RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TMEM2Q9UHN6 1383 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 NRXN2Q9P2S2 1712 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 SONP18583 2426 aaKnown RBP0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 FAT3Q8TDW7 4589 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 PHIPQ8WWQ0 1821 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 NBPF19A0A087WUL8 3843 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 BAZ1AQ9NRL2 1556 aaPredicted RBP0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 ITPR1Q14643 2758 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 MXRA5Q9NR99 2828 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 SPTA1P02549 2419 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 IGF2RP11717 2491 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 MTORP42345 2549 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 TRBV10-1A0A0K0K1A3 114 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 K7EP13 123 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 PITX3O75364 302 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 IQCJQ1A5X6 159 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 MIC13Q5XKP0 118 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 Q6ZQY7 126 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 Q6ZUT4 128 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 VSTM2AQ8TAG5 236 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 ARL11Q969Q4 196 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 TMEM191AQ9H0A3 160 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 ATG5Q9H1Y0 275 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 MRPL36Q9P0J6 103 aaKnown RBP0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 NWD2Q9ULI1 1742 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 DNAH14Q0VDD8 3507 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 ASCC3Q8N3C0 2202 aaKnown RBP0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 NF1P21359 2839 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 SHANK2Q9UPX8 1470 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 CRYBG3Q68DQ2 2970 aa0.54□□□□□ -2.32
TOPBP1-204ENST00000505804 EIF4G3O43432 1585 aaKnown RBP0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 SPTBP11277 2137 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 ARFGEF1Q9Y6D6 1849 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 NBDYA0A0U1RRE5 68 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 CXorf51AA0A1B0GTR3 108 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 EFCAB10A6NFE3 127 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 HIGD1CA8MV81 97 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 FXYD3Q14802 87 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 XAF1Q6GPH4 301 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 SCIMPQ6UWF3 145 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 DEFB123Q8N688 67 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 C1orf54Q8WWF1 131 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 SDF2Q99470 211 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 LINC00470Q9BZP3 86 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 XIRP2A4UGR9 3374 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 MUC5ACP98088 5654 aa0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 BLMP54132 1417 aaPredicted RBP0.53□□□□□ -2.32
TOPBP1-204ENST00000505804 MBD5Q9P267 1494 aa0.53□□□□□ -2.33
TOPBP1-204ENST00000505804 FAM186AA6NE01 2351 aa0.53□□□□□ -2.33
TOPBP1-204ENST00000505804 NESP48681 1621 aa0.53□□□□□ -2.33
TOPBP1-204ENST00000505804 RAPGEF6Q8TEU7 1601 aa0.53□□□□□ -2.33
TOPBP1-204ENST00000505804 QRICH2Q9H0J4 1663 aa0.53□□□□□ -2.33
TOPBP1-204ENST00000505804 LOC285556D6RIA3 1793 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 SIPA1L3O60292 1781 aaPredicted RBP0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 SPTBN2O15020 2390 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 TRBV30A0A0K0K1B3 111 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 LOC101927531A0A1B0GV80 90 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 A0A1W2PPM0 123 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 CCDC179H3BU77 68 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 CCKP06307 115 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 PYYP10082 97 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 SLC25A6P12236 298 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 GUCA1AP43080 201 aaPredicted RBP0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 CAV3P56539 151 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 RRAS2P62070 204 aaPredicted RBP0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 SELENOWP63302 87 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 EMX2Q04743 252 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 LINC01545Q5VT33 79 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 Q86TA4 180 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 CCL19Q99731 98 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 PSMG3Q9BT73 122 aaPredicted RBP0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 CCDC167Q9P0B6 97 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 NSD1Q96L73 2696 aaPredicted RBP0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 NCOA3Q9Y6Q9 1424 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 CELSR2Q9HCU4 2923 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 LOC400499M0QZD8 3231 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 MYO15AQ9UKN7 3530 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 PATJQ8NI35 1801 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 MYH8P13535 1937 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 ESPL1Q14674 2120 aa0.52□□□□□ -2.33
TOPBP1-204ENST00000505804 LRBAP50851 2863 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 WDR87Q6ZQQ6 2873 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 WDFY3Q8IZQ1 3526 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 SPENQ96T58 3664 aaKnown RBP0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 DSTQ03001 7570 aaKnown RBP0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 GNG7O60262 68 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 FRYLO94915 3013 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 TFF1P04155 84 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 CFTRP13569 1480 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 DAPK1P53355 1430 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 SPCS2Q15005 226 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 FRYQ5TBA9 3013 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 SPANXN1Q5VSR9 72 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 RPL13AP3Q6NVV1 102 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 Q6ZS92 163 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 NDUFA11Q86Y39 141 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 C5orf56Q8N8D9 126 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 CDH23Q9H251 3354 aa0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 TNS1Q9HBL0 1735 aaKnown RBP0.51□□□□□ -2.33
TOPBP1-204ENST00000505804 IBTKQ9P2D0 1353 aaPredicted RBP0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms