RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 NAV2Q8IVL1 2488 aa0.52□□□□□ -2.33
PDGFC-207ENST00000511985 TRBV7-1A0A0A6YYK4 115 aa0.52□□□□□ -2.33
PDGFC-207ENST00000511985 SIX6O95475 246 aa0.52□□□□□ -2.33
PDGFC-207ENST00000511985 PRH1P02810 166 aa0.52□□□□□ -2.33
PDGFC-207ENST00000511985 S100PP25815 95 aa0.52□□□□□ -2.33
PDGFC-207ENST00000511985 GNG4P50150 75 aa0.52□□□□□ -2.33
PDGFC-207ENST00000511985 S100A7L2Q5SY68 101 aa0.52□□□□□ -2.33
PDGFC-207ENST00000511985 FAM74A4Q5TZK3 123 aa0.52□□□□□ -2.33
PDGFC-207ENST00000511985 C8orf59Q8N0T1 100 aaPredicted RBP0.52□□□□□ -2.33
PDGFC-207ENST00000511985 SPTSSBQ8NFR3 76 aa0.52□□□□□ -2.33
PDGFC-207ENST00000511985 FAM103A1Q9BTL3 118 aaKnown RBP0.52□□□□□ -2.33
PDGFC-207ENST00000511985 HCG22E2RYF7 251 aa0.51□□□□□ -2.33
PDGFC-207ENST00000511985 LY6G6CO95867 125 aa0.51□□□□□ -2.33
PDGFC-207ENST00000511985 HELZP42694 1942 aaKnown RBP0.51□□□□□ -2.33
PDGFC-207ENST00000511985 TPPP2P59282 170 aa0.51□□□□□ -2.33
PDGFC-207ENST00000511985 RBM3P98179 157 aaKnown RBP0.51□□□□□ -2.33
PDGFC-207ENST00000511985 CATR1Q13166 79 aa0.51□□□□□ -2.33
PDGFC-207ENST00000511985 INSL4Q14641 139 aa0.51□□□□□ -2.33
PDGFC-207ENST00000511985 MRPL54Q6P161 138 aaKnown RBP0.51□□□□□ -2.33
PDGFC-207ENST00000511985 KCPQ6ZWJ8 1503 aa0.51□□□□□ -2.33
PDGFC-207ENST00000511985 DSCR8Q96T75 97 aa0.51□□□□□ -2.33
PDGFC-207ENST00000511985 FAM135AQ9P2D6 1515 aa0.51□□□□□ -2.33
PDGFC-207ENST00000511985 CDK5RAP2Q96SN8 1893 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 LOC285556D6RIA3 1793 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 KDM6BO15054 1643 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 EIF4G3O43432 1585 aaKnown RBP0.5□□□□□ -2.33
PDGFC-207ENST00000511985 MYOM2P54296 1465 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 CASKIN1Q8WXD9 1431 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 KTN1Q86UP2 1357 aaKnown RBP0.5□□□□□ -2.33
PDGFC-207ENST00000511985 TRAV13-2A0A0B4J235 113 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 OOSP1A8MZH6 123 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 SNAPC5O75971 98 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 EDDM3BP56851 147 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 PPP3R1P63098 170 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 C5orf38Q86SI9 138 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 Q96NJ1 140 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 SMR3AQ99954 134 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 LINC00312Q9Y6C7 94 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 V9GYV3 84 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 PHLPP1O60346 1717 aa0.5□□□□□ -2.33
PDGFC-207ENST00000511985 PXDNQ92626 1479 aa0.49□□□□□ -2.33
PDGFC-207ENST00000511985 SSSCA1O60232 199 aa0.49□□□□□ -2.33
PDGFC-207ENST00000511985 S100A1P23297 94 aa0.49□□□□□ -2.33
PDGFC-207ENST00000511985 C9orf153Q5TBE3 101 aa0.49□□□□□ -2.33
PDGFC-207ENST00000511985 WFDC6Q9BQY6 131 aa0.49□□□□□ -2.33
PDGFC-207ENST00000511985 TCEAL7Q9BRU2 100 aa0.49□□□□□ -2.33
PDGFC-207ENST00000511985 CYP4F30PQ9H0H9 118 aa0.49□□□□□ -2.33
PDGFC-207ENST00000511985 NALCNQ8IZF0 1738 aa0.49□□□□□ -2.33
PDGFC-207ENST00000511985 ZNF142P52746 1687 aaPredicted RBP0.49□□□□□ -2.33
PDGFC-207ENST00000511985 RREB1Q92766 1687 aa0.49□□□□□ -2.33
PDGFC-207ENST00000511985 MYH1P12882 1939 aa0.48□□□□□ -2.33
PDGFC-207ENST00000511985 CPSF1Q10570 1443 aaKnown RBP0.48□□□□□ -2.33
PDGFC-207ENST00000511985 LAMB1P07942 1786 aa0.48□□□□□ -2.33
PDGFC-207ENST00000511985 DLEC1Q9Y238 1755 aa0.48□□□□□ -2.33
PDGFC-207ENST00000511985 C20orf202A1L168 122 aa0.48□□□□□ -2.33
PDGFC-207ENST00000511985 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.48□□□□□ -2.33
PDGFC-207ENST00000511985 COMMD6Q7Z4G1 85 aa0.48□□□□□ -2.33
PDGFC-207ENST00000511985 C14orf144Q96I85 54 aa0.48□□□□□ -2.33
PDGFC-207ENST00000511985 AQP10Q96PS8 301 aa0.48□□□□□ -2.33
PDGFC-207ENST00000511985 QRICH2Q9H0J4 1663 aa0.48□□□□□ -2.33
PDGFC-207ENST00000511985 ATG2AQ2TAZ0 1938 aa0.48□□□□□ -2.33
PDGFC-207ENST00000511985 PZPP20742 1482 aa0.48□□□□□ -2.33
PDGFC-207ENST00000511985 GVQW2A0A096LPI5 108 aaPredicted RBP0.47□□□□□ -2.33
PDGFC-207ENST00000511985 FAM24AA6NFZ4 105 aa0.47□□□□□ -2.33
PDGFC-207ENST00000511985 IFITM1P13164 125 aa0.47□□□□□ -2.33
PDGFC-207ENST00000511985 C10orf128Q5T292 105 aa0.47□□□□□ -2.33
PDGFC-207ENST00000511985 Q5VV11 94 aa0.47□□□□□ -2.33
PDGFC-207ENST00000511985 SVBPQ8N300 66 aa0.47□□□□□ -2.33
PDGFC-207ENST00000511985 C12orf57Q99622 126 aa0.47□□□□□ -2.33
PDGFC-207ENST00000511985 BPESC1Q9GZL8 116 aa0.47□□□□□ -2.33
PDGFC-207ENST00000511985 DPH3P1Q9H4G8 78 aa0.47□□□□□ -2.33
PDGFC-207ENST00000511985 SCP2D1Q9UJQ7 156 aa0.47□□□□□ -2.33
PDGFC-207ENST00000511985 LENEPQ9Y5L5 61 aa0.47□□□□□ -2.33
PDGFC-207ENST00000511985 SPAG17Q6Q759 2223 aa0.47□□□□□ -2.33
PDGFC-207ENST00000511985 TRPM7Q96QT4 1865 aa0.47□□□□□ -2.33
PDGFC-207ENST00000511985 MAPKBP1O60336 1514 aa0.47□□□□□ -2.33
PDGFC-207ENST00000511985 CDK13Q14004 1512 aaKnown RBP0.47□□□□□ -2.33
PDGFC-207ENST00000511985 PPIP5K1Q6PFW1 1433 aa0.47□□□□□ -2.33
PDGFC-207ENST00000511985 RIMS1Q86UR5 1692 aaKnown RBP0.46□□□□□ -2.34
PDGFC-207ENST00000511985 AKAP11Q9UKA4 1901 aa0.46□□□□□ -2.34
PDGFC-207ENST00000511985 PLXNA2O75051 1894 aa0.46□□□□□ -2.34
PDGFC-207ENST00000511985 BDP1A6H8Y1 2624 aa0.46□□□□□ -2.34
PDGFC-207ENST00000511985 TRGV1A0A0A0MS02 117 aa0.46□□□□□ -2.34
PDGFC-207ENST00000511985 UBE2L5PA0A1B0GUS4 154 aa0.46□□□□□ -2.34
PDGFC-207ENST00000511985 F2Z2F3 143 aa0.46□□□□□ -2.34
PDGFC-207ENST00000511985 ATP6V1G2-DDX39BF2Z307 99 aa0.46□□□□□ -2.34
PDGFC-207ENST00000511985 ATP5EP56381 51 aaPredicted RBP0.46□□□□□ -2.34
PDGFC-207ENST00000511985 UBE2L3P68036 154 aaKnown RBP0.46□□□□□ -2.34
PDGFC-207ENST00000511985 HSD52Q0P140 79 aa0.46□□□□□ -2.34
PDGFC-207ENST00000511985 VMO1Q7Z5L0 202 aa0.46□□□□□ -2.34
PDGFC-207ENST00000511985 TTC9CQ8N5M4 171 aa0.46□□□□□ -2.34
PDGFC-207ENST00000511985 SMIM11BQ8TCY0 68 aa0.46□□□□□ -2.34
PDGFC-207ENST00000511985 C10orf71Q711Q0 1435 aa0.46□□□□□ -2.34
PDGFC-207ENST00000511985 LRRC37A3O60309 1634 aa0.46□□□□□ -2.34
PDGFC-207ENST00000511985 FOCADQ5VW36 1801 aa0.45□□□□□ -2.34
PDGFC-207ENST00000511985 VIRMAQ69YN4 1812 aaKnown RBP0.45□□□□□ -2.34
PDGFC-207ENST00000511985 MUC22E2RYF6 1773 aaPredicted RBP0.45□□□□□ -2.34
PDGFC-207ENST00000511985 TRBV7-3A0A075B6L6 115 aa0.45□□□□□ -2.34
PDGFC-207ENST00000511985 TMEM14DPA8MWL7 114 aa0.45□□□□□ -2.34
PDGFC-207ENST00000511985 H3BQ15 152 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms