RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 PTTG1IPP53801 180 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 RIPPLY3P57055 190 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 UBE2V1Q13404 147 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 VAMP3Q15836 100 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 JMJD8Q96S16 334 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 CHAC1Q9BUX1 264 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 UNC79Q9P2D8 2635 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 ITPR2Q14571 2701 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 MTORP42345 2549 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 TRAV25A0A0B4J276 109 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 A6NDN8 102 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 ZNF415Q09FC8 603 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 MAPKAPK5-AS1Q8N8E1 139 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 TIMM17AQ99595 171 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 C16orf95Q9H693 158 aa5.99□□□□□ -1.45
CPNE4-211ENST00000514439 TSSC4Q9Y5U2 329 aaPredicted RBP5.99□□□□□ -1.45
CPNE4-211ENST00000514439 ANK3Q12955 4377 aaKnown RBP5.98□□□□□ -1.45
CPNE4-211ENST00000514439 IGHV3-73A0A0B4J1V6 119 aa5.98□□□□□ -1.45
CPNE4-211ENST00000514439 M0R2P5 195 aa5.98□□□□□ -1.45
CPNE4-211ENST00000514439 INSP01308 110 aa5.98□□□□□ -1.45
CPNE4-211ENST00000514439 RHOHQ15669 191 aa5.98□□□□□ -1.45
CPNE4-211ENST00000514439 TMEM141Q96I45 108 aa5.98□□□□□ -1.45
CPNE4-211ENST00000514439 LINC01587Q99440 93 aa5.98□□□□□ -1.45
CPNE4-211ENST00000514439 IGLV4-69A0A075B6H9 119 aa5.98□□□□□ -1.45
CPNE4-211ENST00000514439 OR11H12B2RN74 326 aa5.98□□□□□ -1.45
CPNE4-211ENST00000514439 NSUN5P1Q3KNT7 163 aa5.98□□□□□ -1.45
CPNE4-211ENST00000514439 OR11H2Q8NH07 326 aa5.98□□□□□ -1.45
CPNE4-211ENST00000514439 LINC00467Q9BRT7 94 aa5.98□□□□□ -1.45
CPNE4-211ENST00000514439 A8MWV9 139 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 H3BRM9 83 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 P0DMU3 169 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 FAM231AP0DMU4 169 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 FAM231CP0DMU5 169 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 GCSHP23434 173 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 PROK1P58294 105 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 PMVKQ15126 192 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 UFSP1Q6NVU6 142 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 C11orf72Q8NBR9 251 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 CLUHP3Q96NS8 147 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 CST9LQ9H4G1 147 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 EDA2RQ9HAV5 297 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 SETD2Q9BYW2 2564 aaPredicted RBP5.97□□□□□ -1.45
CPNE4-211ENST00000514439 WNK1Q9H4A3 2382 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 C11orf86A6NJI1 115 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 E9PLD3 99 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 I3L3M4 83 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 K7EP13 123 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 FXYD2P54710 66 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 EMP1P54849 157 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 SCGB2A2Q13296 93 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 PIK3CD-AS1Q5SR53 167 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 AMMECR1LQ6DCA0 310 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 STHQ8IWL8 128 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 XCL2Q9UBD3 114 aa5.97□□□□□ -1.45
CPNE4-211ENST00000514439 HILS1P60008 231 aa5.96□□□□□ -1.46
CPNE4-211ENST00000514439 CFAP126Q5VTH2 177 aa5.96□□□□□ -1.46
CPNE4-211ENST00000514439 ZNF418Q8TF45 676 aaPredicted RBP5.96□□□□□ -1.46
CPNE4-211ENST00000514439 PTH2Q96A98 100 aa5.96□□□□□ -1.46
CPNE4-211ENST00000514439 PRADC1Q9BSG0 188 aa5.96□□□□□ -1.46
CPNE4-211ENST00000514439 MYMXA0A1B0GTQ4 84 aa5.96□□□□□ -1.46
CPNE4-211ENST00000514439 C9orf118A6NHY6 69 aa5.96□□□□□ -1.46
CPNE4-211ENST00000514439 FOSL1P15407 271 aa5.96□□□□□ -1.46
CPNE4-211ENST00000514439 C20orf203Q8NBC4 194 aa5.96□□□□□ -1.46
CPNE4-211ENST00000514439 OPRPNQ99935 248 aaPredicted RBP5.96□□□□□ -1.46
CPNE4-211ENST00000514439 MRPL16Q9NX20 251 aaKnown RBP5.96□□□□□ -1.46
CPNE4-211ENST00000514439 FASNP49327 2511 aaKnown RBP5.95□□□□□ -1.46
CPNE4-211ENST00000514439 SAP30O75446 220 aa5.95□□□□□ -1.46
CPNE4-211ENST00000514439 AZU1P20160 251 aa5.95□□□□□ -1.46
CPNE4-211ENST00000514439 PAPPA-AS1Q5QFB9 102 aa5.95□□□□□ -1.46
CPNE4-211ENST00000514439 Q6ZSN1 163 aa5.95□□□□□ -1.46
CPNE4-211ENST00000514439 CEND1Q8N111 149 aa5.95□□□□□ -1.46
CPNE4-211ENST00000514439 C1orf158Q8N1D5 194 aa5.95□□□□□ -1.46
CPNE4-211ENST00000514439 OR4C5Q8NGB2 326 aa5.95□□□□□ -1.46
CPNE4-211ENST00000514439 RAB37Q96AX2 223 aa5.95□□□□□ -1.46
CPNE4-211ENST00000514439 SMR3AQ99954 134 aa5.95□□□□□ -1.46
CPNE4-211ENST00000514439 SPXQ9BT56 116 aa5.95□□□□□ -1.46
CPNE4-211ENST00000514439 IGHV3OR16-12A0A075B7B8 117 aa5.94□□□□□ -1.46
CPNE4-211ENST00000514439 H3BUT2 72 aa5.94□□□□□ -1.46
CPNE4-211ENST00000514439 BEAN1Q3B7T3 259 aa5.94□□□□□ -1.46
CPNE4-211ENST00000514439 ZNRF2Q8NHG8 242 aa5.94□□□□□ -1.46
CPNE4-211ENST00000514439 NAA38Q9BRA0 125 aaKnown RBP5.94□□□□□ -1.46
CPNE4-211ENST00000514439 TM2D2Q9BX73 214 aa5.94□□□□□ -1.46
CPNE4-211ENST00000514439 Q9UF83 564 aa5.94□□□□□ -1.46
CPNE4-211ENST00000514439 ADARB2-AS1A8MUL3 147 aa5.94□□□□□ -1.46
CPNE4-211ENST00000514439 RHODO00212 210 aa5.94□□□□□ -1.46
CPNE4-211ENST00000514439 TNFRSF18Q9Y5U5 241 aa5.94□□□□□ -1.46
CPNE4-211ENST00000514439 NACAE9PAV3 2078 aa5.93□□□□□ -1.46
CPNE4-211ENST00000514439 ZNF815PA8K554 130 aa5.93□□□□□ -1.46
CPNE4-211ENST00000514439 K7ERJ3 54 aa5.93□□□□□ -1.46
CPNE4-211ENST00000514439 HERVK_113P61574 105 aa5.93□□□□□ -1.46
CPNE4-211ENST00000514439 TAL2Q16559 108 aa5.93□□□□□ -1.46
CPNE4-211ENST00000514439 TMEM170BQ5T4T1 132 aa5.93□□□□□ -1.46
CPNE4-211ENST00000514439 HIST1H4GQ99525 98 aa5.93□□□□□ -1.46
CPNE4-211ENST00000514439 IGLV4-3A0A075B6K6 122 aa5.93□□□□□ -1.46
CPNE4-211ENST00000514439 RS1O15537 224 aa5.93□□□□□ -1.46
CPNE4-211ENST00000514439 NDUFA7O95182 113 aa5.93□□□□□ -1.46
CPNE4-211ENST00000514439 IGHV3-53P01767 116 aa5.93□□□□□ -1.46
CPNE4-211ENST00000514439 SMIM13P0DJ93 91 aa5.93□□□□□ -1.46
CPNE4-211ENST00000514439 IL17DQ8TAD2 202 aa5.93□□□□□ -1.46
CPNE4-211ENST00000514439 NHP2Q9NX24 153 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms