RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 RASL10AQ92737 203 aa5.85□□□□□ -1.47
PDGFC-204ENST00000504672 PTH2Q96A98 100 aa5.85□□□□□ -1.47
PDGFC-204ENST00000504672 ZC2HC1AQ96GY0 325 aa5.85□□□□□ -1.47
PDGFC-204ENST00000504672 NDFIP1Q9BT67 221 aa5.85□□□□□ -1.47
PDGFC-204ENST00000504672 EIF5A2Q9GZV4 153 aaKnown RBP5.85□□□□□ -1.47
PDGFC-204ENST00000504672 TREM1Q9NP99 234 aa5.85□□□□□ -1.47
PDGFC-204ENST00000504672 TRAV8-3A0A0A6YYJ7 113 aa5.84□□□□□ -1.47
PDGFC-204ENST00000504672 FABP5P3A8MUU1 101 aa5.84□□□□□ -1.47
PDGFC-204ENST00000504672 UBE2G1P62253 170 aa5.84□□□□□ -1.47
PDGFC-204ENST00000504672 CENPWQ5EE01 88 aa5.84□□□□□ -1.47
PDGFC-204ENST00000504672 SH2D6Q7Z4S9 175 aa5.84□□□□□ -1.47
PDGFC-204ENST00000504672 CLRN3Q8NCR9 226 aa5.84□□□□□ -1.47
PDGFC-204ENST00000504672 BIN3Q9NQY0 253 aa5.84□□□□□ -1.47
PDGFC-204ENST00000504672 C11orf21Q9P2W6 132 aa5.84□□□□□ -1.47
PDGFC-204ENST00000504672 IGHV3-73A0A0B4J1V6 119 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 TRAV4A0A0B4J268 109 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 TMEM218A2RU14 115 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 K7EN84 100 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 GNRH2O43555 120 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 GATA1P15976 413 aaPredicted RBP5.83□□□□□ -1.48
PDGFC-204ENST00000504672 GNG4P50150 75 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 LAGE3Q14657 143 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 CT83Q5H943 113 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 PIK3CD-AS1Q5SR53 167 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 FAM162BQ5T6X4 162 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 LELP1Q5T871 98 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 Q6ZRU5 148 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 PRNTQ86SH4 94 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 LINC01551Q86U37 167 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 SLC25A29Q8N8R3 303 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 OCC1Q8TAD7 63 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 SMIM7Q9BQ49 75 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 SDF2L1Q9HCN8 221 aa5.83□□□□□ -1.48
PDGFC-204ENST00000504672 IGKV2D-24A0A075B6R9 120 aa5.82□□□□□ -1.48
PDGFC-204ENST00000504672 IGKV3D-20A0A0C4DH25 116 aa5.82□□□□□ -1.48
PDGFC-204ENST00000504672 PANO1I0J062 215 aa5.82□□□□□ -1.48
PDGFC-204ENST00000504672 ADCYAP1P18509 176 aa5.82□□□□□ -1.48
PDGFC-204ENST00000504672 FOXA3P55318 350 aaPredicted RBP5.82□□□□□ -1.48
PDGFC-204ENST00000504672 NDUFA5Q16718 116 aa5.82□□□□□ -1.48
PDGFC-204ENST00000504672 KCNS1Q96KK3 526 aa5.82□□□□□ -1.48
PDGFC-204ENST00000504672 SGK494Q96LW2 274 aa5.82□□□□□ -1.48
PDGFC-204ENST00000504672 SPXQ9BT56 116 aa5.82□□□□□ -1.48
PDGFC-204ENST00000504672 SSBP4Q9BWG4 385 aaPredicted RBP5.82□□□□□ -1.48
PDGFC-204ENST00000504672 SEC11CQ9BY50 192 aa5.82□□□□□ -1.48
PDGFC-204ENST00000504672 DPH3P1Q9H4G8 78 aa5.82□□□□□ -1.48
PDGFC-204ENST00000504672 NAT8Q9UHE5 227 aa5.82□□□□□ -1.48
PDGFC-204ENST00000504672 NAGKQ9UJ70 344 aa5.82□□□□□ -1.48
PDGFC-204ENST00000504672 RPH3ALQ9UNE2 315 aa5.82□□□□□ -1.48
PDGFC-204ENST00000504672 CARHSP1Q9Y2V2 147 aaKnown RBP5.82□□□□□ -1.48
PDGFC-204ENST00000504672 MUC2Q02817 5179 aa5.81□□□□□ -1.48
PDGFC-204ENST00000504672 FAM231BA6NCW3 169 aa5.81□□□□□ -1.48
PDGFC-204ENST00000504672 ZNF727A8MUV8 499 aa5.81□□□□□ -1.48
PDGFC-204ENST00000504672 KRBOX1C9JBD0 128 aa5.81□□□□□ -1.48
PDGFC-204ENST00000504672 SH2D1AO60880 128 aa5.81□□□□□ -1.48
PDGFC-204ENST00000504672 RPL23P62829 140 aaKnown RBP5.81□□□□□ -1.48
PDGFC-204ENST00000504672 PNRC1Q12796 327 aaPredicted RBP5.81□□□□□ -1.48
PDGFC-204ENST00000504672 TMEM241Q24JQ0 296 aa5.81□□□□□ -1.48
PDGFC-204ENST00000504672 COMMD7Q86VX2 200 aa5.81□□□□□ -1.48
PDGFC-204ENST00000504672 ATP6V0E2Q8NHE4 81 aa5.81□□□□□ -1.48
PDGFC-204ENST00000504672 C9orf85Q96MD7 179 aa5.81□□□□□ -1.48
PDGFC-204ENST00000504672 CNFNQ9BYD5 112 aa5.81□□□□□ -1.48
PDGFC-204ENST00000504672 GTSF1LQ9H1H1 148 aa5.81□□□□□ -1.48
PDGFC-204ENST00000504672 OSTCQ9NRP0 149 aa5.81□□□□□ -1.48
PDGFC-204ENST00000504672 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.81□□□□□ -1.48
PDGFC-204ENST00000504672 PGPEP1LA6NFU8 196 aa5.8□□□□□ -1.48
PDGFC-204ENST00000504672 SNAI2O43623 268 aa5.8□□□□□ -1.48
PDGFC-204ENST00000504672 FAM159AQ6UWV7 190 aa5.8□□□□□ -1.48
PDGFC-204ENST00000504672 ISOC2Q96AB3 205 aa5.8□□□□□ -1.48
PDGFC-204ENST00000504672 IL36BQ9NZH7 164 aa5.8□□□□□ -1.48
PDGFC-204ENST00000504672 FAT4Q6V0I7 4981 aa5.79□□□□□ -1.48
PDGFC-204ENST00000504672 TRGV11A0A075B6L2 103 aa5.79□□□□□ -1.48
PDGFC-204ENST00000504672 M0R2P5 195 aa5.79□□□□□ -1.48
PDGFC-204ENST00000504672 TYMSP04818 313 aa5.79□□□□□ -1.48
PDGFC-204ENST00000504672 OR5AL1P0C617 328 aa5.79□□□□□ -1.48
PDGFC-204ENST00000504672 IGLC6P0CF74 106 aa5.79□□□□□ -1.48
PDGFC-204ENST00000504672 RNASE3P12724 160 aaKnown RBP5.79□□□□□ -1.48
PDGFC-204ENST00000504672 WDR73Q6P4I2 378 aa5.79□□□□□ -1.48
PDGFC-204ENST00000504672 NUDT10Q8NFP7 164 aa5.79□□□□□ -1.48
PDGFC-204ENST00000504672 NUDT11Q96G61 164 aa5.79□□□□□ -1.48
PDGFC-204ENST00000504672 PRADC1Q9BSG0 188 aa5.79□□□□□ -1.48
PDGFC-204ENST00000504672 GFRA4Q9GZZ7 299 aa5.79□□□□□ -1.48
PDGFC-204ENST00000504672 Q9UF83 564 aa5.79□□□□□ -1.48
PDGFC-204ENST00000504672 KLK12Q9UKR0 248 aa5.79□□□□□ -1.48
PDGFC-204ENST00000504672 COX11Q9Y6N1 276 aa5.79□□□□□ -1.48
PDGFC-204ENST00000504672 GAGE12JA6NER3 117 aa5.78□□□□□ -1.48
PDGFC-204ENST00000504672 B4DEV8 164 aa5.78□□□□□ -1.48
PDGFC-204ENST00000504672 RPS20P60866 119 aaKnown RBP5.78□□□□□ -1.48
PDGFC-204ENST00000504672 GAGE1Q13065 139 aa5.78□□□□□ -1.48
PDGFC-204ENST00000504672 GAGE4Q13068 117 aa5.78□□□□□ -1.48
PDGFC-204ENST00000504672 GAGE5Q13069 117 aa5.78□□□□□ -1.48
PDGFC-204ENST00000504672 GAGE13Q4V321 117 aa5.78□□□□□ -1.48
PDGFC-204ENST00000504672 UBE2WQ96B02 151 aa5.78□□□□□ -1.48
PDGFC-204ENST00000504672 RMI2Q96E14 147 aa5.78□□□□□ -1.48
PDGFC-204ENST00000504672 DPH3Q96FX2 82 aa5.78□□□□□ -1.48
PDGFC-204ENST00000504672 TMEM242Q9NWH2 141 aa5.78□□□□□ -1.48
PDGFC-204ENST00000504672 V9GYV3 84 aa5.78□□□□□ -1.48
PDGFC-204ENST00000504672 CTRLP40313 264 aa5.77□□□□□ -1.49
PDGFC-204ENST00000504672 RHOHQ15669 191 aa5.77□□□□□ -1.49
PDGFC-204ENST00000504672 CFAP126Q5VTH2 177 aa5.77□□□□□ -1.49
PDGFC-204ENST00000504672 SFRP2Q96HF1 295 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms