RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 H0Y9P7 68 aa2.69□□□□□ -1.98
USP53-205ENST00000509769 DEFB131AP59861 70 aa2.69□□□□□ -1.98
USP53-205ENST00000509769 ZFAND2AQ8N6M9 145 aa2.69□□□□□ -1.98
USP53-205ENST00000509769 SPRR3Q9UBC9 169 aa2.69□□□□□ -1.98
USP53-205ENST00000509769 PSPHP1O15172 72 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 HTN3P15516 51 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 WT1P19544 449 aaPredicted RBP2.68□□□□□ -1.98
USP53-205ENST00000509769 PLXNA4Q9HCM2 1894 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 RALGAPA1Q6GYQ0 2036 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 PDCD11Q14690 1871 aaKnown RBP2.68□□□□□ -1.98
USP53-205ENST00000509769 TRAV10A0A0B4J240 114 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 B4DSR2 109 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 LHBP01229 141 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 KLKP1Q107X0 134 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 C7orf69Q9H7B7 122 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 SMCHD1A6NHR9 2005 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 IGLV3-19P01714 112 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 SLURP2P0DP57 97 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 COL5A1P20908 1838 aaPredicted RBP2.68□□□□□ -1.98
USP53-205ENST00000509769 CEP350Q5VT06 3117 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 IGHV3-35A0A0C4DH35 117 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 SPINT4Q6UDR6 99 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 SAP25Q8TEE9 199 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 AJUBAQ96IF1 538 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 ZNF462Q96JM2 2506 aa2.68□□□□□ -1.98
USP53-205ENST00000509769 IGLV4-3A0A075B6K6 122 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.67□□□□□ -1.98
USP53-205ENST00000509769 IGKV1D-17A0A075B6S4 117 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 LOC110117498A0A087WWA1 95 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 IGKV2-29A2NJV5 120 aaPredicted RBP2.67□□□□□ -1.98
USP53-205ENST00000509769 I3L2K1 104 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 IGLV2-8P01709 118 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 IGHV3-11P01762 117 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 WT1-ASQ06250 92 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 C10orf25Q5T742 122 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 Q8IZM0 81 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 CHCHD7Q9BUK0 85 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 ACACBO00763 2458 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 LOC101927531A0A1B0GV80 90 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 SPINK13Q1W4C9 94 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 SPRNQ5BIV9 151 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 C10orf55Q5SWW7 151 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 LYPD5Q6UWN5 251 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 Q8N814 137 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 RPL39LQ96EH5 51 aaKnown RBP2.67□□□□□ -1.98
USP53-205ENST00000509769 AMELXQ99217 191 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 TP53TG3Q9ULZ0 132 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 KIAA1217Q5T5P2 1943 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 CHD8Q9HCK8 2581 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 NYNRINQ9P2P1 1898 aaKnown RBP2.67□□□□□ -1.98
USP53-205ENST00000509769 WDR81Q562E7 1941 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 LOC100131303A0A0U1RQF7 123 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 TRBV6-4A0A1B0GX49 114 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 MCM3APO60318 1980 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 MUC22E2RYF6 1773 aaPredicted RBP2.67□□□□□ -1.98
USP53-205ENST00000509769 IGLV11-55A0A075B6I3 123 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 LINC01546A6NGU7 62 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 C17orf58Q2M2W7 97 aa2.67□□□□□ -1.98
USP53-205ENST00000509769 RNASE13Q5GAN3 156 aaKnown RBP2.67□□□□□ -1.98
USP53-205ENST00000509769 TDRD6O60522 2096 aaKnown RBP2.66□□□□□ -1.98
USP53-205ENST00000509769 OVOL3O00110 214 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 Q6ZR03 302 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 ZNF837Q96EG3 531 aaPredicted RBP2.66□□□□□ -1.98
USP53-205ENST00000509769 CDC42SE1Q9NRR8 79 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 LINC00474Q9P2X8 69 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 MYO9BQ13459 2157 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 IGHV3-53P01767 116 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 SPART-AS1P0CW21 52 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 LINC01547P58512 204 aaPredicted RBP2.66□□□□□ -1.98
USP53-205ENST00000509769 COX8CQ7Z4L0 72 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 GPHB5Q86YW7 130 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 WFDC10BQ8IUB3 73 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 MAPKAPK5-AS1Q8N8E1 139 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 TPSG1Q9NRR2 321 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 PCSK5Q92824 1860 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 FSTL3O95633 263 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 KRTAP27-1Q3LI81 207 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 Q6ZTC4 211 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 SPANXA2-OT1Q8N9U9 137 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 SMIM11BQ8TCY0 68 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 PLA2G2EQ9NZK7 142 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 S4R3C0 116 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 LY6HO94772 140 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 Q6ZQT7 251 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 IL17DQ8TAD2 202 aa2.66□□□□□ -1.98
USP53-205ENST00000509769 ATG2AQ2TAZ0 1938 aa2.65□□□□□ -1.98
USP53-205ENST00000509769 CD24P25063 80 aa2.65□□□□□ -1.98
USP53-205ENST00000509769 LINC00322Q6ZN03 302 aaPredicted RBP2.65□□□□□ -1.98
USP53-205ENST00000509769 C11orf53Q8IXP5 236 aa2.65□□□□□ -1.98
USP53-205ENST00000509769 ZFHX2Q9C0A1 2572 aaPredicted RBP2.65□□□□□ -1.98
USP53-205ENST00000509769 C19orf84I3L1E1 186 aa2.65□□□□□ -1.99
USP53-205ENST00000509769 ATP6V0E1O15342 81 aa2.65□□□□□ -1.99
USP53-205ENST00000509769 MYCNOSP40205 109 aa2.65□□□□□ -1.99
USP53-205ENST00000509769 INSL3P51460 131 aa2.65□□□□□ -1.99
USP53-205ENST00000509769 PRR4Q16378 134 aa2.65□□□□□ -1.99
USP53-205ENST00000509769 Q8N7P7 452 aa2.65□□□□□ -1.99
USP53-205ENST00000509769 TM2D3Q9BRN9 247 aa2.65□□□□□ -1.99
USP53-205ENST00000509769 PRO0255Q9UI72 69 aa2.65□□□□□ -1.99
USP53-205ENST00000509769 IGKV2D-24A0A075B6R9 120 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms