RNA–Protein interactions for RNA: ENST00000498751.1

SYNE1-231, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 578 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-231ENST00000498751 C11orf44Q8N8P7 122 aa5.55□□□□□ -1.52
SYNE1-231ENST00000498751 TMEM263Q8WUH6 116 aaKnown RBP5.55□□□□□ -1.52
SYNE1-231ENST00000498751 RPL39LQ96EH5 51 aaKnown RBP5.55□□□□□ -1.52
SYNE1-231ENST00000498751 C18orf15Q96N68 181 aa5.55□□□□□ -1.52
SYNE1-231ENST00000498751 TIMM17AQ99595 171 aa5.55□□□□□ -1.52
SYNE1-231ENST00000498751 HHLA3Q9XRX5 114 aa5.55□□□□□ -1.52
SYNE1-231ENST00000498751 HIVEP2P31629 2446 aa5.55□□□□□ -1.52
SYNE1-231ENST00000498751 A0A087WX48 190 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 SDHAF1A6NFY7 115 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 IGIPA6NJ69 53 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 M0R143 59 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 SIVA1O15304 175 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 MGPP08493 103 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 COX8AP10176 69 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 C2orf66Q6UXQ4 117 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 LURAP1LQ8IV03 231 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 NEXN-AS1Q8NBZ9 246 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 TMEM141Q96I45 108 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 KIR2DL4Q99706 377 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 OVOL2Q9BRP0 275 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 MCRIP2Q9BUT9 160 aaKnown RBP5.54□□□□□ -1.52
SYNE1-231ENST00000498751 CSTL1Q9H114 145 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 JPT2Q9H910 190 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 CYSLTR1Q9Y271 337 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 GOLT1BQ9Y3E0 138 aa5.54□□□□□ -1.52
SYNE1-231ENST00000498751 F8VRH5 84 aa5.53□□□□□ -1.52
SYNE1-231ENST00000498751 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.53□□□□□ -1.52
SYNE1-231ENST00000498751 PF4P02776 101 aa5.53□□□□□ -1.52
SYNE1-231ENST00000498751 PAPPA-AS1Q5QFB9 102 aa5.53□□□□□ -1.52
SYNE1-231ENST00000498751 CFAP126Q5VTH2 177 aa5.53□□□□□ -1.52
SYNE1-231ENST00000498751 LINC01587Q99440 93 aa5.53□□□□□ -1.52
SYNE1-231ENST00000498751 SNHG12Q9BXW3 62 aa5.53□□□□□ -1.52
SYNE1-231ENST00000498751 PYGO1Q9Y3Y4 419 aa5.53□□□□□ -1.52
SYNE1-231ENST00000498751 TIMM8BQ9Y5J9 83 aaPredicted RBP5.53□□□□□ -1.52
SYNE1-231ENST00000498751 FASNP49327 2511 aaKnown RBP5.53□□□□□ -1.52
SYNE1-231ENST00000498751 MYO9AB2RTY4 2548 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 A0A087WWL8 130 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 TRBV10-1A0A0K0K1A3 114 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 PLAC8L1A1L4L8 177 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 I3L3M4 83 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 SPRY2O43597 315 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 NUDT3O95989 172 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 FGF6P10767 208 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 PLNP26678 52 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 MAJINQ3KP22 176 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 SLC25A34Q6PIV7 304 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 BOD1L2Q8IYS8 172 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 ATOH7Q8N100 152 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 LINC00612Q8N6U2 182 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 KIR2DL5BQ8NHK3 375 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 C16orf74Q96GX8 76 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 GCN1Q92616 2671 aaKnown RBP5.52□□□□□ -1.53
SYNE1-231ENST00000498751 OTOGQ6ZRI0 2925 aa5.52□□□□□ -1.53
SYNE1-231ENST00000498751 SONP18583 2426 aaKnown RBP5.52□□□□□ -1.53
SYNE1-231ENST00000498751 MAP1AP78559 2803 aaPredicted RBP5.52□□□□□ -1.53
SYNE1-231ENST00000498751 TRAV4A0A0B4J268 109 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 hDV102S1A0JD36 115 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 SMIM9A6NGZ8 99 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 DPM2O94777 84 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 IGKCP01834 107 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 P0DMU3 169 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 FAM231AP0DMU4 169 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 FAM231CP0DMU5 169 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 HNRNPA3P51991 378 aaKnown RBP5.51□□□□□ -1.53
SYNE1-231ENST00000498751 FXYD7P58549 80 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 ZNF56Q15929 161 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 Q6ZN92 141 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 C20orf203Q8NBC4 194 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 BAALCQ8WXS3 180 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 XCL2Q9UBD3 114 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 TLN2Q9Y4G6 2542 aa5.51□□□□□ -1.53
SYNE1-231ENST00000498751 F5H697 171 aa5.5□□□□□ -1.53
SYNE1-231ENST00000498751 TSHBP01222 138 aa5.5□□□□□ -1.53
SYNE1-231ENST00000498751 PRSS1P07477 247 aa5.5□□□□□ -1.53
SYNE1-231ENST00000498751 AZU1P20160 251 aa5.5□□□□□ -1.53
SYNE1-231ENST00000498751 ANKRD39Q53RE8 183 aa5.5□□□□□ -1.53
SYNE1-231ENST00000498751 FAM74A4Q5TZK3 123 aa5.5□□□□□ -1.53
SYNE1-231ENST00000498751 HIST2H2BDQ6DRA6 164 aa5.5□□□□□ -1.53
SYNE1-231ENST00000498751 SCGB3A1Q96QR1 104 aa5.5□□□□□ -1.53
SYNE1-231ENST00000498751 TIMM21Q9BVV7 248 aa5.5□□□□□ -1.53
SYNE1-231ENST00000498751 HIGD1BQ9P298 99 aa5.5□□□□□ -1.53
SYNE1-231ENST00000498751 DKK2Q9UBU2 259 aa5.5□□□□□ -1.53
SYNE1-231ENST00000498751 ACANP16112 2415 aa5.5□□□□□ -1.53
SYNE1-231ENST00000498751 AGRNO00468 2067 aa5.49□□□□□ -1.53
SYNE1-231ENST00000498751 TRBV6-4A0A1B0GX49 114 aa5.49□□□□□ -1.53
SYNE1-231ENST00000498751 PMVKQ15126 192 aa5.49□□□□□ -1.53
SYNE1-231ENST00000498751 C12orf54Q6X4T0 127 aa5.49□□□□□ -1.53
SYNE1-231ENST00000498751 GTSCR1Q86UQ5 136 aa5.49□□□□□ -1.53
SYNE1-231ENST00000498751 NFE4Q86UQ8 179 aa5.49□□□□□ -1.53
SYNE1-231ENST00000498751 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.49□□□□□ -1.53
SYNE1-231ENST00000498751 MRPL35Q9NZE8 188 aaKnown RBP5.49□□□□□ -1.53
SYNE1-231ENST00000498751 CSDC2Q9Y534 153 aaKnown RBP5.49□□□□□ -1.53
SYNE1-231ENST00000498751 CUBNO60494 3623 aa5.49□□□□□ -1.53
SYNE1-231ENST00000498751 H3BS24 57 aa5.48□□□□□ -1.53
SYNE1-231ENST00000498751 RRN3P1Q2M238 152 aa5.48□□□□□ -1.53
SYNE1-231ENST00000498751 C2orf91Q6ZV80 131 aa5.48□□□□□ -1.53
SYNE1-231ENST00000498751 AMELXQ99217 191 aa5.48□□□□□ -1.53
SYNE1-231ENST00000498751 TMEM208Q9BTX3 173 aa5.48□□□□□ -1.53
SYNE1-231ENST00000498751 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
SYNE1-231ENST00000498751 TP53TG1Q9Y2A0 90 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms