RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TMEM208Q9BTX3 173 aa6.06□□□□□ -1.44
RNF4-220ENST00000513578 CSTL1Q9H114 145 aa6.06□□□□□ -1.44
RNF4-220ENST00000513578 PRO1933Q9H354 126 aa6.06□□□□□ -1.44
RNF4-220ENST00000513578 AZU1P20160 251 aa6.05□□□□□ -1.44
RNF4-220ENST00000513578 ZNF56Q15929 161 aa6.05□□□□□ -1.44
RNF4-220ENST00000513578 SPATA45Q537H7 98 aa6.05□□□□□ -1.44
RNF4-220ENST00000513578 CFAP126Q5VTH2 177 aa6.05□□□□□ -1.44
RNF4-220ENST00000513578 GTSCR1Q86UQ5 136 aa6.05□□□□□ -1.44
RNF4-220ENST00000513578 TOMM6Q96B49 74 aa6.05□□□□□ -1.44
RNF4-220ENST00000513578 C16orf74Q96GX8 76 aa6.05□□□□□ -1.44
RNF4-220ENST00000513578 DNAJC30Q96LL9 226 aa6.05□□□□□ -1.44
RNF4-220ENST00000513578 OVOL2Q9BRP0 275 aa6.05□□□□□ -1.44
RNF4-220ENST00000513578 MIEN1Q9BRT3 115 aa6.05□□□□□ -1.44
RNF4-220ENST00000513578 ZMAT4Q9H898 229 aa6.05□□□□□ -1.44
RNF4-220ENST00000513578 TRAV12-1A0A0B4J245 112 aa6.04□□□□□ -1.44
RNF4-220ENST00000513578 SDHAF1A6NFY7 115 aa6.04□□□□□ -1.44
RNF4-220ENST00000513578 NUDT3O95989 172 aa6.04□□□□□ -1.44
RNF4-220ENST00000513578 IGHV3-53P01767 116 aa6.04□□□□□ -1.44
RNF4-220ENST00000513578 HTN1P15515 57 aa6.04□□□□□ -1.44
RNF4-220ENST00000513578 RHOHQ15669 191 aa6.04□□□□□ -1.44
RNF4-220ENST00000513578 FAM74A4Q5TZK3 123 aa6.04□□□□□ -1.44
RNF4-220ENST00000513578 MRPL52Q86TS9 123 aaKnown RBP6.04□□□□□ -1.44
RNF4-220ENST00000513578 KIR2DL5BQ8NHK3 375 aa6.04□□□□□ -1.44
RNF4-220ENST00000513578 KIR2DL4Q99706 377 aa6.04□□□□□ -1.44
RNF4-220ENST00000513578 WFDC10AQ9H1F0 79 aa6.04□□□□□ -1.44
RNF4-220ENST00000513578 PAM16Q9Y3D7 125 aa6.04□□□□□ -1.44
RNF4-220ENST00000513578 SMIM9A6NGZ8 99 aa6.03□□□□□ -1.44
RNF4-220ENST00000513578 IGLC3P0DOY3 106 aa6.03□□□□□ -1.44
RNF4-220ENST00000513578 IGLL1P15814 213 aa6.03□□□□□ -1.44
RNF4-220ENST00000513578 RPL35AP18077 110 aaKnown RBP6.03□□□□□ -1.44
RNF4-220ENST00000513578 KRTAP24-1Q3LI83 254 aa6.03□□□□□ -1.44
RNF4-220ENST00000513578 ERASQ7Z444 233 aa6.03□□□□□ -1.44
RNF4-220ENST00000513578 UQCR10Q9UDW1 63 aa6.03□□□□□ -1.44
RNF4-220ENST00000513578 TRAV4A0A0B4J268 109 aa6.02□□□□□ -1.45
RNF4-220ENST00000513578 PLAC8L1A1L4L8 177 aa6.02□□□□□ -1.45
RNF4-220ENST00000513578 HSBP1L1C9JCN9 74 aa6.02□□□□□ -1.45
RNF4-220ENST00000513578 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.02□□□□□ -1.45
RNF4-220ENST00000513578 I3L3M4 83 aa6.02□□□□□ -1.45
RNF4-220ENST00000513578 PRM2P04554 102 aa6.02□□□□□ -1.45
RNF4-220ENST00000513578 DEFA6Q01524 100 aa6.02□□□□□ -1.45
RNF4-220ENST00000513578 ODF1Q14990 250 aa6.02□□□□□ -1.45
RNF4-220ENST00000513578 RRN3P1Q2M238 152 aa6.02□□□□□ -1.45
RNF4-220ENST00000513578 SHISA2Q6UWI4 295 aa6.02□□□□□ -1.45
RNF4-220ENST00000513578 C2orf66Q6UXQ4 117 aa6.02□□□□□ -1.45
RNF4-220ENST00000513578 C18orf15Q96N68 181 aa6.02□□□□□ -1.45
RNF4-220ENST00000513578 MRPL16Q9NX20 251 aaKnown RBP6.02□□□□□ -1.45
RNF4-220ENST00000513578 CYSLTR1Q9Y271 337 aa6.02□□□□□ -1.45
RNF4-220ENST00000513578 A0A087WX48 190 aa6.01□□□□□ -1.45
RNF4-220ENST00000513578 TRBV10-1A0A0K0K1A3 114 aa6.01□□□□□ -1.45
RNF4-220ENST00000513578 PRSS1P07477 247 aa6.01□□□□□ -1.45
RNF4-220ENST00000513578 NPSP0C0P6 89 aa6.01□□□□□ -1.45
RNF4-220ENST00000513578 ATOH7Q8N100 152 aa6.01□□□□□ -1.45
RNF4-220ENST00000513578 TMEM141Q96I45 108 aa6.01□□□□□ -1.45
RNF4-220ENST00000513578 C14orf144Q96I85 54 aa6.01□□□□□ -1.45
RNF4-220ENST00000513578 SCGB3A1Q96QR1 104 aa6.01□□□□□ -1.45
RNF4-220ENST00000513578 TIMM17AQ99595 171 aa6.01□□□□□ -1.45
RNF4-220ENST00000513578 IGHV3OR16-12A0A075B7B8 117 aa6□□□□□ -1.45
RNF4-220ENST00000513578 IGIPA6NJ69 53 aa6□□□□□ -1.45
RNF4-220ENST00000513578 TSHBP01222 138 aa6□□□□□ -1.45
RNF4-220ENST00000513578 APOC4P55056 127 aa6□□□□□ -1.45
RNF4-220ENST00000513578 MAJINQ3KP22 176 aa6□□□□□ -1.45
RNF4-220ENST00000513578 LBHQ53QV2 105 aaPredicted RBP6□□□□□ -1.45
RNF4-220ENST00000513578 Q6ZN92 141 aa6□□□□□ -1.45
RNF4-220ENST00000513578 Q6ZSN1 163 aa6□□□□□ -1.45
RNF4-220ENST00000513578 LINC00612Q8N6U2 182 aa6□□□□□ -1.45
RNF4-220ENST00000513578 NEXN-AS1Q8NBZ9 246 aa6□□□□□ -1.45
RNF4-220ENST00000513578 OR4C5Q8NGB2 326 aa6□□□□□ -1.45
RNF4-220ENST00000513578 PMCHL2Q9BQD1 86 aa6□□□□□ -1.45
RNF4-220ENST00000513578 ZMAT5Q9UDW3 170 aaKnown RBP6□□□□□ -1.45
RNF4-220ENST00000513578 TNFRSF18Q9Y5U5 241 aa6□□□□□ -1.45
RNF4-220ENST00000513578 TGP01266 2768 aa6□□□□□ -1.45
RNF4-220ENST00000513578 TRGV1A0A0A0MS02 117 aa5.99□□□□□ -1.45
RNF4-220ENST00000513578 hDV102S1A0JD36 115 aa5.99□□□□□ -1.45
RNF4-220ENST00000513578 DPM2O94777 84 aa5.99□□□□□ -1.45
RNF4-220ENST00000513578 IGKCP01834 107 aa5.99□□□□□ -1.45
RNF4-220ENST00000513578 P0DMU3 169 aa5.99□□□□□ -1.45
RNF4-220ENST00000513578 FAM231AP0DMU4 169 aa5.99□□□□□ -1.45
RNF4-220ENST00000513578 FAM231CP0DMU5 169 aa5.99□□□□□ -1.45
RNF4-220ENST00000513578 CRYBA4P53673 196 aa5.99□□□□□ -1.45
RNF4-220ENST00000513578 Q6ZTI0 123 aa5.99□□□□□ -1.45
RNF4-220ENST00000513578 C20orf203Q8NBC4 194 aa5.99□□□□□ -1.45
RNF4-220ENST00000513578 DKK2Q9UBU2 259 aa5.99□□□□□ -1.45
RNF4-220ENST00000513578 HHLA3Q9XRX5 114 aa5.99□□□□□ -1.45
RNF4-220ENST00000513578 MRPS16Q9Y3D3 137 aaKnown RBP5.99□□□□□ -1.45
RNF4-220ENST00000513578 PYGO1Q9Y3Y4 419 aa5.99□□□□□ -1.45
RNF4-220ENST00000513578 X6R8D5 127 aa5.99□□□□□ -1.45
RNF4-220ENST00000513578 IGHV3-73A0A0B4J1V6 119 aa5.98□□□□□ -1.45
RNF4-220ENST00000513578 A8MZ25 164 aa5.98□□□□□ -1.45
RNF4-220ENST00000513578 F8VRH5 84 aa5.98□□□□□ -1.45
RNF4-220ENST00000513578 H0Y8G0 127 aa5.98□□□□□ -1.45
RNF4-220ENST00000513578 DLEU1O43261 78 aa5.98□□□□□ -1.45
RNF4-220ENST00000513578 COX8AP10176 69 aa5.98□□□□□ -1.45
RNF4-220ENST00000513578 PLNP26678 52 aa5.98□□□□□ -1.45
RNF4-220ENST00000513578 EGFEM1PQ0D2K5 195 aa5.98□□□□□ -1.45
RNF4-220ENST00000513578 C4orf48Q5BLP8 95 aa5.98□□□□□ -1.45
RNF4-220ENST00000513578 NEGR1Q7Z3B1 354 aa5.98□□□□□ -1.45
RNF4-220ENST00000513578 BAALCQ8WXS3 180 aa5.98□□□□□ -1.45
RNF4-220ENST00000513578 NOP10Q9NPE3 64 aaKnown RBP5.98□□□□□ -1.45
RNF4-220ENST00000513578 TP53TG1Q9Y2A0 90 aa5.98□□□□□ -1.45
RNF4-220ENST00000513578 MEGF8Q7Z7M0 2845 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms