RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 SPTBN2O15020 2390 aa2.74□□□□□ -1.97
CAST-242ENST00000515063 TEP1Q99973 2627 aaKnown RBP2.73□□□□□ -1.97
CAST-242ENST00000515063 CEP295Q9C0D2 2601 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 SPTA1P02549 2419 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 IGLV4-3A0A075B6K6 122 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 A0A087WX48 190 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 TRAV40A0A0B4J280 105 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 MUC21A0A0G2JKD1 596 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 MUC21A0A140T8X8 626 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 J3QKU1 62 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 CCL25O15444 150 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 DPM2O94777 84 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 IGKCP01834 107 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 MSMBP08118 114 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 LEPP41159 167 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 ASIPP42127 132 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 ATP5J2P56134 94 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 LY6DQ14210 128 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 MUC21Q5SSG8 566 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 FAM159AQ6UWV7 190 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 ADAMTSL5Q6ZMM2 481 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 GTF2H5Q6ZYL4 71 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 RNF182Q8N6D2 247 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 TMEM158Q8WZ71 300 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 SMIM2Q9BVW6 85 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 JPT2Q9H910 190 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 DAZ1Q9NQZ3 744 aaKnown RBP2.73□□□□□ -1.97
CAST-242ENST00000515063 UFC1Q9Y3C8 167 aa2.73□□□□□ -1.97
CAST-242ENST00000515063 BOD1L1Q8NFC6 3051 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 HRNRQ86YZ3 2850 aaPredicted RBP2.72□□□□□ -1.97
CAST-242ENST00000515063 IGHV3-35A0A0C4DH35 117 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 IGHV3-38A0A0C4DH36 116 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 A0A0U1RRA0 63 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 KLLNB2CW77 178 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 SMKR1H3BMG3 65 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 H3BUX3 64 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 H7C1H1 209 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 LGALS9O00182 355 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 DUSP14O95147 198 aaKnown RBP2.72□□□□□ -1.97
CAST-242ENST00000515063 SMIM17P0DL12 118 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 S100A4P26447 101 aaKnown RBP2.72□□□□□ -1.97
CAST-242ENST00000515063 PLNP26678 52 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 PSMB8P28062 276 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 UQCRFS1P47985 274 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 HERV-K104P63124 156 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 PTPN13Q12923 2485 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 ATMQ13315 3056 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 VAMP3Q15836 100 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 OR4C5Q8NGB2 326 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 OR5A1Q8NGJ0 315 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 TOMM6Q96B49 74 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 AP1S3Q96PC3 154 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 FOXC2Q99958 501 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 RHPN1-AS1Q9BWJ2 59 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 OCR1Q9BZK8 76 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 EDA2RQ9HAV5 297 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 PRR34Q9NV39 138 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 HHLA3Q9XRX5 114 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 PHLDA3Q9Y5J5 127 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 ABCA2Q9BZC7 2435 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 SPTBN1Q01082 2364 aaKnown RBP2.72□□□□□ -1.97
CAST-242ENST00000515063 ANKRD17O75179 2603 aaKnown RBP2.72□□□□□ -1.97
CAST-242ENST00000515063 ASPMQ8IZT6 3477 aa2.72□□□□□ -1.97
CAST-242ENST00000515063 DOPEY1Q5JWR5 2465 aa2.71□□□□□ -1.97
CAST-242ENST00000515063 IGHV3OR16-8A0A075B7F1 116 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 TRAV2A0A0B4J234 112 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 IGHV3-66A0A0C4DH42 116 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 TRBV6-5A0A0K0K1A5 114 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 A8MTW9 85 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 F8VRH5 84 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.71□□□□□ -1.98
CAST-242ENST00000515063 H3BVH4 76 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 ZNF207O43670 478 aaKnown RBP2.71□□□□□ -1.98
CAST-242ENST00000515063 PRB1P04280 392 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 SMIM13P0DJ93 91 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 RNASE3P12724 160 aaKnown RBP2.71□□□□□ -1.98
CAST-242ENST00000515063 CDKN1BP46527 198 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 POLR2KP53803 58 aaKnown RBP2.71□□□□□ -1.98
CAST-242ENST00000515063 PRR9Q5T870 116 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 UFSP1Q6NVU6 142 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 UNQ9165/PRO28630Q6UXU0 137 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 BRD3OSQ6XYD6 125 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 Q6ZR54 194 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 ERASQ7Z444 233 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 LRRC75A-AS1Q8N1F1 130 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 TEX29Q8N6K0 151 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 LINC00612Q8N6U2 182 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 C11orf45Q8TAV5 145 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 DCANP1Q8TF63 244 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 PTH2Q96A98 100 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 TMEM141Q96I45 108 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 TIMM8BQ9Y5J9 83 aaPredicted RBP2.71□□□□□ -1.98
CAST-242ENST00000515063 DCHS1Q96JQ0 3298 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 ZZEF1O43149 2961 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 KALRNO60229 2985 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 ABCA12Q86UK0 2595 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 ADGRG4Q8IZF6 3080 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 LAMA5O15230 3695 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 DMXL2Q8TDJ6 3036 aa2.71□□□□□ -1.98
CAST-242ENST00000515063 IGF2RP11717 2491 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms