RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 SCGB3A2Q96PL1 93 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 PFDN5Q99471 154 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 GGACTQ9BVM4 153 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 SLC25A2Q9BXI2 301 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 MIXL1Q9H2W2 232 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 PARLQ9H300 379 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 SCP2D1Q9UJQ7 156 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 LENEPQ9Y5L5 61 aa4.28□□□□□ -1.72
VCAN-206ENST00000505615 IGLV9-49A0A0B4J1Y8 123 aa4.27□□□□□ -1.73
VCAN-206ENST00000505615 PGPA6NDG6 321 aa4.27□□□□□ -1.73
VCAN-206ENST00000505615 K7EN84 100 aa4.27□□□□□ -1.73
VCAN-206ENST00000505615 M0R036 132 aa4.27□□□□□ -1.73
VCAN-206ENST00000505615 SFT2D2O95562 160 aa4.27□□□□□ -1.73
VCAN-206ENST00000505615 CRPP02741 224 aa4.27□□□□□ -1.73
VCAN-206ENST00000505615 NKX2-5P52952 324 aaPredicted RBP4.27□□□□□ -1.73
VCAN-206ENST00000505615 TAL2Q16559 108 aa4.27□□□□□ -1.73
VCAN-206ENST00000505615 MPV17L2Q567V2 206 aa4.27□□□□□ -1.73
VCAN-206ENST00000505615 TMEM128Q5BJH2 165 aa4.27□□□□□ -1.73
VCAN-206ENST00000505615 C12orf45Q8N5I9 185 aaPredicted RBP4.27□□□□□ -1.73
VCAN-206ENST00000505615 C15orf40Q8WUR7 153 aa4.27□□□□□ -1.73
VCAN-206ENST00000505615 TVP23CQ96ET8 276 aa4.27□□□□□ -1.73
VCAN-206ENST00000505615 SDF2L1Q9HCN8 221 aa4.27□□□□□ -1.73
VCAN-206ENST00000505615 SLC39A9Q9NUM3 307 aa4.27□□□□□ -1.73
VCAN-206ENST00000505615 TRAV21A0A0B4J279 112 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 FAM24AA6NFZ4 105 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 F6UZH7 168 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 TAAR5O14804 337 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 TCRBP04435 133 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 NBEAP1P0C6P0 100 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 RPL29P47914 159 aaKnown RBP4.26□□□□□ -1.73
VCAN-206ENST00000505615 PPP1R1AQ13522 171 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 PRR4Q16378 134 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 MIAQ16674 131 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 GCSAMLQ5JQS6 135 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 ZFP2Q6ZN57 461 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 OR10G7Q8NGN6 311 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 OR2T35Q8NGX2 323 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 TMED6Q8WW62 240 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 ASB13Q8WXK3 278 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 PSORS1C2Q9UIG4 136 aa4.26□□□□□ -1.73
VCAN-206ENST00000505615 LOC105371267A0A1B0GV96 52 aa4.25□□□□□ -1.73
VCAN-206ENST00000505615 RNASE3P12724 160 aaKnown RBP4.25□□□□□ -1.73
VCAN-206ENST00000505615 RAB4AP20338 218 aa4.25□□□□□ -1.73
VCAN-206ENST00000505615 G0S2P27469 103 aa4.25□□□□□ -1.73
VCAN-206ENST00000505615 FGF8P55075 233 aaPredicted RBP4.25□□□□□ -1.73
VCAN-206ENST00000505615 TAS2R30P59541 319 aa4.25□□□□□ -1.73
VCAN-206ENST00000505615 PDZD11Q5EBL8 140 aa4.25□□□□□ -1.73
VCAN-206ENST00000505615 FXYD5Q96DB9 178 aa4.25□□□□□ -1.73
VCAN-206ENST00000505615 KCNS1Q96KK3 526 aa4.25□□□□□ -1.73
VCAN-206ENST00000505615 C2orf48Q96LS8 159 aa4.25□□□□□ -1.73
VCAN-206ENST00000505615 PACRGQ96M98 296 aaPredicted RBP4.25□□□□□ -1.73
VCAN-206ENST00000505615 MRPS26Q9BYN8 205 aaKnown RBP4.25□□□□□ -1.73
VCAN-206ENST00000505615 PPDPFQ9H3Y8 114 aa4.25□□□□□ -1.73
VCAN-206ENST00000505615 JPT2Q9H910 190 aa4.25□□□□□ -1.73
VCAN-206ENST00000505615 PRR34Q9NV39 138 aa4.25□□□□□ -1.73
VCAN-206ENST00000505615 TRAV26-2A0A0B4J265 109 aa4.24□□□□□ -1.73
VCAN-206ENST00000505615 ANGP03950 147 aaKnown RBP4.24□□□□□ -1.73
VCAN-206ENST00000505615 S100A12P80511 92 aa4.24□□□□□ -1.73
VCAN-206ENST00000505615 COX6A2Q02221 97 aa4.24□□□□□ -1.73
VCAN-206ENST00000505615 GAGE6Q13070 117 aa4.24□□□□□ -1.73
VCAN-206ENST00000505615 CLPSL2Q6UWE3 100 aa4.24□□□□□ -1.73
VCAN-206ENST00000505615 MIR17HGQ75NE6 70 aa4.24□□□□□ -1.73
VCAN-206ENST00000505615 ZFP82Q8N141 532 aa4.24□□□□□ -1.73
VCAN-206ENST00000505615 ZNF664Q8N3J9 261 aa4.24□□□□□ -1.73
VCAN-206ENST00000505615 STPG4Q8N801 248 aa4.24□□□□□ -1.73
VCAN-206ENST00000505615 TMEM75Q8N9X5 138 aa4.24□□□□□ -1.73
VCAN-206ENST00000505615 PRSS3P2Q8NHM4 247 aa4.24□□□□□ -1.73
VCAN-206ENST00000505615 DYNC2LI1Q8TCX1 351 aa4.24□□□□□ -1.73
VCAN-206ENST00000505615 IGLV5-45A0A087WSX0 123 aa4.23□□□□□ -1.73
VCAN-206ENST00000505615 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.23□□□□□ -1.73
VCAN-206ENST00000505615 IGKV2-24A0A0C4DH68 120 aa4.23□□□□□ -1.73
VCAN-206ENST00000505615 C7orf66A4D0T2 115 aa4.23□□□□□ -1.73
VCAN-206ENST00000505615 A8MWV9 139 aa4.23□□□□□ -1.73
VCAN-206ENST00000505615 TMEM262E9PQX1 116 aa4.23□□□□□ -1.73
VCAN-206ENST00000505615 CSN1S1P47710 185 aa4.23□□□□□ -1.73
VCAN-206ENST00000505615 ZNF80P51504 273 aaPredicted RBP4.23□□□□□ -1.73
VCAN-206ENST00000505615 UBE2D3P61077 147 aa4.23□□□□□ -1.73
VCAN-206ENST00000505615 UBE2D2P62837 147 aa4.23□□□□□ -1.73
VCAN-206ENST00000505615 Q6ZRP5 223 aa4.23□□□□□ -1.73
VCAN-206ENST00000505615 MRPL52Q86TS9 123 aaKnown RBP4.23□□□□□ -1.73
VCAN-206ENST00000505615 OR2G3Q8NGZ4 309 aa4.23□□□□□ -1.73
VCAN-206ENST00000505615 MPLKIPQ8TAP9 179 aa4.23□□□□□ -1.73
VCAN-206ENST00000505615 AP3S1Q92572 193 aa4.23□□□□□ -1.73
VCAN-206ENST00000505615 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
VCAN-206ENST00000505615 TRBV6-8A0A0A6YYG3 113 aa4.22□□□□□ -1.73
VCAN-206ENST00000505615 UBE2L5PA0A1B0GUS4 154 aa4.22□□□□□ -1.73
VCAN-206ENST00000505615 GATCO43716 136 aaKnown RBP4.22□□□□□ -1.73
VCAN-206ENST00000505615 RANP62826 216 aaKnown RBP4.22□□□□□ -1.73
VCAN-206ENST00000505615 CACNG7P62955 275 aa4.22□□□□□ -1.73
VCAN-206ENST00000505615 C11orf1Q9H5F2 150 aa4.22□□□□□ -1.73
VCAN-206ENST00000505615 UQCC1Q9NVA1 299 aa4.22□□□□□ -1.73
VCAN-206ENST00000505615 IGLV10-54A0A075B6I4 117 aa4.21□□□□□ -1.74
VCAN-206ENST00000505615 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
VCAN-206ENST00000505615 A0A096LNI7 61 aa4.21□□□□□ -1.74
VCAN-206ENST00000505615 CST7O76096 145 aa4.21□□□□□ -1.74
VCAN-206ENST00000505615 RBX1P62877 108 aa4.21□□□□□ -1.74
VCAN-206ENST00000505615 BAXQ07812 192 aa4.21□□□□□ -1.74
VCAN-206ENST00000505615 LGALSLQ3ZCW2 172 aaPredicted RBP4.21□□□□□ -1.74
VCAN-206ENST00000505615 GOLT1AQ6ZVE7 132 aa4.21□□□□□ -1.74
VCAN-206ENST00000505615 LINC00269Q8N2A0 174 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms