RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 ZNF702PQ9H963 129 aa9.89□□□□□ -0.83
PCDHA4-202ENST00000512229 PGPEP1Q9NXJ5 209 aa9.89□□□□□ -0.83
PCDHA4-202ENST00000512229 COX11Q9Y6N1 276 aa9.89□□□□□ -0.83
PCDHA4-202ENST00000512229 J3QQQ9 107 aa9.89□□□□□ -0.83
PCDHA4-202ENST00000512229 PIFOQ8TCI5 191 aa9.89□□□□□ -0.83
PCDHA4-202ENST00000512229 NDUFA12Q9UI09 145 aa9.89□□□□□ -0.83
PCDHA4-202ENST00000512229 TRAV8-2A0A0B4J237 113 aa9.88□□□□□ -0.83
PCDHA4-202ENST00000512229 ZFAND2AQ8N6M9 145 aa9.88□□□□□ -0.83
PCDHA4-202ENST00000512229 BBC3Q96PG8 261 aaPredicted RBP9.88□□□□□ -0.83
PCDHA4-202ENST00000512229 A0A096LPF7 62 aa9.88□□□□□ -0.83
PCDHA4-202ENST00000512229 DNAJC30Q96LL9 226 aa9.88□□□□□ -0.83
PCDHA4-202ENST00000512229 ZNF292O60281 2723 aa9.88□□□□□ -0.83
PCDHA4-202ENST00000512229 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.88□□□□□ -0.83
PCDHA4-202ENST00000512229 IGKV2-29A2NJV5 120 aaPredicted RBP9.88□□□□□ -0.83
PCDHA4-202ENST00000512229 H3BMM0 161 aa9.88□□□□□ -0.83
PCDHA4-202ENST00000512229 UBE2V1Q13404 147 aa9.88□□□□□ -0.83
PCDHA4-202ENST00000512229 ODF3Q96PU9 254 aa9.88□□□□□ -0.83
PCDHA4-202ENST00000512229 PCP2Q8IVA1 136 aa9.87□□□□□ -0.83
PCDHA4-202ENST00000512229 PLA2G2AP14555 144 aa9.87□□□□□ -0.83
PCDHA4-202ENST00000512229 ANKRD39Q53RE8 183 aa9.87□□□□□ -0.83
PCDHA4-202ENST00000512229 GATD1Q8NB37 220 aa9.87□□□□□ -0.83
PCDHA4-202ENST00000512229 INSL3P51460 131 aa9.86□□□□□ -0.83
PCDHA4-202ENST00000512229 INAFM1C9JVW0 142 aa9.86□□□□□ -0.83
PCDHA4-202ENST00000512229 SPANXA1Q9NS26 97 aa9.86□□□□□ -0.83
PCDHA4-202ENST00000512229 HERVK_113P63121 156 aa9.86□□□□□ -0.83
PCDHA4-202ENST00000512229 SIVA1O15304 175 aa9.85□□□□□ -0.83
PCDHA4-202ENST00000512229 BVES-AS1Q5T3Y7 98 aa9.85□□□□□ -0.83
PCDHA4-202ENST00000512229 A0A0J9YY99 117 aa9.85□□□□□ -0.83
PCDHA4-202ENST00000512229 BOD1L1Q8NFC6 3051 aa9.85□□□□□ -0.83
PCDHA4-202ENST00000512229 RPL39P62891 51 aaKnown RBP9.85□□□□□ -0.83
PCDHA4-202ENST00000512229 S100A7L2Q5SY68 101 aa9.85□□□□□ -0.83
PCDHA4-202ENST00000512229 LEPROTO15243 131 aa9.84□□□□□ -0.83
PCDHA4-202ENST00000512229 LINC01006Q8NI28 216 aa9.84□□□□□ -0.83
PCDHA4-202ENST00000512229 DSPP15924 2871 aaKnown RBP9.84□□□□□ -0.83
PCDHA4-202ENST00000512229 TP53TG3Q9ULZ0 132 aa9.84□□□□□ -0.83
PCDHA4-202ENST00000512229 ANGP03950 147 aaKnown RBP9.84□□□□□ -0.83
PCDHA4-202ENST00000512229 UBE2DNLQ8IWF7 75 aa9.84□□□□□ -0.83
PCDHA4-202ENST00000512229 A0A0J9YXV3 536 aa9.83□□□□□ -0.84
PCDHA4-202ENST00000512229 TRBV7-3A0A075B6L6 115 aa9.83□□□□□ -0.84
PCDHA4-202ENST00000512229 F8W735 103 aaPredicted RBP9.83□□□□□ -0.84
PCDHA4-202ENST00000512229 K7EQD1 137 aa9.83□□□□□ -0.84
PCDHA4-202ENST00000512229 SPART-AS1P0CW21 52 aa9.83□□□□□ -0.84
PCDHA4-202ENST00000512229 DAZ2Q13117 558 aaKnown RBP9.83□□□□□ -0.84
PCDHA4-202ENST00000512229 TAL2Q16559 108 aa9.83□□□□□ -0.84
PCDHA4-202ENST00000512229 DAZ4Q86SG3 579 aaKnown RBP9.83□□□□□ -0.84
PCDHA4-202ENST00000512229 NDUFA11Q86Y39 141 aa9.83□□□□□ -0.84
PCDHA4-202ENST00000512229 TMEM263Q8WUH6 116 aaKnown RBP9.83□□□□□ -0.84
PCDHA4-202ENST00000512229 DAZ3Q9NR90 486 aaKnown RBP9.83□□□□□ -0.84
PCDHA4-202ENST00000512229 MRPS12O15235 138 aaKnown RBP9.82□□□□□ -0.84
PCDHA4-202ENST00000512229 SLC25A20O43772 301 aa9.82□□□□□ -0.84
PCDHA4-202ENST00000512229 CRIP2P52943 208 aaPredicted RBP9.82□□□□□ -0.84
PCDHA4-202ENST00000512229 MRGPRG-AS1Q2M3A8 158 aa9.82□□□□□ -0.84
PCDHA4-202ENST00000512229 CRLF1O75462 422 aa9.82□□□□□ -0.84
PCDHA4-202ENST00000512229 SPINK8P0C7L1 97 aa9.82□□□□□ -0.84
PCDHA4-202ENST00000512229 GYPEP15421 78 aa9.82□□□□□ -0.84
PCDHA4-202ENST00000512229 PFN2P35080 140 aa9.82□□□□□ -0.84
PCDHA4-202ENST00000512229 TET2Q6N021 2002 aaPredicted RBP9.82□□□□□ -0.84
PCDHA4-202ENST00000512229 DEFB135Q30KP9 77 aa9.82□□□□□ -0.84
PCDHA4-202ENST00000512229 DEFB125Q8N687 156 aa9.82□□□□□ -0.84
PCDHA4-202ENST00000512229 TIMM17AQ99595 171 aa9.82□□□□□ -0.84
PCDHA4-202ENST00000512229 ATP5G1P05496 136 aa9.81□□□□□ -0.84
PCDHA4-202ENST00000512229 ATP6V0E2Q8NHE4 81 aa9.81□□□□□ -0.84
PCDHA4-202ENST00000512229 TOMM6Q96B49 74 aa9.81□□□□□ -0.84
PCDHA4-202ENST00000512229 LY6G6DO95868 133 aa9.81□□□□□ -0.84
PCDHA4-202ENST00000512229 ATXN8Q156A1 80 aa9.81□□□□□ -0.84
PCDHA4-202ENST00000512229 SPATA12Q7Z6I5 190 aa9.81□□□□□ -0.84
PCDHA4-202ENST00000512229 C9orf118A6NHY6 69 aa9.81□□□□□ -0.84
PCDHA4-202ENST00000512229 HIST2H2BDQ6DRA6 164 aa9.81□□□□□ -0.84
PCDHA4-202ENST00000512229 CEND1Q8N111 149 aa9.81□□□□□ -0.84
PCDHA4-202ENST00000512229 ODF1Q14990 250 aa9.8□□□□□ -0.84
PCDHA4-202ENST00000512229 TRAV12-1A0A0B4J245 112 aa9.8□□□□□ -0.84
PCDHA4-202ENST00000512229 ZNF124Q15973 351 aa9.8□□□□□ -0.84
PCDHA4-202ENST00000512229 GHRHP01286 108 aa9.8□□□□□ -0.84
PCDHA4-202ENST00000512229 C18orf65Q6ZTR6 163 aa9.8□□□□□ -0.84
PCDHA4-202ENST00000512229 HILS1P60008 231 aa9.79□□□□□ -0.84
PCDHA4-202ENST00000512229 C20orf203Q8NBC4 194 aa9.79□□□□□ -0.84
PCDHA4-202ENST00000512229 BAALCQ8WXS3 180 aa9.79□□□□□ -0.84
PCDHA4-202ENST00000512229 C11orf21Q9P2W6 132 aa9.79□□□□□ -0.84
PCDHA4-202ENST00000512229 CLPSL2Q6UWE3 100 aa9.79□□□□□ -0.84
PCDHA4-202ENST00000512229 DCANP1Q8TF63 244 aa9.79□□□□□ -0.84
PCDHA4-202ENST00000512229 TTTY13Q9BZ97 58 aa9.79□□□□□ -0.84
PCDHA4-202ENST00000512229 HHLA3Q9XRX5 114 aa9.79□□□□□ -0.84
PCDHA4-202ENST00000512229 MUC3AQ02505 3323 aa9.79□□□□□ -0.84
PCDHA4-202ENST00000512229 TRBV10-1A0A0K0K1A3 114 aa9.78□□□□□ -0.84
PCDHA4-202ENST00000512229 FGF6P10767 208 aa9.78□□□□□ -0.84
PCDHA4-202ENST00000512229 ZNF561-AS1K7EIQ3 104 aa9.78□□□□□ -0.84
PCDHA4-202ENST00000512229 MRPL23Q16540 153 aaKnown RBP9.78□□□□□ -0.84
PCDHA4-202ENST00000512229 SCRT2Q9NQ03 307 aa9.78□□□□□ -0.84
PCDHA4-202ENST00000512229 ESM1Q9NQ30 184 aa9.78□□□□□ -0.84
PCDHA4-202ENST00000512229 MRAPQ8TCY5 172 aa9.78□□□□□ -0.84
PCDHA4-202ENST00000512229 CST9LQ9H4G1 147 aa9.78□□□□□ -0.84
PCDHA4-202ENST00000512229 PRO1854Q9UHT4 67 aa9.78□□□□□ -0.84
PCDHA4-202ENST00000512229 XCL1P47992 114 aa9.77□□□□□ -0.85
PCDHA4-202ENST00000512229 PRR9Q5T870 116 aa9.77□□□□□ -0.85
PCDHA4-202ENST00000512229 LURAP1LQ8IV03 231 aa9.77□□□□□ -0.85
PCDHA4-202ENST00000512229 HECTD1Q9ULT8 2610 aa9.77□□□□□ -0.85
PCDHA4-202ENST00000512229 KLLNB2CW77 178 aa9.77□□□□□ -0.85
PCDHA4-202ENST00000512229 DEFB4AO15263 64 aa9.77□□□□□ -0.85
PCDHA4-202ENST00000512229 Q6ZTI0 123 aa9.77□□□□□ -0.85
PCDHA4-202ENST00000512229 BRI3O95415 125 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms