RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 CENPXA8MT69 81 aa6.78□□□□□ -1.32
NEDD9-212ENST00000508800 KRBOX1C9JBD0 128 aa6.78□□□□□ -1.32
NEDD9-212ENST00000508800 H0Y9J4 135 aa6.78□□□□□ -1.32
NEDD9-212ENST00000508800 UBE2D1P51668 147 aa6.78□□□□□ -1.32
NEDD9-212ENST00000508800 IL15RAQ13261 267 aa6.78□□□□□ -1.32
NEDD9-212ENST00000508800 SUN5Q8TC36 379 aa6.78□□□□□ -1.32
NEDD9-212ENST00000508800 GAGE12HA6NDE8 117 aa6.77□□□□□ -1.33
NEDD9-212ENST00000508800 TMBIM6P55061 237 aa6.77□□□□□ -1.33
NEDD9-212ENST00000508800 C1orf137Q5JT78 98 aa6.77□□□□□ -1.33
NEDD9-212ENST00000508800 GFRA4Q9GZZ7 299 aa6.77□□□□□ -1.33
NEDD9-212ENST00000508800 EPDR1Q9UM22 224 aa6.77□□□□□ -1.33
NEDD9-212ENST00000508800 IGLV4-60A0A075B6I1 120 aa6.76□□□□□ -1.33
NEDD9-212ENST00000508800 H3BMQ9 156 aa6.76□□□□□ -1.33
NEDD9-212ENST00000508800 TRIQKQ629K1 86 aa6.76□□□□□ -1.33
NEDD9-212ENST00000508800 CARD19Q96LW7 228 aa6.76□□□□□ -1.33
NEDD9-212ENST00000508800 TMEM243Q9BU79 118 aa6.76□□□□□ -1.33
NEDD9-212ENST00000508800 ARL2-SNX15V9GYD0 113 aa6.76□□□□□ -1.33
NEDD9-212ENST00000508800 GRIFINA4D1Z8 144 aa6.75□□□□□ -1.33
NEDD9-212ENST00000508800 M0R036 132 aa6.75□□□□□ -1.33
NEDD9-212ENST00000508800 IGLV7-43P04211 117 aa6.75□□□□□ -1.33
NEDD9-212ENST00000508800 ARL14EPLP0DKL9 152 aa6.75□□□□□ -1.33
NEDD9-212ENST00000508800 S100A5P33763 92 aa6.75□□□□□ -1.33
NEDD9-212ENST00000508800 PTTG1IPP53801 180 aa6.75□□□□□ -1.33
NEDD9-212ENST00000508800 FAM162BQ5T6X4 162 aa6.75□□□□□ -1.33
NEDD9-212ENST00000508800 MED28Q9H204 178 aa6.75□□□□□ -1.33
NEDD9-212ENST00000508800 F5H697 171 aa6.74□□□□□ -1.33
NEDD9-212ENST00000508800 BTCP35070 178 aa6.74□□□□□ -1.33
NEDD9-212ENST00000508800 AMTP48728 403 aa6.74□□□□□ -1.33
NEDD9-212ENST00000508800 SUMO1P63165 101 aaKnown RBP6.74□□□□□ -1.33
NEDD9-212ENST00000508800 ZNF674Q2M3X9 581 aa6.74□□□□□ -1.33
NEDD9-212ENST00000508800 SCGB1C1Q8TD33 95 aa6.74□□□□□ -1.33
NEDD9-212ENST00000508800 LOC107984640A0A0U1RRK4 108 aa6.73□□□□□ -1.33
NEDD9-212ENST00000508800 UBE2L6O14933 153 aa6.73□□□□□ -1.33
NEDD9-212ENST00000508800 NOL3O60936 208 aaKnown RBP6.73□□□□□ -1.33
NEDD9-212ENST00000508800 EIF3GO75821 320 aaKnown RBP eCLIP6.73□□□□□ -1.33
NEDD9-212ENST00000508800 KRTAP1-4P0C5Y4 121 aa6.73□□□□□ -1.33
NEDD9-212ENST00000508800 LINC01547P58512 204 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-212ENST00000508800 COX8CQ7Z4L0 72 aa6.73□□□□□ -1.33
NEDD9-212ENST00000508800 TSKUQ8WUA8 353 aa6.73□□□□□ -1.33
NEDD9-212ENST00000508800 CHCHD10Q8WYQ3 142 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-212ENST00000508800 ZNF471Q9BX82 626 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-212ENST00000508800 CARHSP1Q9Y2V2 147 aaKnown RBP6.73□□□□□ -1.33
NEDD9-212ENST00000508800 MUC17Q685J3 4493 aa6.72□□□□□ -1.33
NEDD9-212ENST00000508800 A6NHS1 94 aa6.72□□□□□ -1.33
NEDD9-212ENST00000508800 SH2D1AO60880 128 aa6.72□□□□□ -1.33
NEDD9-212ENST00000508800 EIF5AP63241 154 aaKnown RBP6.72□□□□□ -1.33
NEDD9-212ENST00000508800 Q86TA4 180 aa6.72□□□□□ -1.33
NEDD9-212ENST00000508800 PGLYRP4Q96LB8 373 aa6.72□□□□□ -1.33
NEDD9-212ENST00000508800 MLST8Q9BVC4 326 aa6.72□□□□□ -1.33
NEDD9-212ENST00000508800 TMEM167BQ9NRX6 74 aa6.72□□□□□ -1.33
NEDD9-212ENST00000508800 ZFP30Q9Y2G7 519 aa6.72□□□□□ -1.33
NEDD9-212ENST00000508800 TRAV34A0A0B4J273 112 aa6.71□□□□□ -1.34
NEDD9-212ENST00000508800 STAG3L2P0CL84 134 aa6.71□□□□□ -1.34
NEDD9-212ENST00000508800 STAG3L3P0CL85 134 aa6.71□□□□□ -1.34
NEDD9-212ENST00000508800 SMIM17P0DL12 118 aa6.71□□□□□ -1.34
NEDD9-212ENST00000508800 FGF6P10767 208 aa6.71□□□□□ -1.34
NEDD9-212ENST00000508800 CDC34P49427 236 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-212ENST00000508800 SYCNQ0VAF6 134 aa6.71□□□□□ -1.34
NEDD9-212ENST00000508800 LCE2CQ5TA81 110 aa6.71□□□□□ -1.34
NEDD9-212ENST00000508800 IGHV1-58A0A0C4DH39 117 aa6.7□□□□□ -1.34
NEDD9-212ENST00000508800 GCHFRP30047 84 aa6.7□□□□□ -1.34
NEDD9-212ENST00000508800 CRIP1P50238 77 aa6.7□□□□□ -1.34
NEDD9-212ENST00000508800 CYCSP99999 105 aaKnown RBP6.7□□□□□ -1.34
NEDD9-212ENST00000508800 GAGE2BQ13066 116 aa6.7□□□□□ -1.34
NEDD9-212ENST00000508800 OR10AG1Q8NH19 301 aa6.7□□□□□ -1.34
NEDD9-212ENST00000508800 ISOC2Q96AB3 205 aa6.7□□□□□ -1.34
NEDD9-212ENST00000508800 CDIP1Q9H305 208 aa6.7□□□□□ -1.34
NEDD9-212ENST00000508800 TMSB15BA0A087X1C1 80 aa6.69□□□□□ -1.34
NEDD9-212ENST00000508800 A0A1W2PNN7 141 aa6.69□□□□□ -1.34
NEDD9-212ENST00000508800 A0A1W2PRE2 83 aa6.69□□□□□ -1.34
NEDD9-212ENST00000508800 HMGB3O15347 200 aaKnown RBP6.69□□□□□ -1.34
NEDD9-212ENST00000508800 CXCL1P09341 107 aa6.69□□□□□ -1.34
NEDD9-212ENST00000508800 TPRXLQ17RH7 258 aa6.69□□□□□ -1.34
NEDD9-212ENST00000508800 C9orf116Q5BN46 136 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-212ENST00000508800 AP1S3Q96PC3 154 aa6.69□□□□□ -1.34
NEDD9-212ENST00000508800 SEC22CQ9BRL7 303 aa6.69□□□□□ -1.34
NEDD9-212ENST00000508800 IGKV3OR2-268A0A0C4DH90 116 aa6.68□□□□□ -1.34
NEDD9-212ENST00000508800 ZNF561-AS1K7EIQ3 104 aa6.68□□□□□ -1.34
NEDD9-212ENST00000508800 SRSF3P84103 164 aaKnown RBP6.68□□□□□ -1.34
NEDD9-212ENST00000508800 SPANXN1Q5VSR9 72 aa6.68□□□□□ -1.34
NEDD9-212ENST00000508800 HIST1H2BAQ96A08 127 aa6.68□□□□□ -1.34
NEDD9-212ENST00000508800 HSPB11Q9Y547 144 aa6.68□□□□□ -1.34
NEDD9-212ENST00000508800 PEX7O00628 323 aa6.67□□□□□ -1.34
NEDD9-212ENST00000508800 TSPAN13O95857 204 aa6.67□□□□□ -1.34
NEDD9-212ENST00000508800 CXorf1O96002 111 aa6.67□□□□□ -1.34
NEDD9-212ENST00000508800 OR5AL1P0C617 328 aa6.67□□□□□ -1.34
NEDD9-212ENST00000508800 RPL12P30050 165 aaKnown RBP6.67□□□□□ -1.34
NEDD9-212ENST00000508800 FOXI1Q12951 378 aa6.67□□□□□ -1.34
NEDD9-212ENST00000508800 RAB24Q969Q5 203 aa6.67□□□□□ -1.34
NEDD9-212ENST00000508800 SDHCQ99643 169 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-212ENST00000508800 NKX6-2Q9C056 277 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-212ENST00000508800 NUDT15Q9NV35 164 aa6.67□□□□□ -1.34
NEDD9-212ENST00000508800 A0A087WZ39 114 aa6.66□□□□□ -1.34
NEDD9-212ENST00000508800 M0QY20 66 aa6.66□□□□□ -1.34
NEDD9-212ENST00000508800 SNAI2O43623 268 aa6.66□□□□□ -1.34
NEDD9-212ENST00000508800 CAMPP49913 170 aa6.66□□□□□ -1.34
NEDD9-212ENST00000508800 COTL1Q14019 142 aa6.66□□□□□ -1.34
NEDD9-212ENST00000508800 PHF5AQ7RTV0 110 aaKnown RBP6.66□□□□□ -1.34
NEDD9-212ENST00000508800 FMC1Q96HJ9 113 aa6.66□□□□□ -1.34
NEDD9-212ENST00000508800 SSBP4Q9BWG4 385 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms