RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 NKX6-2Q9C056 277 aaPredicted RBP10.3□□□□□ -0.76
SNF8-205ENST00000507302 ACTR3CQ9C0K3 210 aaPredicted RBP10.3□□□□□ -0.76
SNF8-205ENST00000507302 DPH3P1Q9H4G8 78 aa10.3□□□□□ -0.76
SNF8-205ENST00000507302 FAM74A7A6NL05 159 aa10.29□□□□□ -0.76
SNF8-205ENST00000507302 CXCL1P09341 107 aa10.29□□□□□ -0.76
SNF8-205ENST00000507302 GZMBP10144 247 aa10.29□□□□□ -0.76
SNF8-205ENST00000507302 ZNF726P1Q15940 193 aa10.29□□□□□ -0.76
SNF8-205ENST00000507302 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.29□□□□□ -0.76
SNF8-205ENST00000507302 SSBP4Q9BWG4 385 aaPredicted RBP10.29□□□□□ -0.76
SNF8-205ENST00000507302 A0A1B0GUV1 79 aa10.28□□□□□ -0.76
SNF8-205ENST00000507302 LTAP01374 205 aa10.28□□□□□ -0.76
SNF8-205ENST00000507302 IFNA7P01567 189 aa10.28□□□□□ -0.76
SNF8-205ENST00000507302 GAGE6Q13070 117 aa10.28□□□□□ -0.76
SNF8-205ENST00000507302 ZNF56Q15929 161 aa10.28□□□□□ -0.76
SNF8-205ENST00000507302 C20orf203Q8NBC4 194 aa10.28□□□□□ -0.76
SNF8-205ENST00000507302 FMC1Q96HJ9 113 aa10.28□□□□□ -0.76
SNF8-205ENST00000507302 LPAP08519 4548 aa10.27□□□□□ -0.76
SNF8-205ENST00000507302 TRBV25-1A0A075B6N4 114 aa10.27□□□□□ -0.77
SNF8-205ENST00000507302 TMSB15BA0A087X1C1 80 aa10.27□□□□□ -0.77
SNF8-205ENST00000507302 SNAI2O43623 268 aa10.27□□□□□ -0.77
SNF8-205ENST00000507302 UPK1BO75841 260 aa10.27□□□□□ -0.77
SNF8-205ENST00000507302 IFITM3Q01628 133 aa10.27□□□□□ -0.77
SNF8-205ENST00000507302 OR10AG1Q8NH19 301 aa10.27□□□□□ -0.77
SNF8-205ENST00000507302 AQP10Q96PS8 301 aa10.27□□□□□ -0.77
SNF8-205ENST00000507302 DERL1Q9BUN8 251 aa10.27□□□□□ -0.77
SNF8-205ENST00000507302 AP5S1Q9NUS5 200 aa10.27□□□□□ -0.77
SNF8-205ENST00000507302 IGLV10-54A0A075B6I4 117 aa10.26□□□□□ -0.77
SNF8-205ENST00000507302 SRSF9Q13242 221 aaKnown RBP eCLIP10.26□□□□□ -0.77
SNF8-205ENST00000507302 SPINK6Q6UWN8 80 aa10.26□□□□□ -0.77
SNF8-205ENST00000507302 DPH3Q96FX2 82 aa10.26□□□□□ -0.77
SNF8-205ENST00000507302 SSNA1O43805 119 aa10.25□□□□□ -0.77
SNF8-205ENST00000507302 C15orf56Q8N910 161 aa10.25□□□□□ -0.77
SNF8-205ENST00000507302 S100ZQ8WXG8 99 aa10.25□□□□□ -0.77
SNF8-205ENST00000507302 GFRA4Q9GZZ7 299 aa10.25□□□□□ -0.77
SNF8-205ENST00000507302 CTXND1A0A1B0GTU2 59 aa10.24□□□□□ -0.77
SNF8-205ENST00000507302 OR5AL1P0C617 328 aa10.24□□□□□ -0.77
SNF8-205ENST00000507302 UBE2G2P60604 165 aa10.24□□□□□ -0.77
SNF8-205ENST00000507302 TCEAL7Q9BRU2 100 aa10.24□□□□□ -0.77
SNF8-205ENST00000507302 ZNF471Q9BX82 626 aaPredicted RBP10.24□□□□□ -0.77
SNF8-205ENST00000507302 NDUFA13Q9P0J0 144 aa10.24□□□□□ -0.77
SNF8-205ENST00000507302 IGLV4-60A0A075B6I1 120 aa10.23□□□□□ -0.77
SNF8-205ENST00000507302 IGHV1-24A0A0C4DH33 117 aa10.23□□□□□ -0.77
SNF8-205ENST00000507302 NDUFS6O75380 124 aaKnown RBP10.23□□□□□ -0.77
SNF8-205ENST00000507302 COX6A2Q02221 97 aa10.23□□□□□ -0.77
SNF8-205ENST00000507302 FHITP49789 147 aa10.22□□□□□ -0.77
SNF8-205ENST00000507302 UBE2G1P62253 170 aa10.22□□□□□ -0.77
SNF8-205ENST00000507302 REG3GQ6UW15 175 aa10.22□□□□□ -0.77
SNF8-205ENST00000507302 PRSS3P2Q8NHM4 247 aa10.22□□□□□ -0.77
SNF8-205ENST00000507302 MUC21A0A0G2JKD1 596 aa10.21□□□□□ -0.77
SNF8-205ENST00000507302 M0QY20 66 aa10.21□□□□□ -0.77
SNF8-205ENST00000507302 RPS10P46783 165 aaKnown RBP10.21□□□□□ -0.77
SNF8-205ENST00000507302 GTSF1Q8WW33 167 aa10.21□□□□□ -0.77
SNF8-205ENST00000507302 MLST8Q9BVC4 326 aa10.21□□□□□ -0.77
SNF8-205ENST00000507302 STPG4Q8N801 248 aa10.2□□□□□ -0.78
SNF8-205ENST00000507302 F5H697 171 aa10.19□□□□□ -0.78
SNF8-205ENST00000507302 MAJINQ3KP22 176 aa10.19□□□□□ -0.78
SNF8-205ENST00000507302 INO80EQ8NBZ0 244 aaPredicted RBP10.19□□□□□ -0.78
SNF8-205ENST00000507302 A6NHS1 94 aa10.18□□□□□ -0.78
SNF8-205ENST00000507302 PGLYRP4Q96LB8 373 aa10.18□□□□□ -0.78
SNF8-205ENST00000507302 SPANXN1Q5VSR9 72 aa10.17□□□□□ -0.78
SNF8-205ENST00000507302 RPL7L1Q6DKI1 246 aaKnown RBP10.17□□□□□ -0.78
SNF8-205ENST00000507302 CFAP161Q6P656 301 aa10.17□□□□□ -0.78
SNF8-205ENST00000507302 AP1S3Q96PC3 154 aa10.17□□□□□ -0.78
SNF8-205ENST00000507302 TMEM243Q9BU79 118 aa10.17□□□□□ -0.78
SNF8-205ENST00000507302 A0A096LNI7 61 aa10.16□□□□□ -0.78
SNF8-205ENST00000507302 GVQW2A0A096LPI5 108 aaPredicted RBP10.16□□□□□ -0.78
SNF8-205ENST00000507302 IGKV2-24A0A0C4DH68 120 aa10.16□□□□□ -0.78
SNF8-205ENST00000507302 MUC21A0A140T8X8 626 aa10.16□□□□□ -0.78
SNF8-205ENST00000507302 RAB5CP51148 216 aa10.16□□□□□ -0.78
SNF8-205ENST00000507302 S100A9P06702 114 aaKnown RBP10.15□□□□□ -0.78
SNF8-205ENST00000507302 AKR1C3P42330 323 aa10.15□□□□□ -0.78
SNF8-205ENST00000507302 MED28Q9H204 178 aa10.15□□□□□ -0.78
SNF8-205ENST00000507302 MUC2Q02817 5179 aa10.14□□□□□ -0.79
SNF8-205ENST00000507302 GAGE12HA6NDE8 117 aa10.14□□□□□ -0.79
SNF8-205ENST00000507302 H7C1H1 209 aa10.14□□□□□ -0.79
SNF8-205ENST00000507302 SMIM17P0DL12 118 aa10.14□□□□□ -0.79
SNF8-205ENST00000507302 Q6ZRP5 223 aa10.14□□□□□ -0.79
SNF8-205ENST00000507302 LYPD6BQ8NI32 183 aa10.14□□□□□ -0.79
SNF8-205ENST00000507302 KRTAP9-2Q9BYQ4 174 aa10.14□□□□□ -0.79
SNF8-205ENST00000507302 LINC00474Q9P2X8 69 aa10.14□□□□□ -0.79
SNF8-205ENST00000507302 MAP1LC3B2A6NCE7 125 aa10.13□□□□□ -0.79
SNF8-205ENST00000507302 Q5BKY6 102 aa10.13□□□□□ -0.79
SNF8-205ENST00000507302 SUMO4Q6EEV6 95 aa10.13□□□□□ -0.79
SNF8-205ENST00000507302 MAP1LC3BQ9GZQ8 125 aa10.13□□□□□ -0.79
SNF8-205ENST00000507302 IGLC6P0CF74 106 aa10.12□□□□□ -0.79
SNF8-205ENST00000507302 HIGD2BQ4VC39 106 aa10.12□□□□□ -0.79
SNF8-205ENST00000507302 BORCS7-ASMTA0A0B4J1R7 106 aa10.11□□□□□ -0.79
SNF8-205ENST00000507302 NKX2-5P52952 324 aaPredicted RBP10.11□□□□□ -0.79
SNF8-205ENST00000507302 AKR1C8PQ5T2L2 129 aa10.11□□□□□ -0.79
SNF8-205ENST00000507302 CST9LP1Q5W188 147 aa10.11□□□□□ -0.79
SNF8-205ENST00000507302 RASL11AQ6T310 242 aa10.11□□□□□ -0.79
SNF8-205ENST00000507302 STOML3Q8TAV4 291 aa10.11□□□□□ -0.79
SNF8-205ENST00000507302 SULT1A2P50226 295 aa10.1□□□□□ -0.79
SNF8-205ENST00000507302 BAGE2Q86Y30 109 aa10.1□□□□□ -0.79
SNF8-205ENST00000507302 NIT2Q9NQR4 276 aa10.1□□□□□ -0.79
SNF8-205ENST00000507302 ALG5Q9Y673 324 aa10.1□□□□□ -0.79
SNF8-205ENST00000507302 DEFA3P59666 94 aa10.09□□□□□ -0.79
SNF8-205ENST00000507302 CHCHD10Q8WYQ3 142 aaPredicted RBP10.09□□□□□ -0.79
SNF8-205ENST00000507302 PKIGQ9Y2B9 76 aa10.09□□□□□ -0.79
SNF8-205ENST00000507302 PAGE4O60829 102 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms