RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 COMMD7Q86VX2 200 aa12.07□□□□□ -0.48
SMAD1-204ENST00000503324 TMEM218A2RU14 115 aa12.06□□□□□ -0.48
SMAD1-204ENST00000503324 LINC00862A6NCI5 91 aa12.06□□□□□ -0.48
SMAD1-204ENST00000503324 BORCS7Q96B45 105 aa12.06□□□□□ -0.48
SMAD1-204ENST00000503324 NAT8BQ9UHF3 227 aa12.06□□□□□ -0.48
SMAD1-204ENST00000503324 TRAV8-6A0A0B4J262 113 aa12.05□□□□□ -0.48
SMAD1-204ENST00000503324 OR10J3Q5JRS4 329 aa12.05□□□□□ -0.48
SMAD1-204ENST00000503324 C1orf134Q5TEV5 83 aa12.05□□□□□ -0.48
SMAD1-204ENST00000503324 A0A087WWC5 75 aa12.04□□□□□ -0.48
SMAD1-204ENST00000503324 IGHV3-38A0A0C4DH36 116 aa12.04□□□□□ -0.48
SMAD1-204ENST00000503324 H7C1H1 209 aa12.04□□□□□ -0.48
SMAD1-204ENST00000503324 RASL11AQ6T310 242 aa12.04□□□□□ -0.48
SMAD1-204ENST00000503324 SMIM15Q7Z3B0 74 aa12.04□□□□□ -0.48
SMAD1-204ENST00000503324 C6orf223Q8N319 242 aa12.04□□□□□ -0.48
SMAD1-204ENST00000503324 TRAV26-2A0A0B4J265 109 aa12.03□□□□□ -0.48
SMAD1-204ENST00000503324 LINC01556Q5JQF7 62 aa12.03□□□□□ -0.48
SMAD1-204ENST00000503324 GATD1Q8NB37 220 aa12.03□□□□□ -0.48
SMAD1-204ENST00000503324 DNAJC30Q96LL9 226 aa12.03□□□□□ -0.48
SMAD1-204ENST00000503324 TMEM191AQ9H0A3 160 aa12.03□□□□□ -0.48
SMAD1-204ENST00000503324 F8W036 122 aa12.02□□□□□ -0.49
SMAD1-204ENST00000503324 PPP1R2P9O14990 202 aa12.02□□□□□ -0.49
SMAD1-204ENST00000503324 RIGQ13278 110 aa12.02□□□□□ -0.49
SMAD1-204ENST00000503324 LINC00336Q6ZUF6 198 aa12.02□□□□□ -0.49
SMAD1-204ENST00000503324 DAZ4Q86SG3 579 aaKnown RBP12.01□□□□□ -0.49
SMAD1-204ENST00000503324 RNF185Q96GF1 192 aa12.01□□□□□ -0.49
SMAD1-204ENST00000503324 NIT2Q9NQR4 276 aa12.01□□□□□ -0.49
SMAD1-204ENST00000503324 DAZ3Q9NR90 486 aaKnown RBP12.01□□□□□ -0.49
SMAD1-204ENST00000503324 TNFRSF18Q9Y5U5 241 aa12.01□□□□□ -0.49
SMAD1-204ENST00000503324 K7EP13 123 aa12□□□□□ -0.49
SMAD1-204ENST00000503324 BTF3P20290 206 aaKnown RBP12□□□□□ -0.49
SMAD1-204ENST00000503324 NTM-AS1Q6ZSK4 140 aa12□□□□□ -0.49
SMAD1-204ENST00000503324 Q8N3U1 123 aa12□□□□□ -0.49
SMAD1-204ENST00000503324 FRZBQ92765 325 aa12□□□□□ -0.49
SMAD1-204ENST00000503324 ANAPC16Q96DE5 110 aa12□□□□□ -0.49
SMAD1-204ENST00000503324 SEC11CQ9BY50 192 aa12□□□□□ -0.49
SMAD1-204ENST00000503324 TRAV9-2A0A087WT02 112 aa11.99□□□□□ -0.49
SMAD1-204ENST00000503324 TRBV6-8A0A0A6YYG3 113 aa11.99□□□□□ -0.49
SMAD1-204ENST00000503324 MT-ND4LP03901 98 aa11.99□□□□□ -0.49
SMAD1-204ENST00000503324 RPL39LQ96EH5 51 aaKnown RBP11.99□□□□□ -0.49
SMAD1-204ENST00000503324 A0A1B0GXF2 115 aa11.98□□□□□ -0.49
SMAD1-204ENST00000503324 IGHV3-30P01768 117 aa11.98□□□□□ -0.49
SMAD1-204ENST00000503324 IGHV3-33P01772 117 aa11.98□□□□□ -0.49
SMAD1-204ENST00000503324 IGHV3-30-3P0DP02 117 aa11.98□□□□□ -0.49
SMAD1-204ENST00000503324 IGHV3-30-5P0DP03 117 aa11.98□□□□□ -0.49
SMAD1-204ENST00000503324 RAB4AP20338 218 aa11.98□□□□□ -0.49
SMAD1-204ENST00000503324 C10orf91Q5T1B1 145 aa11.98□□□□□ -0.49
SMAD1-204ENST00000503324 AMN1Q8IY45 258 aa11.98□□□□□ -0.49
SMAD1-204ENST00000503324 DNAH11Q96DT5 4516 aa11.97□□□□□ -0.49
SMAD1-204ENST00000503324 PRSS29PA6NIE9 313 aa11.97□□□□□ -0.49
SMAD1-204ENST00000503324 GAS8-AS1O95177 125 aa11.97□□□□□ -0.49
SMAD1-204ENST00000503324 Q6ZRN7 208 aaPredicted RBP11.97□□□□□ -0.49
SMAD1-204ENST00000503324 NIT1Q86X76 327 aa11.97□□□□□ -0.49
SMAD1-204ENST00000503324 C10orf126Q8N4M7 172 aa11.97□□□□□ -0.49
SMAD1-204ENST00000503324 A0A1B0GW15 77 aa11.96□□□□□ -0.49
SMAD1-204ENST00000503324 CAMPP49913 170 aa11.96□□□□□ -0.49
SMAD1-204ENST00000503324 TMEM97Q5BJF2 176 aa11.96□□□□□ -0.49
SMAD1-204ENST00000503324 MRPL54Q6P161 138 aaKnown RBP11.96□□□□□ -0.49
SMAD1-204ENST00000503324 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.96□□□□□ -0.49
SMAD1-204ENST00000503324 PKD1P98161 4303 aa11.96□□□□□ -0.5
SMAD1-204ENST00000503324 HECTD4Q9Y4D8 3996 aa11.95□□□□□ -0.5
SMAD1-204ENST00000503324 A0A1B0GVY2 172 aa11.95□□□□□ -0.5
SMAD1-204ENST00000503324 IBA57-AS1B1ANH7 110 aa11.95□□□□□ -0.5
SMAD1-204ENST00000503324 HBBP68871 147 aa11.95□□□□□ -0.5
SMAD1-204ENST00000503324 TNP2Q05952 138 aa11.95□□□□□ -0.5
SMAD1-204ENST00000503324 MRAP2Q96G30 205 aa11.95□□□□□ -0.5
SMAD1-204ENST00000503324 BIRC6Q9NR09 4857 aa11.94□□□□□ -0.5
SMAD1-204ENST00000503324 TRBV6-5A0A0K0K1A5 114 aa11.94□□□□□ -0.5
SMAD1-204ENST00000503324 RPS10P46783 165 aaKnown RBP11.94□□□□□ -0.5
SMAD1-204ENST00000503324 IQCJQ1A5X6 159 aa11.94□□□□□ -0.5
SMAD1-204ENST00000503324 FAM104BQ5XKR9 115 aa11.94□□□□□ -0.5
SMAD1-204ENST00000503324 CARHSP1Q9Y2V2 147 aaKnown RBP11.94□□□□□ -0.5
SMAD1-204ENST00000503324 ATP5L2Q7Z4Y8 100 aa11.93□□□□□ -0.5
SMAD1-204ENST00000503324 TRBV25-1A0A075B6N4 114 aa11.92□□□□□ -0.5
SMAD1-204ENST00000503324 SMKR1H3BMG3 65 aa11.92□□□□□ -0.5
SMAD1-204ENST00000503324 NCR2O95944 276 aa11.92□□□□□ -0.5
SMAD1-204ENST00000503324 MRPL51Q4U2R6 128 aaKnown RBP11.92□□□□□ -0.5
SMAD1-204ENST00000503324 DEFB104AQ8WTQ1 72 aa11.92□□□□□ -0.5
SMAD1-204ENST00000503324 CHCHD7Q9BUK0 85 aa11.92□□□□□ -0.5
SMAD1-204ENST00000503324 CTDSP1Q9GZU7 261 aa11.92□□□□□ -0.5
SMAD1-204ENST00000503324 IGHV1-24A0A0C4DH33 117 aa11.91□□□□□ -0.5
SMAD1-204ENST00000503324 SDHAF1A6NFY7 115 aa11.91□□□□□ -0.5
SMAD1-204ENST00000503324 S100A8P05109 93 aa11.91□□□□□ -0.5
SMAD1-204ENST00000503324 LAGE3Q14657 143 aa11.91□□□□□ -0.5
SMAD1-204ENST00000503324 KCNIP4Q6PIL6 250 aa11.91□□□□□ -0.5
SMAD1-204ENST00000503324 NFE4Q86UQ8 179 aa11.91□□□□□ -0.5
SMAD1-204ENST00000503324 NRACQ8N912 160 aa11.91□□□□□ -0.5
SMAD1-204ENST00000503324 IMMP2LQ96T52 175 aa11.91□□□□□ -0.5
SMAD1-204ENST00000503324 CHCHD5Q9BSY4 110 aa11.91□□□□□ -0.5
SMAD1-204ENST00000503324 DYNC1H1Q14204 4646 aaKnown RBP11.9□□□□□ -0.5
SMAD1-204ENST00000503324 COTL1Q14019 142 aa11.9□□□□□ -0.5
SMAD1-204ENST00000503324 MPV17L2Q567V2 206 aa11.9□□□□□ -0.5
SMAD1-204ENST00000503324 URGCP-MRPS24S4R325 110 aa11.9□□□□□ -0.5
SMAD1-204ENST00000503324 A0A087WX48 190 aa11.89□□□□□ -0.51
SMAD1-204ENST00000503324 TMEM262E9PQX1 116 aa11.89□□□□□ -0.51
SMAD1-204ENST00000503324 POLR2KP53803 58 aaKnown RBP11.89□□□□□ -0.51
SMAD1-204ENST00000503324 TMEM70Q9BUB7 260 aa11.89□□□□□ -0.51
SMAD1-204ENST00000503324 ST20Q9HBF5 79 aa11.89□□□□□ -0.51
SMAD1-204ENST00000503324 C7orf77A4D0Y5 90 aa11.88□□□□□ -0.51
SMAD1-204ENST00000503324 GAGE6Q13070 117 aa11.88□□□□□ -0.51
SMAD1-204ENST00000503324 ATRAIDQ6UW56 229 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms