RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 CFHR3Q02985 330 aa11.17□□□□□ -0.62
HERC6-206ENST00000506714 CCL19Q99731 98 aa11.17□□□□□ -0.62
HERC6-206ENST00000506714 ZNF580Q9UK33 172 aa11.17□□□□□ -0.62
HERC6-206ENST00000506714 M0QXV9 152 aa11.16□□□□□ -0.62
HERC6-206ENST00000506714 MDFICQ9P1T7 246 aa11.16□□□□□ -0.62
HERC6-206ENST00000506714 LRRK2Q5S007 2527 aa11.16□□□□□ -0.62
HERC6-206ENST00000506714 SPINK8P0C7L1 97 aa11.16□□□□□ -0.62
HERC6-206ENST00000506714 SNRPD3P62318 126 aaKnown RBP11.16□□□□□ -0.62
HERC6-206ENST00000506714 DEFB104AQ8WTQ1 72 aa11.16□□□□□ -0.62
HERC6-206ENST00000506714 CARD19Q96LW7 228 aa11.16□□□□□ -0.62
HERC6-206ENST00000506714 UBR5O95071 2799 aaPredicted RBP11.16□□□□□ -0.62
HERC6-206ENST00000506714 IGHV4-61A0A0C4DH41 118 aa11.15□□□□□ -0.62
HERC6-206ENST00000506714 I3L3M4 83 aa11.15□□□□□ -0.62
HERC6-206ENST00000506714 C20orf203Q8NBC4 194 aa11.15□□□□□ -0.62
HERC6-206ENST00000506714 PTH2Q96A98 100 aa11.15□□□□□ -0.62
HERC6-206ENST00000506714 IGHV1OR15-1A0A075B7D0 117 aa11.15□□□□□ -0.62
HERC6-206ENST00000506714 A0A0B4J2C4 111 aa11.15□□□□□ -0.62
HERC6-206ENST00000506714 A0A0J9YX75 114 aa11.15□□□□□ -0.62
HERC6-206ENST00000506714 WFDC12Q8WWY7 111 aa11.15□□□□□ -0.62
HERC6-206ENST00000506714 A4D1N5 150 aa11.14□□□□□ -0.63
HERC6-206ENST00000506714 TMEM262E9PQX1 116 aa11.14□□□□□ -0.63
HERC6-206ENST00000506714 ZNF688P0C7X2 276 aa11.14□□□□□ -0.63
HERC6-206ENST00000506714 Q6ZUT4 128 aa11.14□□□□□ -0.63
HERC6-206ENST00000506714 Q8N1Y9 231 aa11.14□□□□□ -0.63
HERC6-206ENST00000506714 UTP20O75691 2785 aaKnown RBP11.14□□□□□ -0.63
HERC6-206ENST00000506714 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.14□□□□□ -0.63
HERC6-206ENST00000506714 RHODO00212 210 aa11.14□□□□□ -0.63
HERC6-206ENST00000506714 P0DMU3 169 aa11.14□□□□□ -0.63
HERC6-206ENST00000506714 FAM231AP0DMU4 169 aa11.14□□□□□ -0.63
HERC6-206ENST00000506714 FAM231CP0DMU5 169 aa11.14□□□□□ -0.63
HERC6-206ENST00000506714 C10orf105Q8TEF2 133 aa11.14□□□□□ -0.63
HERC6-206ENST00000506714 IGHV3-33P01772 117 aa11.13□□□□□ -0.63
HERC6-206ENST00000506714 ZNF22P17026 224 aaPredicted RBP11.13□□□□□ -0.63
HERC6-206ENST00000506714 EDN2P20800 178 aa11.13□□□□□ -0.63
HERC6-206ENST00000506714 ERG28Q9UKR5 140 aa11.13□□□□□ -0.63
HERC6-206ENST00000506714 TMEM263Q8WUH6 116 aaKnown RBP11.12□□□□□ -0.63
HERC6-206ENST00000506714 SPG11Q96JI7 2443 aa11.12□□□□□ -0.63
HERC6-206ENST00000506714 OPRPNQ99935 248 aaPredicted RBP11.12□□□□□ -0.63
HERC6-206ENST00000506714 TRAV12-2A0A075B6T6 113 aa11.11□□□□□ -0.63
HERC6-206ENST00000506714 K7EQG2 157 aa11.11□□□□□ -0.63
HERC6-206ENST00000506714 PSMB8P28062 276 aa11.11□□□□□ -0.63
HERC6-206ENST00000506714 ANKRD29Q8N6D5 301 aa11.11□□□□□ -0.63
HERC6-206ENST00000506714 CRYBG3Q68DQ2 2970 aa11.11□□□□□ -0.63
HERC6-206ENST00000506714 TRGV11A0A075B6L2 103 aa11.11□□□□□ -0.63
HERC6-206ENST00000506714 TRAV2A0A0B4J234 112 aa11.11□□□□□ -0.63
HERC6-206ENST00000506714 TMEM89A2RUT3 159 aa11.11□□□□□ -0.63
HERC6-206ENST00000506714 SLC25A20O43772 301 aa11.11□□□□□ -0.63
HERC6-206ENST00000506714 FHL3Q13643 280 aa11.11□□□□□ -0.63
HERC6-206ENST00000506714 RNF152Q8N8N0 203 aa11.11□□□□□ -0.63
HERC6-206ENST00000506714 PYGO1Q9Y3Y4 419 aa11.11□□□□□ -0.63
HERC6-206ENST00000506714 ASH1LQ9NR48 2969 aaKnown RBP11.1□□□□□ -0.63
HERC6-206ENST00000506714 IGLV4-3A0A075B6K6 122 aa11.1□□□□□ -0.63
HERC6-206ENST00000506714 MT-ATP8P03928 68 aa11.1□□□□□ -0.63
HERC6-206ENST00000506714 XGP55808 180 aa11.1□□□□□ -0.63
HERC6-206ENST00000506714 MUSTN1Q8IVN3 82 aa11.1□□□□□ -0.63
HERC6-206ENST00000506714 RAX2Q96IS3 184 aa11.1□□□□□ -0.63
HERC6-206ENST00000506714 GEMIN7Q9H840 131 aaKnown RBP11.1□□□□□ -0.63
HERC6-206ENST00000506714 EDA2RQ9HAV5 297 aa11.1□□□□□ -0.63
HERC6-206ENST00000506714 M0R2P5 195 aa11.1□□□□□ -0.63
HERC6-206ENST00000506714 IGKV3-20P01619 116 aa11.1□□□□□ -0.63
HERC6-206ENST00000506714 MSMBP08118 114 aa11.1□□□□□ -0.63
HERC6-206ENST00000506714 ATP5J2P56134 94 aa11.1□□□□□ -0.63
HERC6-206ENST00000506714 A0A0J9YXV3 536 aa11.09□□□□□ -0.63
HERC6-206ENST00000506714 C9JAW5 83 aa11.09□□□□□ -0.63
HERC6-206ENST00000506714 SPINK13Q1W4C9 94 aa11.09□□□□□ -0.63
HERC6-206ENST00000506714 TGFAP01135 160 aa11.08□□□□□ -0.64
HERC6-206ENST00000506714 ATXN8Q156A1 80 aa11.08□□□□□ -0.64
HERC6-206ENST00000506714 A0A0J9YXY3 114 aa11.07□□□□□ -0.64
HERC6-206ENST00000506714 LINC01600Q96MT4 127 aa11.07□□□□□ -0.64
HERC6-206ENST00000506714 SVEP1Q4LDE5 3571 aa11.07□□□□□ -0.64
HERC6-206ENST00000506714 EIF4EBP3O60516 100 aaPredicted RBP11.07□□□□□ -0.64
HERC6-206ENST00000506714 TIMM21Q9BVV7 248 aa11.07□□□□□ -0.64
HERC6-206ENST00000506714 CHD6Q8TD26 2715 aa11.07□□□□□ -0.64
HERC6-206ENST00000506714 IGHV3-64A0A075B6Q5 118 aa11.06□□□□□ -0.64
HERC6-206ENST00000506714 MRPS36P82909 103 aaKnown RBP11.06□□□□□ -0.64
HERC6-206ENST00000506714 Q1RN00 199 aa11.06□□□□□ -0.64
HERC6-206ENST00000506714 NRGNQ92686 78 aa11.06□□□□□ -0.64
HERC6-206ENST00000506714 TRBV30A0A0K0K1B3 111 aa11.06□□□□□ -0.64
HERC6-206ENST00000506714 IGHV3-30-3P0DP02 117 aa11.06□□□□□ -0.64
HERC6-206ENST00000506714 KMT2BQ9UMN6 2715 aaPredicted RBP11.06□□□□□ -0.64
HERC6-206ENST00000506714 CD28P10747 220 aa11.05□□□□□ -0.64
HERC6-206ENST00000506714 ANKRD17O75179 2603 aaKnown RBP11.05□□□□□ -0.64
HERC6-206ENST00000506714 B4DSR2 109 aa11.05□□□□□ -0.64
HERC6-206ENST00000506714 H7C2G1 150 aa11.05□□□□□ -0.64
HERC6-206ENST00000506714 GATA3P23771 443 aa11.05□□□□□ -0.64
HERC6-206ENST00000506714 SPXQ9BT56 116 aa11.05□□□□□ -0.64
HERC6-206ENST00000506714 PRRC2AP48634 2157 aaKnown RBP11.04□□□□□ -0.64
HERC6-206ENST00000506714 IGHV4-30-2A0A087WSY4 118 aa11.04□□□□□ -0.64
HERC6-206ENST00000506714 LINC01620Q4KN68 170 aa11.04□□□□□ -0.64
HERC6-206ENST00000506714 SPANXDQ9BXN6 97 aa11.04□□□□□ -0.64
HERC6-206ENST00000506714 SPANXCQ9NY87 97 aa11.04□□□□□ -0.64
HERC6-206ENST00000506714 IGHV1-58A0A0C4DH39 117 aa11.03□□□□□ -0.64
HERC6-206ENST00000506714 ZFAND6Q6FIF0 208 aa11.03□□□□□ -0.64
HERC6-206ENST00000506714 TNFRSF18Q9Y5U5 241 aa11.03□□□□□ -0.64
HERC6-206ENST00000506714 CENPEQ02224 2701 aa11.03□□□□□ -0.64
HERC6-206ENST00000506714 TRAV26-1A0A087WT03 109 aa11.02□□□□□ -0.64
HERC6-206ENST00000506714 PIK3CD-AS1Q5SR53 167 aa11.02□□□□□ -0.64
HERC6-206ENST00000506714 LITAFQ99732 161 aa11.02□□□□□ -0.64
HERC6-206ENST00000506714 USP9YO00507 2555 aaPredicted RBP11.02□□□□□ -0.64
HERC6-206ENST00000506714 SYNJ2BPP57105 145 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms