RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 RPL36AP83881 106 aaKnown RBP9.46□□□□□ -0.9
CPNE1-227ENST00000498056 MRPL51Q4U2R6 128 aaKnown RBP9.46□□□□□ -0.9
CPNE1-227ENST00000498056 NEXN-AS1Q8NBZ9 246 aa9.46□□□□□ -0.9
CPNE1-227ENST00000498056 RPL36ALQ969Q0 106 aaKnown RBP9.46□□□□□ -0.9
CPNE1-227ENST00000498056 RPL39LQ96EH5 51 aaKnown RBP9.46□□□□□ -0.9
CPNE1-227ENST00000498056 MRAP2Q96G30 205 aa9.46□□□□□ -0.9
CPNE1-227ENST00000498056 D6R8Y8 96 aa9.45□□□□□ -0.9
CPNE1-227ENST00000498056 M0QY20 66 aa9.45□□□□□ -0.9
CPNE1-227ENST00000498056 HLA-DQA1P01909 254 aa9.45□□□□□ -0.9
CPNE1-227ENST00000498056 MRPL23Q16540 153 aaKnown RBP9.45□□□□□ -0.9
CPNE1-227ENST00000498056 COX19Q49B96 90 aa9.45□□□□□ -0.9
CPNE1-227ENST00000498056 OR10J3Q5JRS4 329 aa9.45□□□□□ -0.9
CPNE1-227ENST00000498056 FRZBQ92765 325 aa9.45□□□□□ -0.9
CPNE1-227ENST00000498056 YPEL4Q96NS1 127 aa9.45□□□□□ -0.9
CPNE1-227ENST00000498056 Q9UF83 564 aa9.45□□□□□ -0.9
CPNE1-227ENST00000498056 PLECQ15149 4684 aaKnown RBP9.45□□□□□ -0.9
CPNE1-227ENST00000498056 GAS8-AS1O95177 125 aa9.44□□□□□ -0.9
CPNE1-227ENST00000498056 MT-ND6P03923 174 aa9.44□□□□□ -0.9
CPNE1-227ENST00000498056 CKS2P33552 79 aa9.44□□□□□ -0.9
CPNE1-227ENST00000498056 ZNRF2Q8NHG8 242 aa9.44□□□□□ -0.9
CPNE1-227ENST00000498056 APLNQ9ULZ1 77 aa9.44□□□□□ -0.9
CPNE1-227ENST00000498056 TNFRSF18Q9Y5U5 241 aa9.44□□□□□ -0.9
CPNE1-227ENST00000498056 APCSP02743 223 aa9.43□□□□□ -0.9
CPNE1-227ENST00000498056 LINC00694P0DN24 101 aa9.43□□□□□ -0.9
CPNE1-227ENST00000498056 RPS10P46783 165 aaKnown RBP9.43□□□□□ -0.9
CPNE1-227ENST00000498056 TCTAP57738 103 aa9.43□□□□□ -0.9
CPNE1-227ENST00000498056 NEGR1Q7Z3B1 354 aa9.43□□□□□ -0.9
CPNE1-227ENST00000498056 GNB1LQ9BYB4 327 aa9.43□□□□□ -0.9
CPNE1-227ENST00000498056 MRPL18Q9H0U6 180 aaKnown RBP9.43□□□□□ -0.9
CPNE1-227ENST00000498056 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
CPNE1-227ENST00000498056 IGHV3-38A0A0C4DH36 116 aa9.42□□□□□ -0.9
CPNE1-227ENST00000498056 UBE2DNLQ8IWF7 75 aa9.42□□□□□ -0.9
CPNE1-227ENST00000498056 ORMDL3Q8N138 153 aa9.42□□□□□ -0.9
CPNE1-227ENST00000498056 DNAJC30Q96LL9 226 aa9.42□□□□□ -0.9
CPNE1-227ENST00000498056 NIT2Q9NQR4 276 aa9.42□□□□□ -0.9
CPNE1-227ENST00000498056 ALMS1Q8TCU4 4167 aa9.41□□□□□ -0.9
CPNE1-227ENST00000498056 UBE2D3P61077 147 aa9.41□□□□□ -0.9
CPNE1-227ENST00000498056 UBE2D2P62837 147 aa9.41□□□□□ -0.9
CPNE1-227ENST00000498056 KIAA1644Q3SXP7 199 aa9.41□□□□□ -0.9
CPNE1-227ENST00000498056 ATP6V0E2Q8NHE4 81 aa9.41□□□□□ -0.9
CPNE1-227ENST00000498056 PRELID3AQ96N28 172 aa9.41□□□□□ -0.9
CPNE1-227ENST00000498056 TRAPPC1Q9Y5R8 145 aa9.41□□□□□ -0.9
CPNE1-227ENST00000498056 TENM2Q9NT68 2774 aa9.41□□□□□ -0.9
CPNE1-227ENST00000498056 NPYP01303 97 aa9.4□□□□□ -0.9
CPNE1-227ENST00000498056 PPBPP02775 128 aa9.4□□□□□ -0.9
CPNE1-227ENST00000498056 FABP9Q0Z7S8 132 aa9.4□□□□□ -0.9
CPNE1-227ENST00000498056 SH2D6Q7Z4S9 175 aa9.4□□□□□ -0.9
CPNE1-227ENST00000498056 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.4□□□□□ -0.9
CPNE1-227ENST00000498056 ST20Q9HBF5 79 aa9.4□□□□□ -0.9
CPNE1-227ENST00000498056 SDHAF1A6NFY7 115 aa9.39□□□□□ -0.91
CPNE1-227ENST00000498056 PPP1R17O96001 155 aa9.39□□□□□ -0.91
CPNE1-227ENST00000498056 NRACQ8N912 160 aa9.39□□□□□ -0.91
CPNE1-227ENST00000498056 TRBV6-5A0A0K0K1A5 114 aa9.38□□□□□ -0.91
CPNE1-227ENST00000498056 TNFRSF6BO95407 300 aa9.38□□□□□ -0.91
CPNE1-227ENST00000498056 CCL18P55774 89 aa9.38□□□□□ -0.91
CPNE1-227ENST00000498056 SUMO2P61956 95 aaKnown RBP9.38□□□□□ -0.91
CPNE1-227ENST00000498056 DAZ4Q86SG3 579 aaKnown RBP9.38□□□□□ -0.91
CPNE1-227ENST00000498056 DEFB104AQ8WTQ1 72 aa9.38□□□□□ -0.91
CPNE1-227ENST00000498056 DAZ3Q9NR90 486 aaKnown RBP9.38□□□□□ -0.91
CPNE1-227ENST00000498056 RAB5AP20339 215 aa9.37□□□□□ -0.91
CPNE1-227ENST00000498056 GTSF1LQ9H1H1 148 aa9.37□□□□□ -0.91
CPNE1-227ENST00000498056 MAP1LC3AQ9H492 121 aa9.37□□□□□ -0.91
CPNE1-227ENST00000498056 LAMTOR2Q9Y2Q5 125 aa9.37□□□□□ -0.91
CPNE1-227ENST00000498056 LYSTQ99698 3801 aa9.36□□□□□ -0.91
CPNE1-227ENST00000498056 COLCA2A8K830 154 aa9.36□□□□□ -0.91
CPNE1-227ENST00000498056 PHOX2AO14813 284 aa9.36□□□□□ -0.91
CPNE1-227ENST00000498056 COTL1Q14019 142 aa9.36□□□□□ -0.91
CPNE1-227ENST00000498056 ESRGQ1W209 222 aa9.36□□□□□ -0.91
CPNE1-227ENST00000498056 LYPD5Q6UWN5 251 aa9.36□□□□□ -0.91
CPNE1-227ENST00000498056 TMEM70Q9BUB7 260 aa9.36□□□□□ -0.91
CPNE1-227ENST00000498056 SMIM2Q9BVW6 85 aa9.36□□□□□ -0.91
CPNE1-227ENST00000498056 LOC389332A0A1B0GUA5 103 aa9.35□□□□□ -0.91
CPNE1-227ENST00000498056 PMCHP20382 165 aa9.35□□□□□ -0.91
CPNE1-227ENST00000498056 C20orf78Q9BR46 151 aa9.35□□□□□ -0.91
CPNE1-227ENST00000498056 MRPS16Q9Y3D3 137 aaKnown RBP9.35□□□□□ -0.91
CPNE1-227ENST00000498056 LINC00588Q9Y4M8 146 aa9.35□□□□□ -0.91
CPNE1-227ENST00000498056 TRBV25-1A0A075B6N4 114 aa9.34□□□□□ -0.91
CPNE1-227ENST00000498056 LY6G6CO95867 125 aa9.34□□□□□ -0.91
CPNE1-227ENST00000498056 AMTP48728 403 aa9.34□□□□□ -0.91
CPNE1-227ENST00000498056 LELP1Q5T871 98 aa9.34□□□□□ -0.91
CPNE1-227ENST00000498056 LINC00476Q8WZB0 136 aa9.34□□□□□ -0.91
CPNE1-227ENST00000498056 ALKBH7Q9BT30 221 aaPredicted RBP9.34□□□□□ -0.91
CPNE1-227ENST00000498056 TRBV6-8A0A0A6YYG3 113 aa9.33□□□□□ -0.92
CPNE1-227ENST00000498056 TRBV27A0A0K0K1C4 114 aa9.33□□□□□ -0.92
CPNE1-227ENST00000498056 I3L3M4 83 aa9.33□□□□□ -0.92
CPNE1-227ENST00000498056 TRGC2P03986 189 aa9.33□□□□□ -0.92
CPNE1-227ENST00000498056 FCER1GP30273 86 aa9.33□□□□□ -0.92
CPNE1-227ENST00000498056 TIRAPP58753 221 aa9.33□□□□□ -0.92
CPNE1-227ENST00000498056 TMEM97Q5BJF2 176 aa9.33□□□□□ -0.92
CPNE1-227ENST00000498056 WFDC10BQ8IUB3 73 aa9.33□□□□□ -0.92
CPNE1-227ENST00000498056 KIR2DL4Q99706 377 aa9.33□□□□□ -0.92
CPNE1-227ENST00000498056 DNAH1Q9P2D7 4330 aa9.32□□□□□ -0.92
CPNE1-227ENST00000498056 VPS13DQ5THJ4 4388 aa9.32□□□□□ -0.92
CPNE1-227ENST00000498056 TRAV8-6A0A0B4J262 113 aa9.32□□□□□ -0.92
CPNE1-227ENST00000498056 IGHV1-24A0A0C4DH33 117 aa9.32□□□□□ -0.92
CPNE1-227ENST00000498056 VCYO14598 125 aa9.32□□□□□ -0.92
CPNE1-227ENST00000498056 TSHBP01222 138 aa9.32□□□□□ -0.92
CPNE1-227ENST00000498056 POLR2KP53803 58 aaKnown RBP9.32□□□□□ -0.92
CPNE1-227ENST00000498056 IQCJQ1A5X6 159 aa9.32□□□□□ -0.92
CPNE1-227ENST00000498056 LGALS9CQ6DKI2 356 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms