□□□ -0.52
AP3S1-208ENST00000515066 F5H768 121 aa11.78□□□□□ -0.52
AP3S1-208ENST00000515066 OR10J3Q5JRS4 329 aa11.78□□□□□ -0.52
AP3S1-208ENST00000515066 VSIG2Q96IQ7 327 aa11.78□□□□□ -0.52
AP3S1-208ENST00000515066 NIT2Q9NQR4 276 aa11.78□□□□□ -0.52
AP3S1-208ENST00000515066 LAMTOR2Q9Y2Q5 125 aa11.78□□□□□ -0.52
AP3S1-208ENST00000515066 CSMD3Q7Z407 3707 aa11.77□□□□□ -0.53
AP3S1-208ENST00000515066 TRBV10-1A0A0K0K1A3 114 aa11.77□□□□□ -0.53
AP3S1-208ENST00000515066 TRBV6-5A0A0K0K1A5 114 aa11.77□□□□□ -0.53
AP3S1-208ENST00000515066 LOC100131303A0A0U1RQF7 123 aa11.77□□□□□ -0.53
AP3S1-208ENST00000515066 RHOHQ15669 191 aa11.77□□□□□ -0.53
AP3S1-208ENST00000515066 IQCJQ1A5X6 159 aa11.76□□□□□ -0.53
AP3S1-208ENST00000515066 TRAV26-1A0A087WT03 109 aa11.75□□□□□ -0.53
AP3S1-208ENST00000515066 SUMO2P61956 95 aaKnown RBP11.75□□□□□ -0.53
AP3S1-208ENST00000515066 DNAH7Q8WXX0 4024 aa11.75□□□□□ -0.53
AP3S1-208ENST00000515066 DEFB131BA0A096LNP1 70 aa11.75□□□□□ -0.53
AP3S1-208ENST00000515066 A0A0J9YY99 117 aa11.75□□□□□ -0.53
AP3S1-208ENST00000515066 PRSS47A8MTI9 375 aa11.75□□□□□ -0.53
AP3S1-208ENST00000515066 PPP1R17O96001 155 aa11.75□□□□□ -0.53
AP3S1-208ENST00000515066 LINC00694P0DN24 101 aa11.75□□□□□ -0.53
AP3S1-208ENST00000515066 POLR2KP53803 58 aaKnown RBP11.75□□□□□ -0.53
AP3S1-208ENST00000515066 C20orf78Q9BR46 151 aa11.75□□□□□ -0.53
AP3S1-208ENST00000515066 TMEM70Q9BUB7 260 aa11.75□□□□□ -0.53
AP3S1-208ENST00000515066 IGLV2-18A0A075B6J9 118 aa11.74□□□□□ -0.53
AP3S1-208ENST00000515066 SDHAF1A6NFY7 115 aa11.74□□□□□ -0.53
AP3S1-208ENST00000515066 PAX4O43316 350 aa11.74□□□□□ -0.53
AP3S1-208ENST00000515066 PRADC1Q9BSG0 188 aa11.74□□□□□ -0.53
AP3S1-208ENST00000515066 TRBV7-3A0A075B6L6 115 aa11.73□□□□□ -0.53
AP3S1-208ENST00000515066 RAB5BP61020 215 aa11.73□□□□□ -0.53
AP3S1-208ENST00000515066 ZNRF2Q8NHG8 242 aa11.73□□□□□ -0.53
AP3S1-208ENST00000515066 URB1-AS1Q96HZ7 61 aa11.73□□□□□ -0.53
AP3S1-208ENST00000515066 ST20Q9HBF5 79 aa11.73□□□□□ -0.53
AP3S1-208ENST00000515066 TRAV10A0A0B4J240 114 aa11.72□□□□□ -0.53
AP3S1-208ENST00000515066 LOC389332A0A1B0GUA5 103 aa11.72□□□□□ -0.53
AP3S1-208ENST00000515066 GYPEP15421 78 aa11.72□□□□□ -0.53
AP3S1-208ENST00000515066 LINC00310P59036 64 aa11.72□□□□□ -0.53
AP3S1-208ENST00000515066 Q0VG73 95 aa11.72□□□□□ -0.53
AP3S1-208ENST00000515066 NEGR1Q7Z3B1 354 aa11.72□□□□□ -0.53
AP3S1-208ENST00000515066 DNAJC30Q96LL9 226 aa11.72□□□□□ -0.53
AP3S1-208ENST00000515066 SMIM2Q9BVW6 85 aa11.72□□□□□ -0.53
AP3S1-208ENST00000515066 MAP1LC3AQ9H492 121 aa11.72□□□□□ -0.53
AP3S1-208ENST00000515066 TRBV27A0A0K0K1C4 114 aa11.71□□□□□ -0.53
AP3S1-208ENST00000515066 GAGE12JA6NER3 117 aa11.71□□□□□ -0.53
AP3S1-208ENST00000515066 IFI27P40305 119 aaPredicted RBP11.71□□□□□ -0.53
AP3S1-208ENST00000515066 UBE2D3P61077 147 aa11.71□□□□□ -0.53
AP3S1-208ENST00000515066 UBE2D2P62837 147 aa11.71□□□□□ -0.53
AP3S1-208ENST00000515066 RPL32P62910 135 aaKnown RBP11.71□□□□□ -0.53
AP3S1-208ENST00000515066 RPL36AP83881 106 aaKnown RBP11.71□□□□□ -0.53
AP3S1-208ENST00000515066 GAGE1Q13065 139 aa11.71□□□□□ -0.53
AP3S1-208ENST00000515066 GAGE4Q13068 117 aa11.71□□□□□ -0.53
AP3S1-208ENST00000515066 GAGE5Q13069 117 aa11.71□□□□□ -0.53
AP3S1-208ENST00000515066 GAGE13Q4V321 117 aa11.71□□□□□ -0.53
AP3S1-208ENST00000515066 RPL36ALQ969Q0 106 aaKnown RBP11.71□□□□□ -0.53
AP3S1-208ENST00000515066 TNFRSF18Q9Y5U5 241 aa11.71□□□□□ -0.53
AP3S1-208ENST00000515066 PHLDA1Q8WV24 401 aaPredicted RBP11.7□□□□□ -0.54
AP3S1-208ENST00000515066 DYNC2H1Q8NCM8 4307 aaKnown RBP11.7□□□□□ -0.54
AP3S1-208ENST00000515066 H3BNG1 76 aa11.69□□□□□ -0.54
AP3S1-208ENST00000515066 DEFB104AQ8WTQ1 72 aa11.69□□□□□ -0.54
AP3S1-208ENST00000515066 TMA7Q9Y2S6 64 aaKnown RBP11.69□□□□□ -0.54
AP3S1-208ENST00000515066 IGHV3-38A0A0C4DH36 116 aa11.68□□□□□ -0.54
AP3S1-208ENST00000515066 COA6Q5JTJ3 125 aaKnown RBP11.68□□□□□ -0.54
AP3S1-208ENST00000515066 Q8N8P6 123 aa11.68□□□□□ -0.54
AP3S1-208ENST00000515066 NXT2Q9NPJ8 142 aaKnown RBP11.68□□□□□ -0.54
AP3S1-208ENST00000515066 A0A096LPF7 62 aa11.68□□□□□ -0.54
AP3S1-208ENST00000515066 SERF1AO75920 110 aa11.68□□□□□ -0.54
AP3S1-208ENST00000515066 PMCHP20382 165 aa11.68□□□□□ -0.54
AP3S1-208ENST00000515066 NIT1Q86X76 327 aa11.68□□□□□ -0.54
AP3S1-208ENST00000515066 BAGE3Q86Y29 109 aa11.68□□□□□ -0.54
AP3S1-208ENST00000515066 PRSS3P2Q8NHM4 247 aa11.68□□□□□ -0.54
AP3S1-208ENST00000515066 TENM2Q9NT68 2774 aa11.67□□□□□ -0.54
AP3S1-208ENST00000515066 LINC01546A6NGU7 62 aa11.67□□□□□ -0.54
AP3S1-208ENST00000515066 VCYO14598 125 aa11.67□□□□□ -0.54
AP3S1-208ENST00000515066 NUPR1O60356 82 aa11.67□□□□□ -0.54
AP3S1-208ENST00000515066 STARD9Q9P2P6 4700 aa11.67□□□□□ -0.54
AP3S1-208ENST00000515066 I3L3M4 83 aa11.66□□□□□ -0.54
AP3S1-208ENST00000515066 TSHBP01222 138 aa11.66□□□□□ -0.54
AP3S1-208ENST00000515066 LINC00614P0C842 121 aa11.66□□□□□ -0.54
AP3S1-208ENST00000515066 NDUFA6P56556 154 aa11.66□□□□□ -0.54
AP3S1-208ENST00000515066 DAZ4Q86SG3 579 aaKnown RBP11.66□□□□□ -0.54
AP3S1-208ENST00000515066 DAZ3Q9NR90 486 aaKnown RBP11.66□□□□□ -0.54
AP3S1-208ENST00000515066 ICOSQ9Y6W8 199 aa11.66□□□□□ -0.54
AP3S1-208ENST00000515066 TCAPO15273 167 aa11.65□□□□□ -0.54
AP3S1-208ENST00000515066 MRPL23Q16540 153 aaKnown RBP11.65□□□□□ -0.54
AP3S1-208ENST00000515066 RNASEKQ6P5S7 137 aaKnown RBP11.65□□□□□ -0.55
AP3S1-208ENST00000515066 NTM-AS1Q6ZSK4 140 aa11.65□□□□□ -0.55
AP3S1-208ENST00000515066 ATP6V0E2Q8NHE4 81 aa11.65□□□□□ -0.55
AP3S1-208ENST00000515066 AP5S1Q9NUS5 200 aa11.65□□□□□ -0.55
AP3S1-208ENST00000515066 FA2HQ7L5A8 372 aa11.64□□□□□ -0.55
AP3S1-208ENST00000515066 KIR2DL4Q99706 377 aa11.64□□□□□ -0.55
AP3S1-208ENST00000515066 PLECQ15149 4684 aaKnown RBP11.63□□□□□ -0.55
AP3S1-208ENST00000515066 CHCHD1Q96BP2 118 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms