RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 ELOBQ15370 118 aa2.55□□□□□ -2
USP54-217ENST00000498213 ZNF726P1Q15940 193 aa2.55□□□□□ -2
USP54-217ENST00000498213 PET117Q6UWS5 81 aa2.55□□□□□ -2
USP54-217ENST00000498213 TMEM182Q6ZP80 229 aaPredicted RBP2.55□□□□□ -2
USP54-217ENST00000498213 Q6ZTI0 123 aa2.55□□□□□ -2
USP54-217ENST00000498213 COMMD7Q86VX2 200 aa2.55□□□□□ -2
USP54-217ENST00000498213 STX12Q86Y82 276 aa2.55□□□□□ -2
USP54-217ENST00000498213 RNF182Q8N6D2 247 aa2.55□□□□□ -2
USP54-217ENST00000498213 Q8N976 141 aa2.55□□□□□ -2
USP54-217ENST00000498213 PHYHIPLQ96FC7 376 aa2.55□□□□□ -2
USP54-217ENST00000498213 PRADC1Q9BSG0 188 aa2.55□□□□□ -2
USP54-217ENST00000498213 WDR61Q9GZS3 305 aaKnown RBP2.55□□□□□ -2
USP54-217ENST00000498213 SLC25A31Q9H0C2 315 aa2.55□□□□□ -2
USP54-217ENST00000498213 OR51M1Q9H341 326 aa2.55□□□□□ -2
USP54-217ENST00000498213 ZNF492Q9P255 531 aa2.55□□□□□ -2
USP54-217ENST00000498213 BORCS7-ASMTA0A0B4J1R7 106 aa2.54□□□□□ -2
USP54-217ENST00000498213 A0A0J9YY99 117 aa2.54□□□□□ -2
USP54-217ENST00000498213 SMCO3A2RU48 225 aa2.54□□□□□ -2
USP54-217ENST00000498213 C9JQL5 133 aa2.54□□□□□ -2
USP54-217ENST00000498213 IGLV2-8P01709 118 aa2.54□□□□□ -2
USP54-217ENST00000498213 FGF7P21781 194 aa2.54□□□□□ -2
USP54-217ENST00000498213 ZNF138P52744 262 aa2.54□□□□□ -2
USP54-217ENST00000498213 TAS2R45P59539 299 aa2.54□□□□□ -2
USP54-217ENST00000498213 RAB2AP61019 212 aa2.54□□□□□ -2
USP54-217ENST00000498213 CCL20P78556 96 aa2.54□□□□□ -2
USP54-217ENST00000498213 Q0VG73 95 aa2.54□□□□□ -2
USP54-217ENST00000498213 SRSF9Q13242 221 aaKnown RBP eCLIP2.54□□□□□ -2
USP54-217ENST00000498213 RHOHQ15669 191 aa2.54□□□□□ -2
USP54-217ENST00000498213 NDUFA5Q16718 116 aa2.54□□□□□ -2
USP54-217ENST00000498213 GCSAMLQ5JQS6 135 aa2.54□□□□□ -2
USP54-217ENST00000498213 FAM159AQ6UWV7 190 aa2.54□□□□□ -2
USP54-217ENST00000498213 PATE2Q6UY27 113 aa2.54□□□□□ -2
USP54-217ENST00000498213 ZFP2Q6ZN57 461 aa2.54□□□□□ -2
USP54-217ENST00000498213 OR2G3Q8NGZ4 309 aa2.54□□□□□ -2
USP54-217ENST00000498213 ATP6V0E2Q8NHE4 81 aa2.54□□□□□ -2
USP54-217ENST00000498213 MGST2Q99735 147 aa2.54□□□□□ -2
USP54-217ENST00000498213 PAXXQ9BUH6 204 aa2.54□□□□□ -2
USP54-217ENST00000498213 NPCDR1Q9BY65 106 aa2.54□□□□□ -2
USP54-217ENST00000498213 PARD6GQ9BYG4 376 aaPredicted RBP2.54□□□□□ -2
USP54-217ENST00000498213 UQCC1Q9NVA1 299 aa2.54□□□□□ -2
USP54-217ENST00000498213 TIMM9Q9Y5J7 89 aa2.54□□□□□ -2
USP54-217ENST00000498213 TRAV12-3A0A0B4J271 114 aa2.53□□□□□ -2
USP54-217ENST00000498213 TRAV21A0A0B4J279 112 aa2.53□□□□□ -2
USP54-217ENST00000498213 A0A1B0GV50 99 aa2.53□□□□□ -2
USP54-217ENST00000498213 C17orf112F2Z3M2 114 aa2.53□□□□□ -2
USP54-217ENST00000498213 ADCYAP1P18509 176 aa2.53□□□□□ -2
USP54-217ENST00000498213 S100A1P23297 94 aa2.53□□□□□ -2
USP54-217ENST00000498213 PPT1P50897 306 aa2.53□□□□□ -2
USP54-217ENST00000498213 DEFB1P60022 68 aa2.53□□□□□ -2
USP54-217ENST00000498213 KRTAP10-8P60410 259 aa2.53□□□□□ -2
USP54-217ENST00000498213 MIC13Q5XKP0 118 aa2.53□□□□□ -2
USP54-217ENST00000498213 ATRAIDQ6UW56 229 aa2.53□□□□□ -2
USP54-217ENST00000498213 Q6ZRU5 148 aa2.53□□□□□ -2
USP54-217ENST00000498213 ZFAND2AQ8N6M9 145 aa2.53□□□□□ -2
USP54-217ENST00000498213 OR4C5Q8NGB2 326 aa2.53□□□□□ -2
USP54-217ENST00000498213 LYPD6BQ8NI32 183 aa2.53□□□□□ -2
USP54-217ENST00000498213 FAM213BQ8TBF2 198 aa2.53□□□□□ -2
USP54-217ENST00000498213 PSMG3Q9BT73 122 aaPredicted RBP2.53□□□□□ -2
USP54-217ENST00000498213 CHAC1Q9BUX1 264 aa2.53□□□□□ -2
USP54-217ENST00000498213 GTSF1LQ9H1H1 148 aa2.53□□□□□ -2
USP54-217ENST00000498213 MED9Q9NWA0 146 aa2.53□□□□□ -2
USP54-217ENST00000498213 PKIGQ9Y2B9 76 aa2.53□□□□□ -2
USP54-217ENST00000498213 TRBV10-1A0A0K0K1A3 114 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 A8MWV9 139 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 GGTLC3B5MD39 225 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 H3BQ15 152 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 K7EQM0 130 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 NBEAP1P0C6P0 100 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 EIF5AP63241 154 aaKnown RBP2.52□□□□□ -2.01
USP54-217ENST00000498213 KHDC3LQ587J8 217 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 TMEM97Q5BJF2 176 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 KCNIP4Q6PIL6 250 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.52□□□□□ -2.01
USP54-217ENST00000498213 TYMSOSQ8TAI1 123 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 SCGB1C1Q8TD33 95 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 BLNKQ8WV28 456 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 RNF185Q96GF1 192 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 TCEAL7Q9BRU2 100 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 NDFIP1Q9BT67 221 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 OCR1Q9BZK8 76 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 AGPAT4-IT1Q9H0P7 198 aa2.52□□□□□ -2.01
USP54-217ENST00000498213 A0A087WZ39 114 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 MAP1LC3B2A6NCE7 125 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 SLC17A3O00476 420 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 KRTAP1-4P0C5Y4 121 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 OR10J4P0C629 311 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 GZMBP10144 247 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 RNASE4P34096 147 aaKnown RBP2.51□□□□□ -2.01
USP54-217ENST00000498213 RAB5CP51148 216 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 NDUFV3P56181 108 aaKnown RBP2.51□□□□□ -2.01
USP54-217ENST00000498213 RAB14P61106 215 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 SERF2P84101 59 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 SAPCD1Q5SSQ6 148 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 AKR1C8PQ5T2L2 129 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 EIF5AL1Q6IS14 154 aaKnown RBP2.51□□□□□ -2.01
USP54-217ENST00000498213 MIR17HGQ75NE6 70 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 SCXQ7RTU7 201 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 WFDC10BQ8IUB3 73 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 CMTM2Q8TAZ6 248 aa2.51□□□□□ -2.01
USP54-217ENST00000498213 MBD3L1Q8WWY6 194 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms