RNA–Protein interactions for RNA: ENST00000504355.5

PDLIM3-205, Transcript of PDZ and LIM domain 3, humanhuman

TSL 3

Gene PDLIM3, Length 510 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-205ENST00000504355 C19orf71A6NCJ1 209 aa10.93□□□□□ -0.66
PDLIM3-205ENST00000504355 RBFOX3A6NFN3 312 aa10.93□□□□□ -0.66
PDLIM3-205ENST00000504355 MGPP08493 103 aa10.93□□□□□ -0.66
PDLIM3-205ENST00000504355 KRTAP10-1P60331 282 aa10.93□□□□□ -0.66
PDLIM3-205ENST00000504355 KLK12Q9UKR0 248 aa10.93□□□□□ -0.66
PDLIM3-205ENST00000504355 COX11Q9Y6N1 276 aa10.93□□□□□ -0.66
PDLIM3-205ENST00000504355 HERC1Q15751 4861 aa10.92□□□□□ -0.66
PDLIM3-205ENST00000504355 CACNG7P62955 275 aa10.92□□□□□ -0.66
PDLIM3-205ENST00000504355 BLOC1S1P78537 153 aa10.92□□□□□ -0.66
PDLIM3-205ENST00000504355 ALKAL2Q6UX46 152 aa10.92□□□□□ -0.66
PDLIM3-205ENST00000504355 CHCHD7Q9BUK0 85 aa10.92□□□□□ -0.66
PDLIM3-205ENST00000504355 TRBV20OR9-2A0A075B6H5 130 aa10.91□□□□□ -0.66
PDLIM3-205ENST00000504355 IGKV2D-24A0A075B6R9 120 aa10.91□□□□□ -0.66
PDLIM3-205ENST00000504355 TRBV6-8A0A0A6YYG3 113 aa10.91□□□□□ -0.66
PDLIM3-205ENST00000504355 F2Z2F3 143 aa10.91□□□□□ -0.66
PDLIM3-205ENST00000504355 IGLC6P0CF74 106 aa10.91□□□□□ -0.66
PDLIM3-205ENST00000504355 TMEM97Q5BJF2 176 aa10.9□□□□□ -0.66
PDLIM3-205ENST00000504355 UBE2WQ96B02 151 aa10.9□□□□□ -0.66
PDLIM3-205ENST00000504355 CHCHD5Q9BSY4 110 aa10.9□□□□□ -0.66
PDLIM3-205ENST00000504355 KIF25-AS1Q9Y6Z4 181 aa10.9□□□□□ -0.66
PDLIM3-205ENST00000504355 H7C1H1 209 aa10.89□□□□□ -0.67
PDLIM3-205ENST00000504355 LECT2O14960 151 aa10.89□□□□□ -0.67
PDLIM3-205ENST00000504355 LYZL1Q6UWQ5 148 aa10.89□□□□□ -0.67
PDLIM3-205ENST00000504355 NUDT10Q8NFP7 164 aa10.89□□□□□ -0.67
PDLIM3-205ENST00000504355 NUDT11Q96G61 164 aa10.89□□□□□ -0.67
PDLIM3-205ENST00000504355 EPM2AB3EWF7 344 aa10.88□□□□□ -0.67
PDLIM3-205ENST00000504355 TRGC1P0CF51 173 aa10.88□□□□□ -0.67
PDLIM3-205ENST00000504355 XGP55808 180 aa10.88□□□□□ -0.67
PDLIM3-205ENST00000504355 PKIAP61925 76 aa10.88□□□□□ -0.67
PDLIM3-205ENST00000504355 Q0VG73 95 aa10.88□□□□□ -0.67
PDLIM3-205ENST00000504355 BAALCQ8WXS3 180 aa10.88□□□□□ -0.67
PDLIM3-205ENST00000504355 CRPP02741 224 aa10.87□□□□□ -0.67
PDLIM3-205ENST00000504355 ANGP03950 147 aaKnown RBP10.87□□□□□ -0.67
PDLIM3-205ENST00000504355 NTF3P20783 257 aa10.87□□□□□ -0.67
PDLIM3-205ENST00000504355 CEBPGP53567 150 aa10.87□□□□□ -0.67
PDLIM3-205ENST00000504355 C15orf54Q8N8G6 183 aa10.87□□□□□ -0.67
PDLIM3-205ENST00000504355 OCC1Q8TAD7 63 aa10.87□□□□□ -0.67
PDLIM3-205ENST00000504355 DNAJC30Q96LL9 226 aa10.87□□□□□ -0.67
PDLIM3-205ENST00000504355 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.86□□□□□ -0.67
PDLIM3-205ENST00000504355 WFDC2Q14508 124 aa10.86□□□□□ -0.67
PDLIM3-205ENST00000504355 RNASE7Q9H1E1 156 aaKnown RBP10.86□□□□□ -0.67
PDLIM3-205ENST00000504355 DPH3P1Q9H4G8 78 aa10.86□□□□□ -0.67
PDLIM3-205ENST00000504355 RPP21Q9H633 154 aaKnown RBP10.86□□□□□ -0.67
PDLIM3-205ENST00000504355 TRBV25-1A0A075B6N4 114 aa10.85□□□□□ -0.67
PDLIM3-205ENST00000504355 TMEM250H0YL14 139 aa10.85□□□□□ -0.67
PDLIM3-205ENST00000504355 M0QY20 66 aa10.85□□□□□ -0.67
PDLIM3-205ENST00000504355 TWIST1Q15672 202 aa10.85□□□□□ -0.67
PDLIM3-205ENST00000504355 MPV17L2Q567V2 206 aa10.85□□□□□ -0.67
PDLIM3-205ENST00000504355 SUMO4Q6EEV6 95 aa10.85□□□□□ -0.67
PDLIM3-205ENST00000504355 Q8N976 141 aa10.85□□□□□ -0.67
PDLIM3-205ENST00000504355 FRZBQ92765 325 aa10.85□□□□□ -0.67
PDLIM3-205ENST00000504355 C1orf43Q9BWL3 253 aa10.85□□□□□ -0.67
PDLIM3-205ENST00000504355 K7EN84 100 aa10.84□□□□□ -0.67
PDLIM3-205ENST00000504355 NKX2-5P52952 324 aaPredicted RBP10.84□□□□□ -0.67
PDLIM3-205ENST00000504355 WDR73Q6P4I2 378 aa10.84□□□□□ -0.67
PDLIM3-205ENST00000504355 RASL11AQ6T310 242 aa10.84□□□□□ -0.67
PDLIM3-205ENST00000504355 NTM-AS1Q6ZSK4 140 aa10.84□□□□□ -0.67
PDLIM3-205ENST00000504355 TMEM70Q9BUB7 260 aa10.84□□□□□ -0.67
PDLIM3-205ENST00000504355 EIF5A2Q9GZV4 153 aaKnown RBP10.84□□□□□ -0.67
PDLIM3-205ENST00000504355 IGHV1-24A0A0C4DH33 117 aa10.83□□□□□ -0.68
PDLIM3-205ENST00000504355 SMR3BP02814 79 aaPredicted RBP10.83□□□□□ -0.68
PDLIM3-205ENST00000504355 INAFM2P0DMQ5 153 aa10.83□□□□□ -0.68
PDLIM3-205ENST00000504355 CTRLP40313 264 aa10.83□□□□□ -0.68
PDLIM3-205ENST00000504355 GAGE6Q13070 117 aa10.83□□□□□ -0.68
PDLIM3-205ENST00000504355 ATRAIDQ6UW56 229 aa10.83□□□□□ -0.68
PDLIM3-205ENST00000504355 GATCO43716 136 aaKnown RBP10.82□□□□□ -0.68
PDLIM3-205ENST00000504355 HAMPP81172 84 aa10.82□□□□□ -0.68
PDLIM3-205ENST00000504355 ENHOQ6UWT2 76 aa10.82□□□□□ -0.68
PDLIM3-205ENST00000504355 SMIM15Q7Z3B0 74 aa10.82□□□□□ -0.68
PDLIM3-205ENST00000504355 LYPD6BQ8NI32 183 aa10.82□□□□□ -0.68
PDLIM3-205ENST00000504355 NIT2Q9NQR4 276 aa10.82□□□□□ -0.68
PDLIM3-205ENST00000504355 Q5VSD8 79 aa10.81□□□□□ -0.68
PDLIM3-205ENST00000504355 RBX1P62877 108 aa10.8□□□□□ -0.68
PDLIM3-205ENST00000504355 IQCJQ1A5X6 159 aa10.8□□□□□ -0.68
PDLIM3-205ENST00000504355 DMBT1Q9UGM3 2413 aaPredicted RBP10.79□□□□□ -0.68
PDLIM3-205ENST00000504355 A0A1B0GVG6 124 aa10.79□□□□□ -0.68
PDLIM3-205ENST00000504355 A8MWL6 223 aa10.79□□□□□ -0.68
PDLIM3-205ENST00000504355 FAM229AH3BQW9 127 aa10.79□□□□□ -0.68
PDLIM3-205ENST00000504355 HLA-DQA1P01909 254 aa10.79□□□□□ -0.68
PDLIM3-205ENST00000504355 MIAQ16674 131 aa10.79□□□□□ -0.68
PDLIM3-205ENST00000504355 C14orf177Q52M58 125 aa10.79□□□□□ -0.68
PDLIM3-205ENST00000504355 CLPSL2Q6UWE3 100 aa10.79□□□□□ -0.68
PDLIM3-205ENST00000504355 SMIM7Q9BQ49 75 aa10.79□□□□□ -0.68
PDLIM3-205ENST00000504355 CNFNQ9BYD5 112 aa10.79□□□□□ -0.68
PDLIM3-205ENST00000504355 UBE2L6O14933 153 aa10.78□□□□□ -0.68
PDLIM3-205ENST00000504355 FAM231DQ6ZW35 169 aa10.78□□□□□ -0.68
PDLIM3-205ENST00000504355 LINC00269Q8N2A0 174 aa10.78□□□□□ -0.68
PDLIM3-205ENST00000504355 DEFB104AQ8WTQ1 72 aa10.78□□□□□ -0.68
PDLIM3-205ENST00000504355 GTSF1Q8WW33 167 aa10.78□□□□□ -0.68
PDLIM3-205ENST00000504355 BORCS7Q96B45 105 aa10.78□□□□□ -0.68
PDLIM3-205ENST00000504355 PGLYRP4Q96LB8 373 aa10.78□□□□□ -0.68
PDLIM3-205ENST00000504355 TMEM243Q9BU79 118 aa10.78□□□□□ -0.68
PDLIM3-205ENST00000504355 FAM30AQ9NZY2 134 aa10.78□□□□□ -0.68
PDLIM3-205ENST00000504355 COTL1Q14019 142 aa10.77□□□□□ -0.69
PDLIM3-205ENST00000504355 FAM210AQ96ND0 272 aa10.77□□□□□ -0.69
PDLIM3-205ENST00000504355 FAT1Q14517 4588 aa10.77□□□□□ -0.69
PDLIM3-205ENST00000504355 TRAV26-2A0A0B4J265 109 aa10.76□□□□□ -0.69
PDLIM3-205ENST00000504355 ZNF727A8MUV8 499 aa10.76□□□□□ -0.69
PDLIM3-205ENST00000504355 AMTP48728 403 aa10.76□□□□□ -0.69
PDLIM3-205ENST00000504355 LINC01620Q4KN68 170 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms