RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 GAGE5Q13069 117 aa7.76□□□□□ -1.17
BRCC3P1-201ENST00000508559 KIAA1644Q3SXP7 199 aa7.76□□□□□ -1.17
BRCC3P1-201ENST00000508559 GAGE13Q4V321 117 aa7.76□□□□□ -1.17
BRCC3P1-201ENST00000508559 PRELID3AQ96N28 172 aa7.76□□□□□ -1.17
BRCC3P1-201ENST00000508559 WWC2-AS2Q96NR7 200 aa7.76□□□□□ -1.17
BRCC3P1-201ENST00000508559 NIT2Q9NQR4 276 aa7.76□□□□□ -1.17
BRCC3P1-201ENST00000508559 KLK5Q9Y337 293 aaPredicted RBP7.76□□□□□ -1.17
BRCC3P1-201ENST00000508559 ICOSQ9Y6W8 199 aa7.76□□□□□ -1.17
BRCC3P1-201ENST00000508559 COL7A1Q02388 2944 aa7.75□□□□□ -1.17
BRCC3P1-201ENST00000508559 TRBV10-1A0A0K0K1A3 114 aa7.75□□□□□ -1.17
BRCC3P1-201ENST00000508559 NUPR2A6NF83 97 aa7.75□□□□□ -1.17
BRCC3P1-201ENST00000508559 M0QY20 66 aa7.75□□□□□ -1.17
BRCC3P1-201ENST00000508559 P0DMU3 169 aa7.75□□□□□ -1.17
BRCC3P1-201ENST00000508559 FAM231AP0DMU4 169 aa7.75□□□□□ -1.17
BRCC3P1-201ENST00000508559 FAM231CP0DMU5 169 aa7.75□□□□□ -1.17
BRCC3P1-201ENST00000508559 ZNRF2Q8NHG8 242 aa7.75□□□□□ -1.17
BRCC3P1-201ENST00000508559 DNAJC30Q96LL9 226 aa7.75□□□□□ -1.17
BRCC3P1-201ENST00000508559 ST20Q9HBF5 79 aa7.75□□□□□ -1.17
BRCC3P1-201ENST00000508559 SRIP30626 198 aa7.74□□□□□ -1.17
BRCC3P1-201ENST00000508559 MRPL23Q16540 153 aaKnown RBP7.74□□□□□ -1.17
BRCC3P1-201ENST00000508559 ZFAND6Q6FIF0 208 aa7.74□□□□□ -1.17
BRCC3P1-201ENST00000508559 CEMP1Q6PRD7 247 aaPredicted RBP7.74□□□□□ -1.17
BRCC3P1-201ENST00000508559 RPL39LQ96EH5 51 aaKnown RBP7.74□□□□□ -1.17
BRCC3P1-201ENST00000508559 NACAE9PAV3 2078 aa7.74□□□□□ -1.17
BRCC3P1-201ENST00000508559 TRBV7-3A0A075B6L6 115 aa7.73□□□□□ -1.17
BRCC3P1-201ENST00000508559 LOC100131303A0A0U1RQF7 123 aa7.73□□□□□ -1.17
BRCC3P1-201ENST00000508559 TNFRSF6BO95407 300 aa7.73□□□□□ -1.17
BRCC3P1-201ENST00000508559 TRGC2P03986 189 aa7.73□□□□□ -1.17
BRCC3P1-201ENST00000508559 SH2D6Q7Z4S9 175 aa7.73□□□□□ -1.17
BRCC3P1-201ENST00000508559 C15orf53Q8NAA6 179 aa7.73□□□□□ -1.17
BRCC3P1-201ENST00000508559 NEXN-AS1Q8NBZ9 246 aa7.73□□□□□ -1.17
BRCC3P1-201ENST00000508559 MUC7Q8TAX7 377 aa7.73□□□□□ -1.17
BRCC3P1-201ENST00000508559 VSIG2Q96IQ7 327 aa7.73□□□□□ -1.17
BRCC3P1-201ENST00000508559 MAP1LC3AQ9H492 121 aa7.73□□□□□ -1.17
BRCC3P1-201ENST00000508559 LAMTOR2Q9Y2Q5 125 aa7.73□□□□□ -1.17
BRCC3P1-201ENST00000508559 TGP01266 2768 aa7.72□□□□□ -1.17
BRCC3P1-201ENST00000508559 A0A096LPF7 62 aa7.72□□□□□ -1.17
BRCC3P1-201ENST00000508559 LOC389332A0A1B0GUA5 103 aa7.72□□□□□ -1.17
BRCC3P1-201ENST00000508559 H3BNG1 76 aa7.72□□□□□ -1.17
BRCC3P1-201ENST00000508559 PMCHP20382 165 aa7.72□□□□□ -1.17
BRCC3P1-201ENST00000508559 SDHAF1A6NFY7 115 aa7.71□□□□□ -1.18
BRCC3P1-201ENST00000508559 C1orf196B1AJZ1 125 aa7.71□□□□□ -1.18
BRCC3P1-201ENST00000508559 PHOX2AO14813 284 aa7.71□□□□□ -1.18
BRCC3P1-201ENST00000508559 GAS8-AS1O95177 125 aa7.71□□□□□ -1.18
BRCC3P1-201ENST00000508559 NPYP01303 97 aa7.71□□□□□ -1.18
BRCC3P1-201ENST00000508559 SUMO2P61956 95 aaKnown RBP7.71□□□□□ -1.18
BRCC3P1-201ENST00000508559 NEGR1Q7Z3B1 354 aa7.71□□□□□ -1.18
BRCC3P1-201ENST00000508559 NRACQ8N912 160 aa7.71□□□□□ -1.18
BRCC3P1-201ENST00000508559 ATP6V0E2Q8NHE4 81 aa7.71□□□□□ -1.18
BRCC3P1-201ENST00000508559 C20orf78Q9BR46 151 aa7.71□□□□□ -1.18
BRCC3P1-201ENST00000508559 ALKBH7Q9BT30 221 aaPredicted RBP7.71□□□□□ -1.18
BRCC3P1-201ENST00000508559 IGHV3-38A0A0C4DH36 116 aa7.7□□□□□ -1.18
BRCC3P1-201ENST00000508559 TRBV6-5A0A0K0K1A5 114 aa7.7□□□□□ -1.18
BRCC3P1-201ENST00000508559 VCYO14598 125 aa7.7□□□□□ -1.18
BRCC3P1-201ENST00000508559 FCER1GP30273 86 aa7.7□□□□□ -1.18
BRCC3P1-201ENST00000508559 DAZ4Q86SG3 579 aaKnown RBP7.7□□□□□ -1.18
BRCC3P1-201ENST00000508559 PRSS3P2Q8NHM4 247 aa7.7□□□□□ -1.18
BRCC3P1-201ENST00000508559 KIR2DL4Q99706 377 aa7.7□□□□□ -1.18
BRCC3P1-201ENST00000508559 DAZ3Q9NR90 486 aaKnown RBP7.7□□□□□ -1.18
BRCC3P1-201ENST00000508559 Q9UF83 564 aa7.7□□□□□ -1.18
BRCC3P1-201ENST00000508559 I3L3M4 83 aa7.69□□□□□ -1.18
BRCC3P1-201ENST00000508559 UBE2D3P61077 147 aa7.69□□□□□ -1.18
BRCC3P1-201ENST00000508559 UBE2D2P62837 147 aa7.69□□□□□ -1.18
BRCC3P1-201ENST00000508559 COTL1Q14019 142 aa7.69□□□□□ -1.18
BRCC3P1-201ENST00000508559 FA2HQ7L5A8 372 aa7.69□□□□□ -1.18
BRCC3P1-201ENST00000508559 TMEM70Q9BUB7 260 aa7.69□□□□□ -1.18
BRCC3P1-201ENST00000508559 TCAPO15273 167 aa7.68□□□□□ -1.18
BRCC3P1-201ENST00000508559 TMEM97Q5BJF2 176 aa7.68□□□□□ -1.18
BRCC3P1-201ENST00000508559 BAGE3Q86Y29 109 aa7.68□□□□□ -1.18
BRCC3P1-201ENST00000508559 DEFB104AQ8WTQ1 72 aa7.68□□□□□ -1.18
BRCC3P1-201ENST00000508559 SMIM2Q9BVW6 85 aa7.68□□□□□ -1.18
BRCC3P1-201ENST00000508559 GTSF1LQ9H1H1 148 aa7.68□□□□□ -1.18
BRCC3P1-201ENST00000508559 NXT2Q9NPJ8 142 aaKnown RBP7.68□□□□□ -1.18
BRCC3P1-201ENST00000508559 C3orf84H3BNL1 204 aa7.67□□□□□ -1.18
BRCC3P1-201ENST00000508559 CCL18P55774 89 aa7.67□□□□□ -1.18
BRCC3P1-201ENST00000508559 TCTAP57738 103 aa7.67□□□□□ -1.18
BRCC3P1-201ENST00000508559 RAB5BP61020 215 aa7.67□□□□□ -1.18
BRCC3P1-201ENST00000508559 IQCJQ1A5X6 159 aa7.67□□□□□ -1.18
BRCC3P1-201ENST00000508559 UBE2DNLQ8IWF7 75 aa7.67□□□□□ -1.18
BRCC3P1-201ENST00000508559 IFI27P40305 119 aaPredicted RBP7.66□□□□□ -1.18
BRCC3P1-201ENST00000508559 AMTP48728 403 aa7.66□□□□□ -1.18
BRCC3P1-201ENST00000508559 POLR2KP53803 58 aaKnown RBP7.66□□□□□ -1.18
BRCC3P1-201ENST00000508559 RPL32P62910 135 aaKnown RBP7.66□□□□□ -1.18
BRCC3P1-201ENST00000508559 RNASEKQ6P5S7 137 aaKnown RBP7.66□□□□□ -1.18
BRCC3P1-201ENST00000508559 Q8N8P6 123 aa7.66□□□□□ -1.18
BRCC3P1-201ENST00000508559 C18orf32Q8TCD1 76 aa7.66□□□□□ -1.18
BRCC3P1-201ENST00000508559 TRBV25-1A0A075B6N4 114 aa7.65□□□□□ -1.18
BRCC3P1-201ENST00000508559 TRAV8-6A0A0B4J262 113 aa7.65□□□□□ -1.18
BRCC3P1-201ENST00000508559 IGHV1-24A0A0C4DH33 117 aa7.65□□□□□ -1.18
BRCC3P1-201ENST00000508559 TRBV27A0A0K0K1C4 114 aa7.65□□□□□ -1.18
BRCC3P1-201ENST00000508559 UBE2L6O14933 153 aa7.65□□□□□ -1.18
BRCC3P1-201ENST00000508559 LINC00694P0DN24 101 aa7.65□□□□□ -1.18
BRCC3P1-201ENST00000508559 CHCHD5Q9BSY4 110 aa7.65□□□□□ -1.18
BRCC3P1-201ENST00000508559 APLNQ9ULZ1 77 aa7.65□□□□□ -1.18
BRCC3P1-201ENST00000508559 ORMDL2Q53FV1 153 aa7.64□□□□□ -1.19
BRCC3P1-201ENST00000508559 LYPD5Q6UWN5 251 aa7.64□□□□□ -1.19
BRCC3P1-201ENST00000508559 NIT1Q86X76 327 aa7.64□□□□□ -1.19
BRCC3P1-201ENST00000508559 TMEM243Q9BU79 118 aa7.64□□□□□ -1.19
BRCC3P1-201ENST00000508559 TRBV6-8A0A0A6YYG3 113 aa7.63□□□□□ -1.19
BRCC3P1-201ENST00000508559 PRSS47A8MTI9 375 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms