RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 VAX2Q9UIW0 290 aa6.79□□□□□ -1.32
DDX41-216ENST00000513562 TRBV25-1A0A075B6N4 114 aa6.78□□□□□ -1.32
DDX41-216ENST00000513562 IGKV2-24A0A0C4DH68 120 aa6.78□□□□□ -1.32
DDX41-216ENST00000513562 A0A0U1RQV1 116 aa6.78□□□□□ -1.32
DDX41-216ENST00000513562 SH2D1AO60880 128 aa6.78□□□□□ -1.32
DDX41-216ENST00000513562 GZMBP10144 247 aa6.78□□□□□ -1.32
DDX41-216ENST00000513562 COX8CQ7Z4L0 72 aa6.78□□□□□ -1.32
DDX41-216ENST00000513562 PRSS3P2Q8NHM4 247 aa6.78□□□□□ -1.32
DDX41-216ENST00000513562 LYPD6BQ8NI32 183 aa6.78□□□□□ -1.32
DDX41-216ENST00000513562 WFDC1Q9HC57 220 aa6.78□□□□□ -1.32
DDX41-216ENST00000513562 TRBV6-1A0A0K0K1D8 114 aa6.77□□□□□ -1.33
DDX41-216ENST00000513562 CYCSP99999 105 aaKnown RBP6.77□□□□□ -1.33
DDX41-216ENST00000513562 ZNF56Q15929 161 aa6.77□□□□□ -1.33
DDX41-216ENST00000513562 IQCJQ1A5X6 159 aa6.77□□□□□ -1.33
DDX41-216ENST00000513562 LINC01559Q495D7 138 aa6.77□□□□□ -1.33
DDX41-216ENST00000513562 C15orf56Q8N910 161 aa6.77□□□□□ -1.33
DDX41-216ENST00000513562 C20orf203Q8NBC4 194 aa6.77□□□□□ -1.33
DDX41-216ENST00000513562 PPP1R1CQ8WVI7 109 aa6.77□□□□□ -1.33
DDX41-216ENST00000513562 RAB24Q969Q5 203 aa6.77□□□□□ -1.33
DDX41-216ENST00000513562 DERL1Q9BUN8 251 aa6.77□□□□□ -1.33
DDX41-216ENST00000513562 TMEM167BQ9NRX6 74 aa6.77□□□□□ -1.33
DDX41-216ENST00000513562 INMT-MINDY4F8WBC2 141 aa6.76□□□□□ -1.33
DDX41-216ENST00000513562 RPL12P30050 165 aaKnown RBP6.76□□□□□ -1.33
DDX41-216ENST00000513562 RPS10P46783 165 aaKnown RBP6.76□□□□□ -1.33
DDX41-216ENST00000513562 FAM162BQ5T6X4 162 aa6.76□□□□□ -1.33
DDX41-216ENST00000513562 Q6ZRP5 223 aa6.76□□□□□ -1.33
DDX41-216ENST00000513562 TMSB15BA0A087X1C1 80 aa6.75□□□□□ -1.33
DDX41-216ENST00000513562 A0A1W2PRE2 83 aa6.75□□□□□ -1.33
DDX41-216ENST00000513562 H7C1H1 209 aa6.75□□□□□ -1.33
DDX41-216ENST00000513562 RAB5CP51148 216 aa6.75□□□□□ -1.33
DDX41-216ENST00000513562 H2BFSP57053 126 aa6.75□□□□□ -1.33
DDX41-216ENST00000513562 LCE2AQ5TA79 106 aaPredicted RBP6.75□□□□□ -1.33
DDX41-216ENST00000513562 MARVELD1Q9BSK0 173 aa6.75□□□□□ -1.33
DDX41-216ENST00000513562 GFRA4Q9GZZ7 299 aa6.75□□□□□ -1.33
DDX41-216ENST00000513562 IGLV4-60A0A075B6I1 120 aa6.74□□□□□ -1.33
DDX41-216ENST00000513562 A0A096LNI7 61 aa6.74□□□□□ -1.33
DDX41-216ENST00000513562 IGHV1-24A0A0C4DH33 117 aa6.74□□□□□ -1.33
DDX41-216ENST00000513562 A0A1B0GUV1 79 aa6.74□□□□□ -1.33
DDX41-216ENST00000513562 FAM231BA6NCW3 169 aa6.74□□□□□ -1.33
DDX41-216ENST00000513562 PEX7O00628 323 aa6.74□□□□□ -1.33
DDX41-216ENST00000513562 MPC2O95563 127 aa6.74□□□□□ -1.33
DDX41-216ENST00000513562 CXorf1O96002 111 aa6.74□□□□□ -1.33
DDX41-216ENST00000513562 IFNA7P01567 189 aa6.74□□□□□ -1.33
DDX41-216ENST00000513562 PET100P0DJ07 73 aa6.74□□□□□ -1.33
DDX41-216ENST00000513562 ZNF674Q2M3X9 581 aa6.74□□□□□ -1.33
DDX41-216ENST00000513562 LINC00474Q9P2X8 69 aa6.74□□□□□ -1.33
DDX41-216ENST00000513562 CFAP161Q6P656 301 aa6.73□□□□□ -1.33
DDX41-216ENST00000513562 OR10AG1Q8NH19 301 aa6.73□□□□□ -1.33
DDX41-216ENST00000513562 ZFP30Q9Y2G7 519 aa6.73□□□□□ -1.33
DDX41-216ENST00000513562 SSNA1O43805 119 aa6.72□□□□□ -1.33
DDX41-216ENST00000513562 HIGD2BQ4VC39 106 aa6.72□□□□□ -1.33
DDX41-216ENST00000513562 ZNF664Q8N3J9 261 aa6.72□□□□□ -1.33
DDX41-216ENST00000513562 HIST1H2BAQ96A08 127 aa6.72□□□□□ -1.33
DDX41-216ENST00000513562 AQP10Q96PS8 301 aa6.72□□□□□ -1.33
DDX41-216ENST00000513562 GVQW2A0A096LPI5 108 aaPredicted RBP6.71□□□□□ -1.34
DDX41-216ENST00000513562 GAGE12HA6NDE8 117 aa6.71□□□□□ -1.34
DDX41-216ENST00000513562 F5H697 171 aa6.71□□□□□ -1.34
DDX41-216ENST00000513562 MBP02144 154 aa6.71□□□□□ -1.34
DDX41-216ENST00000513562 INO80EQ8NBZ0 244 aaPredicted RBP6.71□□□□□ -1.34
DDX41-216ENST00000513562 PSMG3Q9BT73 122 aaPredicted RBP6.71□□□□□ -1.34
DDX41-216ENST00000513562 ZNF471Q9BX82 626 aaPredicted RBP6.71□□□□□ -1.34
DDX41-216ENST00000513562 PSORS1C2Q9UIG4 136 aa6.71□□□□□ -1.34
DDX41-216ENST00000513562 ALG5Q9Y673 324 aa6.71□□□□□ -1.34
DDX41-216ENST00000513562 SNAI2O43623 268 aa6.7□□□□□ -1.34
DDX41-216ENST00000513562 LTAP01374 205 aa6.7□□□□□ -1.34
DDX41-216ENST00000513562 CXCL1P09341 107 aa6.7□□□□□ -1.34
DDX41-216ENST00000513562 ATP6V0CP27449 155 aa6.7□□□□□ -1.34
DDX41-216ENST00000513562 SULT1A2P50226 295 aa6.7□□□□□ -1.34
DDX41-216ENST00000513562 FMC1Q96HJ9 113 aa6.7□□□□□ -1.34
DDX41-216ENST00000513562 TMEM243Q9BU79 118 aa6.7□□□□□ -1.34
DDX41-216ENST00000513562 SSBP4Q9BWG4 385 aaPredicted RBP6.7□□□□□ -1.34
DDX41-216ENST00000513562 ACTR3CQ9C0K3 210 aaPredicted RBP6.7□□□□□ -1.34
DDX41-216ENST00000513562 TRAV26-2A0A0B4J265 109 aa6.69□□□□□ -1.34
DDX41-216ENST00000513562 FAM74A7A6NL05 159 aa6.69□□□□□ -1.34
DDX41-216ENST00000513562 UBE2G2P60604 165 aa6.69□□□□□ -1.34
DDX41-216ENST00000513562 SERF2P84101 59 aa6.69□□□□□ -1.34
DDX41-216ENST00000513562 NKX6-2Q9C056 277 aaPredicted RBP6.69□□□□□ -1.34
DDX41-216ENST00000513562 MED28Q9H204 178 aa6.69□□□□□ -1.34
DDX41-216ENST00000513562 PKIGQ9Y2B9 76 aa6.69□□□□□ -1.34
DDX41-216ENST00000513562 MUC21A0A140T8X8 626 aa6.68□□□□□ -1.34
DDX41-216ENST00000513562 M0QY20 66 aa6.68□□□□□ -1.34
DDX41-216ENST00000513562 OR5AL1P0C617 328 aa6.68□□□□□ -1.34
DDX41-216ENST00000513562 UBE2G1P62253 170 aa6.68□□□□□ -1.34
DDX41-216ENST00000513562 CACNG7P62955 275 aa6.68□□□□□ -1.34
DDX41-216ENST00000513562 SPANXN1Q5VSR9 72 aa6.68□□□□□ -1.34
DDX41-216ENST00000513562 AP1S3Q96PC3 154 aa6.68□□□□□ -1.34
DDX41-216ENST00000513562 TNFSF18Q9UNG2 199 aa6.68□□□□□ -1.34
DDX41-216ENST00000513562 hCG_2014768A0A024R1R8 64 aa6.67□□□□□ -1.34
DDX41-216ENST00000513562 SMIM17P0DL12 118 aa6.67□□□□□ -1.34
DDX41-216ENST00000513562 ZNF726P1Q15940 193 aa6.67□□□□□ -1.34
DDX41-216ENST00000513562 Q6ZNX1 250 aa6.67□□□□□ -1.34
DDX41-216ENST00000513562 PRR26Q8N8Z3 221 aa6.67□□□□□ -1.34
DDX41-216ENST00000513562 PGLYRP4Q96LB8 373 aa6.67□□□□□ -1.34
DDX41-216ENST00000513562 UBE2L6O14933 153 aa6.66□□□□□ -1.34
DDX41-216ENST00000513562 CHCHD10Q8WYQ3 142 aaPredicted RBP6.66□□□□□ -1.34
DDX41-216ENST00000513562 IGKV3OR2-268A0A0C4DH90 116 aa6.65□□□□□ -1.34
DDX41-216ENST00000513562 CTXND1A0A1B0GTU2 59 aa6.65□□□□□ -1.34
DDX41-216ENST00000513562 NKX2-5P52952 324 aaPredicted RBP6.65□□□□□ -1.34
DDX41-216ENST00000513562 PRR4Q16378 134 aa6.65□□□□□ -1.34
DDX41-216ENST00000513562 SUMO4Q6EEV6 95 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms