RNA–Protein interactions for RNA: ENST00000513205.5

PPARGC1A-211, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-211ENST00000513205 Q6ZN92 141 aa6.28□□□□□ -1.4
PPARGC1A-211ENST00000513205 C11orf44Q8N8P7 122 aa6.28□□□□□ -1.4
PPARGC1A-211ENST00000513205 DNAJC30Q96LL9 226 aa6.28□□□□□ -1.4
PPARGC1A-211ENST00000513205 LINC01587Q99440 93 aa6.28□□□□□ -1.4
PPARGC1A-211ENST00000513205 CYSLTR1Q9Y271 337 aa6.28□□□□□ -1.4
PPARGC1A-211ENST00000513205 VPS13CQ709C8 3753 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 RBMY1BA6NDE4 496 aaKnown RBP6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 RBMY1EA6NEQ0 496 aaKnown RBP6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 INAFM1C9JVW0 142 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 M0QY20 66 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 DLEU1O43261 78 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 RBMY1DP0C7P1 496 aaKnown RBP6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 GATA1P15976 413 aaPredicted RBP6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 NSUN5P1Q3KNT7 163 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 C9orf66Q5T8R8 295 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 SLC25A34Q6PIV7 304 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 LINC00173Q6ZV60 143 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 ERASQ7Z444 233 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 LINC00482Q8N8I6 264 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 TMEM263Q8WUH6 116 aaKnown RBP6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 TMEM141Q96I45 108 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 SMR3AQ99954 134 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 TMEM208Q9BTX3 173 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 CSTL1Q9H114 145 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 SELENOKQ9Y6D0 94 aa6.27□□□□□ -1.41
PPARGC1A-211ENST00000513205 NIPBLQ6KC79 2804 aaeCLIP6.26□□□□□ -1.41
PPARGC1A-211ENST00000513205 SDHAF1A6NFY7 115 aa6.26□□□□□ -1.41
PPARGC1A-211ENST00000513205 DPM2O94777 84 aa6.26□□□□□ -1.41
PPARGC1A-211ENST00000513205 GAS8-AS1O95177 125 aa6.26□□□□□ -1.41
PPARGC1A-211ENST00000513205 PRSS1P07477 247 aa6.26□□□□□ -1.41
PPARGC1A-211ENST00000513205 ODF1Q14990 250 aa6.26□□□□□ -1.41
PPARGC1A-211ENST00000513205 FAM74A4Q5TZK3 123 aa6.26□□□□□ -1.41
PPARGC1A-211ENST00000513205 GTSCR1Q86UQ5 136 aa6.26□□□□□ -1.41
PPARGC1A-211ENST00000513205 C11orf72Q8NBR9 251 aa6.26□□□□□ -1.41
PPARGC1A-211ENST00000513205 C16orf74Q96GX8 76 aa6.26□□□□□ -1.41
PPARGC1A-211ENST00000513205 TIMM17AQ99595 171 aa6.26□□□□□ -1.41
PPARGC1A-211ENST00000513205 ZMAT4Q9H898 229 aa6.26□□□□□ -1.41
PPARGC1A-211ENST00000513205 A0A087WWL8 130 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 A0A087WX48 190 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 I3L3M4 83 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 SIVA1O15304 175 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 IGKCP01834 107 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 RBMY1A1P0DJD3 496 aaKnown RBP6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 RBMY1CP0DJD4 496 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 COX8AP10176 69 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 CRYBA4P53673 196 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 RBMY1FQ15415 496 aaKnown RBP6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 C2orf66Q6UXQ4 117 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 ATOH7Q8N100 152 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 IL17DQ8TAD2 202 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 RPL39LQ96EH5 51 aaKnown RBP6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 SCGB3A1Q96QR1 104 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 SVEP1Q4LDE5 3571 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 F8VRH5 84 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 H0Y8G0 127 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 SMAGPQ0VAQ4 97 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 DAZ2Q13117 558 aaKnown RBP6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 UFSP1Q6NVU6 142 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 C12orf54Q6X4T0 127 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 RNASE8Q8TDE3 154 aaKnown RBP6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 CITED1Q99966 193 aa6.25□□□□□ -1.41
PPARGC1A-211ENST00000513205 FLNAP21333 2647 aaKnown RBP6.24□□□□□ -1.41
PPARGC1A-211ENST00000513205 TRBV10-1A0A0K0K1A3 114 aa6.24□□□□□ -1.41
PPARGC1A-211ENST00000513205 RS1O15537 224 aa6.24□□□□□ -1.41
PPARGC1A-211ENST00000513205 IGHV3-53P01767 116 aa6.24□□□□□ -1.41
PPARGC1A-211ENST00000513205 FXYD7P58549 80 aa6.24□□□□□ -1.41
PPARGC1A-211ENST00000513205 C18orf15Q96N68 181 aa6.24□□□□□ -1.41
PPARGC1A-211ENST00000513205 XCL2Q9UBD3 114 aa6.24□□□□□ -1.41
PPARGC1A-211ENST00000513205 MAP1AP78559 2803 aaPredicted RBP6.23□□□□□ -1.41
PPARGC1A-211ENST00000513205 ZANQ9Y493 2812 aa6.23□□□□□ -1.41
PPARGC1A-211ENST00000513205 DNHD1Q96M86 4753 aa6.23□□□□□ -1.41
PPARGC1A-211ENST00000513205 HIVEP2P31629 2446 aa6.23□□□□□ -1.41
PPARGC1A-211ENST00000513205 hDV102S1A0JD36 115 aa6.23□□□□□ -1.41
PPARGC1A-211ENST00000513205 HTN1P15515 57 aa6.23□□□□□ -1.41
PPARGC1A-211ENST00000513205 KRTAP21-3Q3LHN1 58 aa6.23□□□□□ -1.41
PPARGC1A-211ENST00000513205 COL5A1-AS1Q5SY13 56 aa6.23□□□□□ -1.41
PPARGC1A-211ENST00000513205 CFAP126Q5VTH2 177 aa6.23□□□□□ -1.41
PPARGC1A-211ENST00000513205 C1orf158Q8N1D5 194 aa6.23□□□□□ -1.41
PPARGC1A-211ENST00000513205 NEXN-AS1Q8NBZ9 246 aa6.23□□□□□ -1.41
PPARGC1A-211ENST00000513205 SNHG12Q9BXW3 62 aa6.23□□□□□ -1.41
PPARGC1A-211ENST00000513205 TNFRSF18Q9Y5U5 241 aa6.23□□□□□ -1.41
PPARGC1A-211ENST00000513205 MXRA5Q9NR99 2828 aa6.22□□□□□ -1.41
PPARGC1A-211ENST00000513205 TRAV4A0A0B4J268 109 aa6.22□□□□□ -1.41
PPARGC1A-211ENST00000513205 SMIM9A6NGZ8 99 aa6.22□□□□□ -1.41
PPARGC1A-211ENST00000513205 RRN3P1Q2M238 152 aa6.22□□□□□ -1.41
PPARGC1A-211ENST00000513205 BOD1L2Q8IYS8 172 aa6.22□□□□□ -1.41
PPARGC1A-211ENST00000513205 JPT2Q9H910 190 aa6.22□□□□□ -1.41
PPARGC1A-211ENST00000513205 ZMAT5Q9UDW3 170 aaKnown RBP6.22□□□□□ -1.41
PPARGC1A-211ENST00000513205 TP53TG1Q9Y2A0 90 aa6.22□□□□□ -1.41
PPARGC1A-211ENST00000513205 PYGO1Q9Y3Y4 419 aa6.22□□□□□ -1.41
PPARGC1A-211ENST00000513205 IGIPA6NJ69 53 aa6.21□□□□□ -1.42
PPARGC1A-211ENST00000513205 AZU1P20160 251 aa6.21□□□□□ -1.42
PPARGC1A-211ENST00000513205 PMVKQ15126 192 aa6.21□□□□□ -1.42
PPARGC1A-211ENST00000513205 MAJINQ3KP22 176 aa6.21□□□□□ -1.42
PPARGC1A-211ENST00000513205 TMEM97Q5BJF2 176 aa6.21□□□□□ -1.42
PPARGC1A-211ENST00000513205 KIR2DL5BQ8NHK3 375 aa6.21□□□□□ -1.42
PPARGC1A-211ENST00000513205 OVOL2Q9BRP0 275 aa6.21□□□□□ -1.42
PPARGC1A-211ENST00000513205 HHLA3Q9XRX5 114 aa6.21□□□□□ -1.42
PPARGC1A-211ENST00000513205 CHTOPQ9Y3Y2 248 aaKnown RBP6.21□□□□□ -1.42
PPARGC1A-211ENST00000513205 KRTAP10-3P60369 221 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms