RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 SMIM12Q96EX1 92 aa14.24□□□□□ -0.13
RNF4-205ENST00000504224 C9JQL5 133 aa14.23□□□□□ -0.13
RNF4-205ENST00000504224 SRP19P09132 144 aaKnown RBP14.23□□□□□ -0.13
RNF4-205ENST00000504224 LINC00694P0DN24 101 aa14.23□□□□□ -0.13
RNF4-205ENST00000504224 ZNF56Q15929 161 aa14.23□□□□□ -0.13
RNF4-205ENST00000504224 A0A087WWC5 75 aa14.22□□□□□ -0.13
RNF4-205ENST00000504224 PLA2G1BP04054 148 aaKnown RBP14.22□□□□□ -0.13
RNF4-205ENST00000504224 OR5AL1P0C617 328 aa14.22□□□□□ -0.13
RNF4-205ENST00000504224 BAALCQ8WXS3 180 aa14.22□□□□□ -0.13
RNF4-205ENST00000504224 BIN3Q9NQY0 253 aa14.22□□□□□ -0.13
RNF4-205ENST00000504224 Q9UF83 564 aa14.22□□□□□ -0.13
RNF4-205ENST00000504224 SNAI2O43623 268 aa14.21□□□□□ -0.13
RNF4-205ENST00000504224 RPS20P60866 119 aaKnown RBP14.21□□□□□ -0.13
RNF4-205ENST00000504224 COMMD7Q86VX2 200 aa14.21□□□□□ -0.13
RNF4-205ENST00000504224 URGCP-MRPS24S4R325 110 aa14.21□□□□□ -0.13
RNF4-205ENST00000504224 TRBV10-1A0A0K0K1A3 114 aa14.2□□□□□ -0.14
RNF4-205ENST00000504224 RPL36AP83881 106 aaKnown RBP14.2□□□□□ -0.14
RNF4-205ENST00000504224 LINC00528Q8N1L1 170 aa14.2□□□□□ -0.14
RNF4-205ENST00000504224 OR2D3Q8NGH3 330 aa14.2□□□□□ -0.14
RNF4-205ENST00000504224 RPL36ALQ969Q0 106 aaKnown RBP14.2□□□□□ -0.14
RNF4-205ENST00000504224 TPPP3Q9BW30 176 aa14.2□□□□□ -0.14
RNF4-205ENST00000504224 MUC21A0A0G2JKD1 596 aa14.19□□□□□ -0.14
RNF4-205ENST00000504224 MUC21A0A140T8X8 626 aa14.19□□□□□ -0.14
RNF4-205ENST00000504224 XKRY2A2RUG3 117 aa14.19□□□□□ -0.14
RNF4-205ENST00000504224 P01737 135 aa14.19□□□□□ -0.14
RNF4-205ENST00000504224 SMIM17P0DL12 118 aa14.19□□□□□ -0.14
RNF4-205ENST00000504224 LINC01620Q4KN68 170 aa14.19□□□□□ -0.14
RNF4-205ENST00000504224 UQCC3Q6UW78 93 aa14.19□□□□□ -0.14
RNF4-205ENST00000504224 Q6ZSA8 131 aa14.19□□□□□ -0.14
RNF4-205ENST00000504224 AP1S3Q96PC3 154 aa14.19□□□□□ -0.14
RNF4-205ENST00000504224 SSBP4Q9BWG4 385 aaPredicted RBP14.19□□□□□ -0.14
RNF4-205ENST00000504224 DNAH8Q96JB1 4490 aa14.19□□□□□ -0.14
RNF4-205ENST00000504224 RAB4BP61018 213 aa14.18□□□□□ -0.14
RNF4-205ENST00000504224 SSTP61278 116 aa14.18□□□□□ -0.14
RNF4-205ENST00000504224 RMI2Q96E14 147 aa14.18□□□□□ -0.14
RNF4-205ENST00000504224 COX11Q9Y6N1 276 aa14.18□□□□□ -0.14
RNF4-205ENST00000504224 IGKV2D-24A0A075B6R9 120 aa14.17□□□□□ -0.14
RNF4-205ENST00000504224 IGLV2-8P01709 118 aa14.17□□□□□ -0.14
RNF4-205ENST00000504224 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.17□□□□□ -0.14
RNF4-205ENST00000504224 FER1L6-AS1Q8NA97 138 aa14.17□□□□□ -0.14
RNF4-205ENST00000504224 F5H697 171 aa14.16□□□□□ -0.14
RNF4-205ENST00000504224 TRBV20OR9-2A0A075B6H5 130 aa14.15□□□□□ -0.14
RNF4-205ENST00000504224 TRBV7-3A0A075B6L6 115 aa14.15□□□□□ -0.14
RNF4-205ENST00000504224 C19orf71A6NCJ1 209 aa14.15□□□□□ -0.14
RNF4-205ENST00000504224 GZMBP10144 247 aa14.15□□□□□ -0.14
RNF4-205ENST00000504224 CEBPGP53567 150 aa14.15□□□□□ -0.14
RNF4-205ENST00000504224 DNAJC30Q96LL9 226 aa14.15□□□□□ -0.14
RNF4-205ENST00000504224 KLK12Q9UKR0 248 aa14.15□□□□□ -0.14
RNF4-205ENST00000504224 KCNIP4Q6PIL6 250 aa14.14□□□□□ -0.15
RNF4-205ENST00000504224 NIT1Q86X76 327 aa14.14□□□□□ -0.15
RNF4-205ENST00000504224 Q8N976 141 aa14.14□□□□□ -0.15
RNF4-205ENST00000504224 UBE2D3P61077 147 aa14.13□□□□□ -0.15
RNF4-205ENST00000504224 UBE2D2P62837 147 aa14.13□□□□□ -0.15
RNF4-205ENST00000504224 CACNG7P62955 275 aa14.13□□□□□ -0.15
RNF4-205ENST00000504224 FAM74A3Q4VXF1 159 aa14.13□□□□□ -0.15
RNF4-205ENST00000504224 DEFB104AQ8WTQ1 72 aa14.13□□□□□ -0.15
RNF4-205ENST00000504224 UBE2WQ96B02 151 aa14.13□□□□□ -0.15
RNF4-205ENST00000504224 A0A087WX48 190 aa14.12□□□□□ -0.15
RNF4-205ENST00000504224 IGLC6P0CF74 106 aa14.12□□□□□ -0.15
RNF4-205ENST00000504224 SCXQ7RTU7 201 aa14.12□□□□□ -0.15
RNF4-205ENST00000504224 OR10G8Q8NGN5 311 aa14.12□□□□□ -0.15
RNF4-205ENST00000504224 SMIM7Q9BQ49 75 aa14.12□□□□□ -0.15
RNF4-205ENST00000504224 ZNF727A8MUV8 499 aa14.11□□□□□ -0.15
RNF4-205ENST00000504224 F2Z2F3 143 aa14.11□□□□□ -0.15
RNF4-205ENST00000504224 MGPP08493 103 aa14.11□□□□□ -0.15
RNF4-205ENST00000504224 TMEM218A2RU14 115 aa14.1□□□□□ -0.15
RNF4-205ENST00000504224 ELOBQ15370 118 aa14.1□□□□□ -0.15
RNF4-205ENST00000504224 NDUFA5Q16718 116 aa14.1□□□□□ -0.15
RNF4-205ENST00000504224 NEXN-AS1Q8NBZ9 246 aa14.1□□□□□ -0.15
RNF4-205ENST00000504224 KRTAP29-1A8MX34 341 aaPredicted RBP14.09□□□□□ -0.15
RNF4-205ENST00000504224 TRGC1P0CF51 173 aa14.09□□□□□ -0.15
RNF4-205ENST00000504224 RPP21Q9H633 154 aaKnown RBP14.09□□□□□ -0.15
RNF4-205ENST00000504224 H7C1H1 209 aa14.08□□□□□ -0.16
RNF4-205ENST00000504224 NUDT10Q8NFP7 164 aa14.08□□□□□ -0.16
RNF4-205ENST00000504224 OCC1Q8TAD7 63 aa14.08□□□□□ -0.16
RNF4-205ENST00000504224 NUDT11Q96G61 164 aa14.08□□□□□ -0.16
RNF4-205ENST00000504224 CHCHD7Q9BUK0 85 aa14.08□□□□□ -0.16
RNF4-205ENST00000504224 TMEM262E9PQX1 116 aa14.07□□□□□ -0.16
RNF4-205ENST00000504224 LYZL1Q6UWQ5 148 aa14.07□□□□□ -0.16
RNF4-205ENST00000504224 SLC7A5P1Q8MH63 180 aa14.07□□□□□ -0.16
RNF4-205ENST00000504224 CHAC1Q9BUX1 264 aa14.07□□□□□ -0.16
RNF4-205ENST00000504224 KIF25-AS1Q9Y6Z4 181 aa14.07□□□□□ -0.16
RNF4-205ENST00000504224 TRBV6-8A0A0A6YYG3 113 aa14.06□□□□□ -0.16
RNF4-205ENST00000504224 K7EN84 100 aa14.06□□□□□ -0.16
RNF4-205ENST00000504224 ADCYAP1P18509 176 aa14.06□□□□□ -0.16
RNF4-205ENST00000504224 TMEM241Q24JQ0 296 aa14.06□□□□□ -0.16
RNF4-205ENST00000504224 TMEM97Q5BJF2 176 aa14.06□□□□□ -0.16
RNF4-205ENST00000504224 RNASE7Q9H1E1 156 aaKnown RBP14.06□□□□□ -0.16
RNF4-205ENST00000504224 NAT8Q9UHE5 227 aa14.06□□□□□ -0.16
RNF4-205ENST00000504224 CTRLP40313 264 aa14.05□□□□□ -0.16
RNF4-205ENST00000504224 LINC01551Q86U37 167 aa14.05□□□□□ -0.16
RNF4-205ENST00000504224 SEC11CQ9BY50 192 aa14.05□□□□□ -0.16
RNF4-205ENST00000504224 PKIAP61925 76 aa14.04□□□□□ -0.16
RNF4-205ENST00000504224 Q0VG73 95 aa14.04□□□□□ -0.16
RNF4-205ENST00000504224 C1orf43Q9BWL3 253 aa14.04□□□□□ -0.16
RNF4-205ENST00000504224 DPH3P1Q9H4G8 78 aa14.04□□□□□ -0.16
RNF4-205ENST00000504224 F8W036 122 aa14.03□□□□□ -0.16
RNF4-205ENST00000504224 CRPP02741 224 aa14.03□□□□□ -0.16
RNF4-205ENST00000504224 NTF3P20783 257 aa14.03□□□□□ -0.16
RNF4-205ENST00000504224 RPL23P62829 140 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms