RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 PSMB8P28062 276 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 RNF7Q9UBF6 113 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 LOC389332A0A1B0GUA5 103 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 PDE6GP18545 87 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 GRNP28799 593 aaKnown RBP2.12□□□□□ -2.07
NEDD4-204ENST00000503468 SFTA2Q6UW10 78 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 ASCL5Q7RTU5 278 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 ABCA13Q86UQ4 5058 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 TRGV5A0A0B4J1U4 118 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 C17orf100A8MU93 164 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 H3BQ85 93 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 PATE4P0C8F1 98 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 C6orf226Q5I0X4 101 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 Q6JHZ5 121 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 SERP1Q9Y6X1 66 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 DNAH8Q96JB1 4490 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 A0A0G2JNJ9 132 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 WI2-2373I1.2A0A1W2PRP0 233 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 LYRM9A8MSI8 78 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 LYZP61626 148 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 ALKBH6Q3KRA9 238 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 C5orf38Q86SI9 138 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 Q9UFV3 132 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 SPENQ96T58 3664 aaKnown RBP2.12□□□□□ -2.07
NEDD4-204ENST00000503468 TGP01266 2768 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 TMSB15BA0A087X1C1 80 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 CCL3P10147 92 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 MAGEA5P43359 124 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 ZFP2Q6ZN57 461 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 ZNF837Q96EG3 531 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-204ENST00000503468 ZC2HC1AQ96GY0 325 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 CCDC140Q96MF4 163 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 LOC107984640A0A0U1RRK4 108 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 ZNF503-AS2A6NEH8 195 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 SOCS3O14543 225 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 SAA2P0DJI9 122 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-204ENST00000503468 COX6B1P14854 86 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 SPINK9Q5DT21 86 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 NEXN-AS1Q8NBZ9 246 aa2.12□□□□□ -2.07
NEDD4-204ENST00000503468 KLF14Q8TD94 323 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-204ENST00000503468 TRAV21A0A0B4J279 112 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 TRBV6-5A0A0K0K1A5 114 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 JMJD7-PLA2G4BH0Y9G9 81 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 H3BRN7 92 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 IGKV1-17P01599 117 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 WT1-ASQ06250 92 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 AGPAT4-IT1Q9H0P7 198 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 SH2D1AO60880 128 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 IGHV1-69P01742 117 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 ZNF833PQ6ZTB9 187 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 TRPT1Q86TN4 253 aaKnown RBP2.11□□□□□ -2.07
NEDD4-204ENST00000503468 TOMM6Q96B49 74 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 LINC00477Q96M19 166 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 MCRIP2Q9BUT9 160 aaKnown RBP2.11□□□□□ -2.07
NEDD4-204ENST00000503468 MOB4Q9Y3A3 225 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 COX7A2LO14548 114 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 IGLV1-40P01703 118 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 PFN2P35080 140 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 ZNF80P51504 273 aaPredicted RBP2.11□□□□□ -2.07
NEDD4-204ENST00000503468 C16orf47Q6ZP98 133 aaPredicted RBP2.11□□□□□ -2.07
NEDD4-204ENST00000503468 CCDC168Q8NDH2 2452 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 CMYA5Q8N3K9 4069 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 IGKV1D-37A0A075B6S9 117 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 A0A1W2PPR1 153 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 RS1O15537 224 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 ZNF826PQ6ZT77 177 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 TIMM21Q9BVV7 248 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 SELENOKQ9Y6D0 94 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 DYNC1H1Q14204 4646 aaKnown RBP2.11□□□□□ -2.07
NEDD4-204ENST00000503468 IGHV3-43A0A0B4J1X8 118 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 USP17L23D6RBM5 183 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 IGHV3-30P01768 117 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 IGHV3-30-5P0DP03 117 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 IGHV3-43DP0DP04 118 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 SEC61GP60059 68 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 RPL39P5Q59GN2 51 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 Q6ZQT7 251 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 ACANP16112 2415 aa2.11□□□□□ -2.07
NEDD4-204ENST00000503468 IGHV3-20A0A0C4DH32 117 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 FAM236DA0A1B0GTK5 79 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 ZNF561-AS1K7EIQ3 104 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 IGLV2-11P01706 119 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 SLPIP03973 132 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 FAM236CP0DP71 79 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 LOXL1Q08397 574 aaPredicted RBP2.1□□□□□ -2.07
NEDD4-204ENST00000503468 TMEM61Q8N0U2 210 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 BAALCQ8WXS3 180 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 DPH3Q96FX2 82 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 TTTY13Q9BZ97 58 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 CSPG4Q6UVK1 2322 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 IGLV2-18A0A075B6J9 118 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 A0A096LPE4 126 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 A0A1W2PPZ6 126 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 ELANEP08246 267 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 ERCC8Q13216 396 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 DIAPH2-AS1Q14236 149 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 MAPKAPK5-AS1Q8N8E1 139 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 SRXN1Q9BYN0 137 aa2.1□□□□□ -2.07
NEDD4-204ENST00000503468 UBL5Q9BZL1 73 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 338.6 ms