RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 H3BNG1 76 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 K7EQD1 137 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 RS1O15537 224 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 SH2D1AO60880 128 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 NXPH4O95158 308 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 RNASE3P12724 160 aaKnown RBP3.08□□□□□ -1.92
NUP54-206ENST00000508465 S100A4P26447 101 aaKnown RBP3.08□□□□□ -1.92
NUP54-206ENST00000508465 FUSP35637 526 aaKnown RBP eCLIP3.08□□□□□ -1.92
NUP54-206ENST00000508465 HERV-K104P63124 156 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 SLAQ13239 276 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 ZNF345Q14585 488 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 MRPL23Q16540 153 aaKnown RBP3.08□□□□□ -1.92
NUP54-206ENST00000508465 ZFP69Q49AA0 526 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 ZNF506Q5JVG8 444 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 CFAP126Q5VTH2 177 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 LINC00336Q6ZUF6 198 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 Q86TA4 180 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 SLC25A29Q8N8R3 303 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 HIST1H2BAQ96A08 127 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 C18orf15Q96N68 181 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 SAMD10Q9BYL1 202 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 NKX6-2Q9C056 277 aaPredicted RBP3.08□□□□□ -1.92
NUP54-206ENST00000508465 GNG13Q9P2W3 67 aa3.08□□□□□ -1.92
NUP54-206ENST00000508465 MRPS16Q9Y3D3 137 aaKnown RBP3.08□□□□□ -1.92
NUP54-206ENST00000508465 DNAH11Q96DT5 4516 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 FBLL1A6NHQ2 334 aaKnown RBP3.07□□□□□ -1.92
NUP54-206ENST00000508465 H3BVH4 76 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 SIVA1O15304 175 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 LTAP01374 205 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 C1QBP02746 253 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 ARMS2P0C7Q2 107 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 TPT1P13693 172 aaKnown RBP3.07□□□□□ -1.92
NUP54-206ENST00000508465 GATA1P15976 413 aaPredicted RBP3.07□□□□□ -1.92
NUP54-206ENST00000508465 AKR1C3P42330 323 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 NKX2-5P52952 324 aaPredicted RBP3.07□□□□□ -1.92
NUP54-206ENST00000508465 UBE2G1P62253 170 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 EIF5AP63241 154 aaKnown RBP3.07□□□□□ -1.92
NUP54-206ENST00000508465 RPL19P84098 196 aaKnown RBP3.07□□□□□ -1.92
NUP54-206ENST00000508465 SOHLH1Q5JUK2 328 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 FAM162BQ5T6X4 162 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 NEGR1Q7Z3B1 354 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 BAGE2Q86Y30 109 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 TCTE3Q8IZS6 198 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 C6orf223Q8N319 242 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 C14orf178Q8N769 122 aaPredicted RBP3.07□□□□□ -1.92
NUP54-206ENST00000508465 FMC1Q96HJ9 113 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 C9orf85Q96MD7 179 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 DERL1Q9BUN8 251 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 ZFP30Q9Y2G7 519 aa3.07□□□□□ -1.92
NUP54-206ENST00000508465 M0R381 172 aa3.06□□□□□ -1.92
NUP54-206ENST00000508465 GZMBP10144 247 aa3.06□□□□□ -1.92
NUP54-206ENST00000508465 SRIP30626 198 aa3.06□□□□□ -1.92
NUP54-206ENST00000508465 ASIPP42127 132 aa3.06□□□□□ -1.92
NUP54-206ENST00000508465 RPL35P42766 123 aaKnown RBP3.06□□□□□ -1.92
NUP54-206ENST00000508465 SULT1A2P50226 295 aa3.06□□□□□ -1.92
NUP54-206ENST00000508465 GAGE5Q13069 117 aa3.06□□□□□ -1.92
NUP54-206ENST00000508465 AKAP14Q86UN6 197 aa3.06□□□□□ -1.92
NUP54-206ENST00000508465 WFDC10BQ8IUB3 73 aa3.06□□□□□ -1.92
NUP54-206ENST00000508465 C9orf62Q8N4C0 152 aa3.06□□□□□ -1.92
NUP54-206ENST00000508465 PCNPQ8WW12 178 aaKnown RBP3.06□□□□□ -1.92
NUP54-206ENST00000508465 TRAV1-1A0A0B4J248 108 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 TRBV6-1A0A0K0K1D8 114 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 RBFOX3A6NFN3 312 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 IGHV3-30P01768 117 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 IGHV3-33P01772 117 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 S100A9P06702 114 aaKnown RBP3.05□□□□□ -1.92
NUP54-206ENST00000508465 IGHV3-30-3P0DP02 117 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 IGHV3-30-5P0DP03 117 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 MGST1P10620 155 aaKnown RBP3.05□□□□□ -1.92
NUP54-206ENST00000508465 RAB5CP51148 216 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 LINC00315P59091 139 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 CENPWQ5EE01 88 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 FAM74A4Q5TZK3 123 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 EIF5AL1Q6IS14 154 aaKnown RBP3.05□□□□□ -1.92
NUP54-206ENST00000508465 UFSP1Q6NVU6 142 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 ALKAL2Q6UX46 152 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 COX8CQ7Z4L0 72 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 SLC51BQ86UW2 128 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 ATP6V0E2Q8NHE4 81 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 PTH2Q96A98 100 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 TXNDC17Q9BRA2 123 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 PRADC1Q9BSG0 188 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 UPK3BQ9BT76 320 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 PARLQ9H300 379 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 MED9Q9NWA0 146 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 IL36BQ9NZH7 164 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 PHLDA3Q9Y5J5 127 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 KIAA1109Q2LD37 5005 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 HERC2O95714 4834 aa3.05□□□□□ -1.92
NUP54-206ENST00000508465 DYNC1H1Q14204 4646 aaKnown RBP3.05□□□□□ -1.92
NUP54-206ENST00000508465 TRAV9-2A0A087WT02 112 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 TRBV6-4A0A1B0GX49 114 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 A8MWV9 139 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 C16orf90A8MZG2 172 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 TEX46H3BTG2 121 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 IGLV2-8P01709 118 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 CRYGDP07320 174 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 TTC32Q5I0X7 151 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 OR10J3Q5JRS4 329 aa3.04□□□□□ -1.92
NUP54-206ENST00000508465 DNLZQ5SXM8 178 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms