RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 EVI2AP22794 236 aa10.18□□□□□ -0.78
HMGCL-208ENST00000509389 DAZ2Q13117 558 aaKnown RBP10.18□□□□□ -0.78
HMGCL-208ENST00000509389 MRPL51Q4U2R6 128 aaKnown RBP10.18□□□□□ -0.78
HMGCL-208ENST00000509389 SYT8Q8NBV8 401 aa10.18□□□□□ -0.78
HMGCL-208ENST00000509389 RASL10AQ92737 203 aa10.18□□□□□ -0.78
HMGCL-208ENST00000509389 Q0VG73 95 aa10.17□□□□□ -0.78
HMGCL-208ENST00000509389 ZNRF2Q8NHG8 242 aa10.17□□□□□ -0.78
HMGCL-208ENST00000509389 DPH3P1Q9H4G8 78 aa10.17□□□□□ -0.78
HMGCL-208ENST00000509389 NBDYA0A0U1RRE5 68 aa10.16□□□□□ -0.78
HMGCL-208ENST00000509389 PPBPP02775 128 aa10.16□□□□□ -0.78
HMGCL-208ENST00000509389 SRIP30626 198 aa10.16□□□□□ -0.78
HMGCL-208ENST00000509389 ZNF876PQ49A33 203 aa10.16□□□□□ -0.78
HMGCL-208ENST00000509389 OR10J3Q5JRS4 329 aa10.16□□□□□ -0.78
HMGCL-208ENST00000509389 UFSP1Q6NVU6 142 aa10.16□□□□□ -0.78
HMGCL-208ENST00000509389 LINC00612Q8N6U2 182 aa10.16□□□□□ -0.78
HMGCL-208ENST00000509389 TIMM8BQ9Y5J9 83 aaPredicted RBP10.16□□□□□ -0.78
HMGCL-208ENST00000509389 CRYGDP07320 174 aa10.15□□□□□ -0.78
HMGCL-208ENST00000509389 LINC00310P59036 64 aa10.15□□□□□ -0.78
HMGCL-208ENST00000509389 TNP2Q05952 138 aa10.15□□□□□ -0.78
HMGCL-208ENST00000509389 KIAA1644Q3SXP7 199 aa10.15□□□□□ -0.78
HMGCL-208ENST00000509389 SMIM15Q7Z3B0 74 aa10.15□□□□□ -0.78
HMGCL-208ENST00000509389 C18orf32Q8TCD1 76 aa10.15□□□□□ -0.78
HMGCL-208ENST00000509389 NOP10Q9NPE3 64 aaKnown RBP10.15□□□□□ -0.78
HMGCL-208ENST00000509389 LINC00588Q9Y4M8 146 aa10.15□□□□□ -0.78
HMGCL-208ENST00000509389 ABCA13Q86UQ4 5058 aa10.15□□□□□ -0.78
HMGCL-208ENST00000509389 C5orf52A6NGY3 159 aa10.14□□□□□ -0.79
HMGCL-208ENST00000509389 A8MWV9 139 aa10.14□□□□□ -0.79
HMGCL-208ENST00000509389 CCL18P55774 89 aa10.14□□□□□ -0.79
HMGCL-208ENST00000509389 MRAP2Q96G30 205 aa10.14□□□□□ -0.79
HMGCL-208ENST00000509389 LAMTOR2Q9Y2Q5 125 aa10.14□□□□□ -0.79
HMGCL-208ENST00000509389 ESDP10768 282 aa10.14□□□□□ -0.79
HMGCL-208ENST00000509389 ORMDL3Q8N138 153 aa10.14□□□□□ -0.79
HMGCL-208ENST00000509389 C6orf223Q8N319 242 aa10.14□□□□□ -0.79
HMGCL-208ENST00000509389 C14orf178Q8N769 122 aaPredicted RBP10.14□□□□□ -0.79
HMGCL-208ENST00000509389 C18orf15Q96N68 181 aa10.14□□□□□ -0.79
HMGCL-208ENST00000509389 JPT2Q9H910 190 aa10.14□□□□□ -0.79
HMGCL-208ENST00000509389 D6R8Y8 96 aa10.13□□□□□ -0.79
HMGCL-208ENST00000509389 RS1O15537 224 aa10.13□□□□□ -0.79
HMGCL-208ENST00000509389 SSTP61278 116 aa10.13□□□□□ -0.79
HMGCL-208ENST00000509389 NRACQ8N912 160 aa10.13□□□□□ -0.79
HMGCL-208ENST00000509389 SAMD10Q9BYL1 202 aa10.13□□□□□ -0.79
HMGCL-208ENST00000509389 PRSS47A8MTI9 375 aa10.12□□□□□ -0.79
HMGCL-208ENST00000509389 CFAP126Q5VTH2 177 aa10.12□□□□□ -0.79
HMGCL-208ENST00000509389 KRTAP4-5Q9BYR2 181 aa10.12□□□□□ -0.79
HMGCL-208ENST00000509389 MRPL16Q9NX20 251 aaKnown RBP10.12□□□□□ -0.79
HMGCL-208ENST00000509389 RHODO00212 210 aa10.11□□□□□ -0.79
HMGCL-208ENST00000509389 GAS8-AS1O95177 125 aa10.11□□□□□ -0.79
HMGCL-208ENST00000509389 ZFP2Q6ZN57 461 aa10.11□□□□□ -0.79
HMGCL-208ENST00000509389 Q6ZTI0 123 aa10.11□□□□□ -0.79
HMGCL-208ENST00000509389 URB1-AS1Q96HZ7 61 aa10.11□□□□□ -0.79
HMGCL-208ENST00000509389 PRELID3AQ96N28 172 aa10.11□□□□□ -0.79
HMGCL-208ENST00000509389 HSPG2P98160 4391 aa10.1□□□□□ -0.79
HMGCL-208ENST00000509389 TRAV26-1A0A087WT03 109 aa10.1□□□□□ -0.79
HMGCL-208ENST00000509389 C16orf90A8MZG2 172 aa10.1□□□□□ -0.79
HMGCL-208ENST00000509389 NCR2O95944 276 aa10.1□□□□□ -0.79
HMGCL-208ENST00000509389 NPYP01303 97 aa10.1□□□□□ -0.79
HMGCL-208ENST00000509389 HOXA5P20719 270 aa10.1□□□□□ -0.79
HMGCL-208ENST00000509389 CKS2P33552 79 aa10.1□□□□□ -0.79
HMGCL-208ENST00000509389 LRP1BQ9NZR2 4599 aa10.09□□□□□ -0.79
HMGCL-208ENST00000509389 A0A087WWL8 130 aa10.09□□□□□ -0.79
HMGCL-208ENST00000509389 TRAV4A0A0B4J268 109 aa10.09□□□□□ -0.79
HMGCL-208ENST00000509389 GAGE12BA1L429 117 aa10.09□□□□□ -0.79
HMGCL-208ENST00000509389 LINC01546A6NGU7 62 aa10.09□□□□□ -0.79
HMGCL-208ENST00000509389 SMKR1H3BMG3 65 aa10.09□□□□□ -0.79
HMGCL-208ENST00000509389 GAGE7O76087 117 aa10.09□□□□□ -0.79
HMGCL-208ENST00000509389 GAGE12FP0CL80 117 aa10.09□□□□□ -0.79
HMGCL-208ENST00000509389 GAGE12GP0CL81 117 aa10.09□□□□□ -0.79
HMGCL-208ENST00000509389 GAGE12IP0CL82 117 aa10.09□□□□□ -0.79
HMGCL-208ENST00000509389 SMIM17P0DL12 118 aa10.09□□□□□ -0.79
HMGCL-208ENST00000509389 NDUFA6P56556 154 aa10.09□□□□□ -0.79
HMGCL-208ENST00000509389 RPL32P62910 135 aaKnown RBP10.09□□□□□ -0.79
HMGCL-208ENST00000509389 SUMO4Q6EEV6 95 aa10.09□□□□□ -0.79
HMGCL-208ENST00000509389 Q9H8V8 135 aa10.09□□□□□ -0.79
HMGCL-208ENST00000509389 A0A0J9YY99 117 aa10.08□□□□□ -0.8
HMGCL-208ENST00000509389 TRBV6-5A0A0K0K1A5 114 aa10.08□□□□□ -0.8
HMGCL-208ENST00000509389 M0QY20 66 aa10.08□□□□□ -0.8
HMGCL-208ENST00000509389 CIDEAO60543 219 aa10.08□□□□□ -0.8
HMGCL-208ENST00000509389 TNFRSF6BO95407 300 aa10.08□□□□□ -0.8
HMGCL-208ENST00000509389 S100A6P06703 90 aa10.08□□□□□ -0.8
HMGCL-208ENST00000509389 SNRPEP62304 92 aaKnown RBP10.08□□□□□ -0.8
HMGCL-208ENST00000509389 IQCJQ1A5X6 159 aa10.08□□□□□ -0.8
HMGCL-208ENST00000509389 HIST3H2BBQ8N257 126 aa10.08□□□□□ -0.8
HMGCL-208ENST00000509389 TRGV1A0A0A0MS02 117 aa10.07□□□□□ -0.8
HMGCL-208ENST00000509389 TRAV26-2A0A0B4J265 109 aa10.07□□□□□ -0.8
HMGCL-208ENST00000509389 LOC105371267A0A1B0GV96 52 aa10.07□□□□□ -0.8
HMGCL-208ENST00000509389 IFITM10A6NMD0 228 aa10.07□□□□□ -0.8
HMGCL-208ENST00000509389 SERF1AO75920 110 aa10.07□□□□□ -0.8
HMGCL-208ENST00000509389 IGHV3-53P01767 116 aa10.07□□□□□ -0.8
HMGCL-208ENST00000509389 MGPP08493 103 aa10.07□□□□□ -0.8
HMGCL-208ENST00000509389 GATA1P15976 413 aaPredicted RBP10.07□□□□□ -0.8
HMGCL-208ENST00000509389 C20orf78Q9BR46 151 aa10.07□□□□□ -0.8
HMGCL-208ENST00000509389 CDK2AP2O75956 126 aa10.06□□□□□ -0.8
HMGCL-208ENST00000509389 PPP1R17O96001 155 aa10.06□□□□□ -0.8
HMGCL-208ENST00000509389 ESRGQ1W209 222 aa10.06□□□□□ -0.8
HMGCL-208ENST00000509389 FAM74A4Q5TZK3 123 aa10.06□□□□□ -0.8
HMGCL-208ENST00000509389 PACRGQ96M98 296 aaPredicted RBP10.06□□□□□ -0.8
HMGCL-208ENST00000509389 KRTAP1-5Q9BYS1 174 aa10.06□□□□□ -0.8
HMGCL-208ENST00000509389 H3BNG1 76 aa10.05□□□□□ -0.8
HMGCL-208ENST00000509389 NUPR1O60356 82 aa10.05□□□□□ -0.8
HMGCL-208ENST00000509389 CHCHD1Q96BP2 118 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms