RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 C1orf43Q9BWL3 253 aa7.37□□□□□ -1.23
TPM3-217ENST00000504663 DKK2Q9UBU2 259 aa7.37□□□□□ -1.23
TPM3-217ENST00000504663 LINC01546A6NGU7 62 aa7.36□□□□□ -1.23
TPM3-217ENST00000504663 DEFB4AO15263 64 aa7.36□□□□□ -1.23
TPM3-217ENST00000504663 FAM74A4Q5TZK3 123 aa7.36□□□□□ -1.23
TPM3-217ENST00000504663 ZFP2Q6ZN57 461 aa7.36□□□□□ -1.23
TPM3-217ENST00000504663 SMIM15Q7Z3B0 74 aa7.36□□□□□ -1.23
TPM3-217ENST00000504663 LAMTOR2Q9Y2Q5 125 aa7.36□□□□□ -1.23
TPM3-217ENST00000504663 A0A096LNJ9 63 aa7.35□□□□□ -1.23
TPM3-217ENST00000504663 IGHV3-73A0A0B4J1V6 119 aa7.35□□□□□ -1.23
TPM3-217ENST00000504663 TRBV6-5A0A0K0K1A5 114 aa7.35□□□□□ -1.23
TPM3-217ENST00000504663 GAGE12BA1L429 117 aa7.35□□□□□ -1.23
TPM3-217ENST00000504663 LYRM9A8MSI8 78 aa7.35□□□□□ -1.23
TPM3-217ENST00000504663 GAGE7O76087 117 aa7.35□□□□□ -1.23
TPM3-217ENST00000504663 IGHV3-53P01767 116 aa7.35□□□□□ -1.23
TPM3-217ENST00000504663 GAGE12FP0CL80 117 aa7.35□□□□□ -1.23
TPM3-217ENST00000504663 GAGE12GP0CL81 117 aa7.35□□□□□ -1.23
TPM3-217ENST00000504663 GAGE12IP0CL82 117 aa7.35□□□□□ -1.23
TPM3-217ENST00000504663 P0DMU3 169 aa7.35□□□□□ -1.23
TPM3-217ENST00000504663 FAM231AP0DMU4 169 aa7.35□□□□□ -1.23
TPM3-217ENST00000504663 FAM231CP0DMU5 169 aa7.35□□□□□ -1.23
TPM3-217ENST00000504663 FAM222AQ5U5X8 452 aa7.35□□□□□ -1.23
TPM3-217ENST00000504663 C11orf68Q9H3H3 251 aaKnown RBP7.35□□□□□ -1.23
TPM3-217ENST00000504663 DNAH7Q8WXX0 4024 aa7.34□□□□□ -1.23
TPM3-217ENST00000504663 RHODO00212 210 aa7.34□□□□□ -1.23
TPM3-217ENST00000504663 LINC00694P0DN24 101 aa7.34□□□□□ -1.23
TPM3-217ENST00000504663 IFI27P40305 119 aaPredicted RBP7.34□□□□□ -1.23
TPM3-217ENST00000504663 POLR2KP53803 58 aaKnown RBP7.34□□□□□ -1.23
TPM3-217ENST00000504663 EMP1P54849 157 aa7.34□□□□□ -1.23
TPM3-217ENST00000504663 RPL32P62910 135 aaKnown RBP7.34□□□□□ -1.23
TPM3-217ENST00000504663 FHL2Q14192 279 aa7.34□□□□□ -1.23
TPM3-217ENST00000504663 ZNF56Q15929 161 aa7.34□□□□□ -1.23
TPM3-217ENST00000504663 NIT1Q86X76 327 aa7.34□□□□□ -1.23
TPM3-217ENST00000504663 COL7A1Q02388 2944 aa7.34□□□□□ -1.24
TPM3-217ENST00000504663 SMIM17P0DL12 118 aa7.33□□□□□ -1.24
TPM3-217ENST00000504663 NEXN-AS1Q8NBZ9 246 aa7.33□□□□□ -1.24
TPM3-217ENST00000504663 OR4C5Q8NGB2 326 aa7.33□□□□□ -1.24
TPM3-217ENST00000504663 SUMO2P61956 95 aaKnown RBP7.32□□□□□ -1.24
TPM3-217ENST00000504663 PDZD11Q5EBL8 140 aa7.32□□□□□ -1.24
TPM3-217ENST00000504663 BAGE3Q86Y29 109 aa7.32□□□□□ -1.24
TPM3-217ENST00000504663 Q8N8P6 123 aa7.32□□□□□ -1.24
TPM3-217ENST00000504663 HIST1H2BLQ99880 126 aa7.32□□□□□ -1.24
TPM3-217ENST00000504663 C20orf78Q9BR46 151 aa7.32□□□□□ -1.24
TPM3-217ENST00000504663 TMEM70Q9BUB7 260 aa7.32□□□□□ -1.24
TPM3-217ENST00000504663 SMIM2Q9BVW6 85 aa7.32□□□□□ -1.24
TPM3-217ENST00000504663 MAP1LC3AQ9H492 121 aa7.32□□□□□ -1.24
TPM3-217ENST00000504663 IGHV1-24A0A0C4DH33 117 aa7.31□□□□□ -1.24
TPM3-217ENST00000504663 LOC389332A0A1B0GUA5 103 aa7.31□□□□□ -1.24
TPM3-217ENST00000504663 S100A6P06703 90 aa7.31□□□□□ -1.24
TPM3-217ENST00000504663 BTF3P20290 206 aaKnown RBP7.31□□□□□ -1.24
TPM3-217ENST00000504663 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
TPM3-217ENST00000504663 NEGR1Q7Z3B1 354 aa7.31□□□□□ -1.24
TPM3-217ENST00000504663 SLC25A29Q8N8R3 303 aa7.31□□□□□ -1.24
TPM3-217ENST00000504663 CHCHD1Q96BP2 118 aaKnown RBP7.31□□□□□ -1.24
TPM3-217ENST00000504663 SPATA25Q9BR10 227 aa7.31□□□□□ -1.24
TPM3-217ENST00000504663 TRGV2A0A075B6R0 118 aa7.3□□□□□ -1.24
TPM3-217ENST00000504663 TRBV27A0A0K0K1C4 114 aa7.3□□□□□ -1.24
TPM3-217ENST00000504663 LOC100131303A0A0U1RQF7 123 aa7.3□□□□□ -1.24
TPM3-217ENST00000504663 SDHAF1A6NFY7 115 aa7.3□□□□□ -1.24
TPM3-217ENST00000504663 F5H697 171 aa7.3□□□□□ -1.24
TPM3-217ENST00000504663 K7EQD1 137 aa7.3□□□□□ -1.24
TPM3-217ENST00000504663 LINC00614P0C842 121 aa7.3□□□□□ -1.24
TPM3-217ENST00000504663 DEFB130BP0DP73 79 aa7.3□□□□□ -1.24
TPM3-217ENST00000504663 DEFB130AP0DP74 79 aa7.3□□□□□ -1.24
TPM3-217ENST00000504663 C12orf74Q32Q52 190 aa7.3□□□□□ -1.24
TPM3-217ENST00000504663 RNASEKQ6P5S7 137 aaKnown RBP7.3□□□□□ -1.24
TPM3-217ENST00000504663 FAM19A2Q8N3H0 131 aa7.3□□□□□ -1.24
TPM3-217ENST00000504663 B9D2Q9BPU9 175 aa7.3□□□□□ -1.24
TPM3-217ENST00000504663 NIT2Q9NQR4 276 aa7.3□□□□□ -1.24
TPM3-217ENST00000504663 DNAH1Q9P2D7 4330 aa7.29□□□□□ -1.24
TPM3-217ENST00000504663 A0A0J9YWU9 116 aa7.29□□□□□ -1.24
TPM3-217ENST00000504663 TRBV6-4A0A1B0GX49 114 aa7.29□□□□□ -1.24
TPM3-217ENST00000504663 CIDEAO60543 219 aa7.29□□□□□ -1.24
TPM3-217ENST00000504663 TSHBP01222 138 aa7.29□□□□□ -1.24
TPM3-217ENST00000504663 PMCHL1Q16048 86 aa7.29□□□□□ -1.24
TPM3-217ENST00000504663 MRAPQ8TCY5 172 aa7.29□□□□□ -1.24
TPM3-217ENST00000504663 PACRGQ96M98 296 aaPredicted RBP7.29□□□□□ -1.24
TPM3-217ENST00000504663 ST20Q9HBF5 79 aa7.29□□□□□ -1.24
TPM3-217ENST00000504663 NXT2Q9NPJ8 142 aaKnown RBP7.29□□□□□ -1.24
TPM3-217ENST00000504663 STAB2Q8WWQ8 2551 aa7.29□□□□□ -1.24
TPM3-217ENST00000504663 TRBV10-1A0A0K0K1A3 114 aa7.28□□□□□ -1.24
TPM3-217ENST00000504663 TCAPO15273 167 aa7.28□□□□□ -1.24
TPM3-217ENST00000504663 PPP1R17O96001 155 aa7.28□□□□□ -1.24
TPM3-217ENST00000504663 SPART-AS1P0CW21 52 aa7.28□□□□□ -1.24
TPM3-217ENST00000504663 PMCHP20382 165 aa7.28□□□□□ -1.24
TPM3-217ENST00000504663 CRYBA4P53673 196 aa7.28□□□□□ -1.24
TPM3-217ENST00000504663 DEFB121Q5J5C9 76 aa7.28□□□□□ -1.24
TPM3-217ENST00000504663 LINC00173Q6ZV60 143 aa7.28□□□□□ -1.24
TPM3-217ENST00000504663 VSIG2Q96IQ7 327 aa7.28□□□□□ -1.24
TPM3-217ENST00000504663 PLECQ15149 4684 aaKnown RBP7.28□□□□□ -1.24
TPM3-217ENST00000504663 PRSS29PA6NIE9 313 aa7.27□□□□□ -1.25
TPM3-217ENST00000504663 H7C1H1 209 aa7.27□□□□□ -1.25
TPM3-217ENST00000504663 FABP4P15090 132 aa7.27□□□□□ -1.25
TPM3-217ENST00000504663 UBE2D3P61077 147 aa7.27□□□□□ -1.25
TPM3-217ENST00000504663 DAD1P61803 113 aa7.27□□□□□ -1.25
TPM3-217ENST00000504663 UBE2D2P62837 147 aa7.27□□□□□ -1.25
TPM3-217ENST00000504663 LCE2AQ5TA79 106 aaPredicted RBP7.27□□□□□ -1.25
TPM3-217ENST00000504663 FA2HQ7L5A8 372 aa7.27□□□□□ -1.25
TPM3-217ENST00000504663 PRSS3P2Q8NHM4 247 aa7.27□□□□□ -1.25
TPM3-217ENST00000504663 DNAJC30Q96LL9 226 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms