RNA–Protein interactions for RNA: ENST00000507436.1

AP3S1-205, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-205ENST00000507436 HSD17B12Q53GQ0 312 aa-1.25□□□□□ -2.61
AP3S1-205ENST00000507436 C3orf33Q6P1S2 294 aa-1.25□□□□□ -2.61
AP3S1-205ENST00000507436 HRCT1Q6UXD1 115 aa-1.25□□□□□ -2.61
AP3S1-205ENST00000507436 METTL1Q9UBP6 276 aaKnown RBP-1.25□□□□□ -2.61
AP3S1-205ENST00000507436 MED31Q9Y3C7 131 aa-1.25□□□□□ -2.61
AP3S1-205ENST00000507436 NIPBLQ6KC79 2804 aaeCLIP-1.25□□□□□ -2.61
AP3S1-205ENST00000507436 DNHD1Q96M86 4753 aa-1.25□□□□□ -2.61
AP3S1-205ENST00000507436 FER1L6Q2WGJ9 1857 aa-1.26□□□□□ -2.61
AP3S1-205ENST00000507436 SLC25A5P05141 298 aaKnown RBP-1.26□□□□□ -2.61
AP3S1-205ENST00000507436 HIST1H1BP16401 226 aaKnown RBP-1.26□□□□□ -2.61
AP3S1-205ENST00000507436 SERPINB1P30740 379 aa-1.26□□□□□ -2.61
AP3S1-205ENST00000507436 NPC2P61916 151 aa-1.26□□□□□ -2.61
AP3S1-205ENST00000507436 SLC35B3Q9H1N7 401 aa-1.26□□□□□ -2.61
AP3S1-205ENST00000507436 KIF13AQ9H1H9 1805 aa-1.26□□□□□ -2.61
AP3S1-205ENST00000507436 SPTBN4Q9H254 2564 aa-1.27□□□□□ -2.61
AP3S1-205ENST00000507436 FXYD6-FXYD2A0A087WZ82 144 aa-1.27□□□□□ -2.61
AP3S1-205ENST00000507436 STX12Q86Y82 276 aa-1.27□□□□□ -2.61
AP3S1-205ENST00000507436 DYNLRB2Q8TF09 96 aa-1.27□□□□□ -2.61
AP3S1-205ENST00000507436 STOML2Q9UJZ1 356 aa-1.27□□□□□ -2.61
AP3S1-205ENST00000507436 C10orf71Q711Q0 1435 aa-1.27□□□□□ -2.61
AP3S1-205ENST00000507436 PHIPQ8WWQ0 1821 aa-1.27□□□□□ -2.61
AP3S1-205ENST00000507436 SPG11Q96JI7 2443 aa-1.28□□□□□ -2.61
AP3S1-205ENST00000507436 IQSEC2Q5JU85 1478 aa-1.28□□□□□ -2.61
AP3S1-205ENST00000507436 APOC4-APOC2K7ER74 178 aa-1.28□□□□□ -2.61
AP3S1-205ENST00000507436 M0R2P5 195 aa-1.28□□□□□ -2.61
AP3S1-205ENST00000507436 PSPHP78330 225 aa-1.28□□□□□ -2.61
AP3S1-205ENST00000507436 SPRR2FQ96RM1 72 aa-1.28□□□□□ -2.61
AP3S1-205ENST00000507436 TRAPPC2LQ9UL33 140 aa-1.28□□□□□ -2.61
AP3S1-205ENST00000507436 TEP1Q99973 2627 aaKnown RBP-1.29□□□□□ -2.62
AP3S1-205ENST00000507436 PTPRMP28827 1452 aa-1.29□□□□□ -2.62
AP3S1-205ENST00000507436 EIF3AQ14152 1382 aaKnown RBP-1.29□□□□□ -2.62
AP3S1-205ENST00000507436 SPCS2Q15005 226 aa-1.29□□□□□ -2.62
AP3S1-205ENST00000507436 FXYD6Q9H0Q3 95 aa-1.29□□□□□ -2.62
AP3S1-205ENST00000507436 CASZ1Q86V15 1759 aa-1.29□□□□□ -2.62
AP3S1-205ENST00000507436 NRXN2Q9P2S2 1712 aa-1.29□□□□□ -2.62
AP3S1-205ENST00000507436 SYNMO15061 1565 aa-1.3□□□□□ -2.62
AP3S1-205ENST00000507436 MED23Q9ULK4 1368 aa-1.3□□□□□ -2.62
AP3S1-205ENST00000507436 TRAV1-2A0A0B4J238 106 aa-1.3□□□□□ -2.62
AP3S1-205ENST00000507436 TRAV12-3A0A0B4J271 114 aa-1.3□□□□□ -2.62
AP3S1-205ENST00000507436 CCDC179H3BU77 68 aa-1.3□□□□□ -2.62
AP3S1-205ENST00000507436 NPFFO15130 113 aa-1.3□□□□□ -2.62
AP3S1-205ENST00000507436 TCRAP04437 139 aa-1.3□□□□□ -2.62
AP3S1-205ENST00000507436 HAMPP81172 84 aa-1.3□□□□□ -2.62
AP3S1-205ENST00000507436 SNX29P2Q8IUI4 249 aa-1.3□□□□□ -2.62
AP3S1-205ENST00000507436 THEM6Q8WUY1 208 aa-1.3□□□□□ -2.62
AP3S1-205ENST00000507436 CHMP6Q96FZ7 201 aa-1.3□□□□□ -2.62
AP3S1-205ENST00000507436 NOP16Q9Y3C1 178 aaKnown RBP-1.3□□□□□ -2.62
AP3S1-205ENST00000507436 LYSTQ99698 3801 aa-1.3□□□□□ -2.62
AP3S1-205ENST00000507436 E7EQ34 232 aa-1.31□□□□□ -2.62
AP3S1-205ENST00000507436 SPINK4O60575 86 aa-1.31□□□□□ -2.62
AP3S1-205ENST00000507436 POLR2HP52434 150 aaKnown RBP-1.31□□□□□ -2.62
AP3S1-205ENST00000507436 EDDM3BP56851 147 aa-1.31□□□□□ -2.62
AP3S1-205ENST00000507436 DCDP81605 110 aaKnown RBP-1.31□□□□□ -2.62
AP3S1-205ENST00000507436 TMEM78Q5T7P6 136 aa-1.31□□□□□ -2.62
AP3S1-205ENST00000507436 ATP6V0E2Q8NHE4 81 aa-1.31□□□□□ -2.62
AP3S1-205ENST00000507436 BOLA2Q9H3K6 86 aa-1.31□□□□□ -2.62
AP3S1-205ENST00000507436 DSPP15924 2871 aaKnown RBP-1.31□□□□□ -2.62
AP3S1-205ENST00000507436 UHRF1BP1LA0JNW5 1464 aa-1.31□□□□□ -2.62
AP3S1-205ENST00000507436 ZNF609O15014 1411 aa-1.32□□□□□ -2.62
AP3S1-205ENST00000507436 USP9XQ93008 2570 aaPredicted RBP-1.32□□□□□ -2.62
AP3S1-205ENST00000507436 DNAJC13O75165 2243 aa-1.32□□□□□ -2.62
AP3S1-205ENST00000507436 KDM5CP41229 1560 aa-1.32□□□□□ -2.62
AP3S1-205ENST00000507436 BICRAQ9NZM4 1560 aa-1.32□□□□□ -2.62
AP3S1-205ENST00000507436 BORCS7-ASMTA0A0B4J1R7 106 aa-1.32□□□□□ -2.62
AP3S1-205ENST00000507436 SPRR1BP22528 89 aa-1.32□□□□□ -2.62
AP3S1-205ENST00000507436 DEFB135Q30KP9 77 aa-1.32□□□□□ -2.62
AP3S1-205ENST00000507436 WFDC6Q9BQY6 131 aa-1.32□□□□□ -2.62
AP3S1-205ENST00000507436 DNAH7Q8WXX0 4024 aa-1.32□□□□□ -2.62
AP3S1-205ENST00000507436 CMYA5Q8N3K9 4069 aa-1.32□□□□□ -2.62
AP3S1-205ENST00000507436 DNAH11Q96DT5 4516 aa-1.32□□□□□ -2.62
AP3S1-205ENST00000507436 A0A1W2PRE2 83 aa-1.33□□□□□ -2.62
AP3S1-205ENST00000507436 S100A3P33764 101 aa-1.33□□□□□ -2.62
AP3S1-205ENST00000507436 Q5VV11 94 aa-1.33□□□□□ -2.62
AP3S1-205ENST00000507436 CCDC115Q96NT0 180 aa-1.33□□□□□ -2.62
AP3S1-205ENST00000507436 SCN3BQ9NY72 215 aa-1.33□□□□□ -2.62
AP3S1-205ENST00000507436 AKAP13Q12802 2813 aa-1.33□□□□□ -2.62
AP3S1-205ENST00000507436 PARP14Q460N5 1801 aa-1.33□□□□□ -2.62
AP3S1-205ENST00000507436 LAMA3Q16787 3333 aa-1.33□□□□□ -2.62
AP3S1-205ENST00000507436 DNAH1Q9P2D7 4330 aa-1.34□□□□□ -2.62
AP3S1-205ENST00000507436 SIPA1L3O60292 1781 aaPredicted RBP-1.34□□□□□ -2.62
AP3S1-205ENST00000507436 APOBP04114 4563 aaKnown RBP-1.34□□□□□ -2.62
AP3S1-205ENST00000507436 ZMYM4Q5VZL5 1548 aa-1.34□□□□□ -2.62
AP3S1-205ENST00000507436 RBP4P02753 201 aa-1.34□□□□□ -2.62
AP3S1-205ENST00000507436 SMIM6P0DI80 62 aa-1.34□□□□□ -2.62
AP3S1-205ENST00000507436 HOPXQ9BPY8 73 aaPredicted RBP-1.34□□□□□ -2.62
AP3S1-205ENST00000507436 J3QLW9 94 aa-1.35□□□□□ -2.63
AP3S1-205ENST00000507436 YPEL1O60688 119 aa-1.35□□□□□ -2.63
AP3S1-205ENST00000507436 BCE1O60756 84 aa-1.35□□□□□ -2.63
AP3S1-205ENST00000507436 RPL7P18124 248 aaKnown RBP-1.35□□□□□ -2.63
AP3S1-205ENST00000507436 DEFB112Q30KQ8 113 aa-1.35□□□□□ -2.63
AP3S1-205ENST00000507436 TMEM91Q6ZNR0 172 aa-1.35□□□□□ -2.63
AP3S1-205ENST00000507436 TP53AIP1Q9HCN2 124 aa-1.35□□□□□ -2.63
AP3S1-205ENST00000507436 NPVFQ9HCQ7 196 aa-1.35□□□□□ -2.63
AP3S1-205ENST00000507436 IFT172Q9UG01 1749 aa-1.35□□□□□ -2.63
AP3S1-205ENST00000507436 ANKRD11Q6UB99 2663 aaPredicted RBP-1.35□□□□□ -2.63
AP3S1-205ENST00000507436 IBTKQ9P2D0 1353 aaPredicted RBP-1.35□□□□□ -2.63
AP3S1-205ENST00000507436 TSC2P49815 1807 aa-1.36□□□□□ -2.63
AP3S1-205ENST00000507436 ARFGEF1Q9Y6D6 1849 aa-1.36□□□□□ -2.63
AP3S1-205ENST00000507436 COX6B1P14854 86 aa-1.36□□□□□ -2.63
AP3S1-205ENST00000507436 CFAP126Q5VTH2 177 aa-1.36□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms