RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
SSBP1-213ENST00000496622 CENPWQ5EE01 88 aa4.69□□□□□ -1.66
SSBP1-213ENST00000496622 TMEM70Q9BUB7 260 aa4.69□□□□□ -1.66
SSBP1-213ENST00000496622 A8MWL6 223 aa4.68□□□□□ -1.66
SSBP1-213ENST00000496622 GP9P14770 177 aa4.68□□□□□ -1.66
SSBP1-213ENST00000496622 ZNF414Q96IQ9 312 aa4.68□□□□□ -1.66
SSBP1-213ENST00000496622 IGKV3-7A0A075B6H7 116 aa4.68□□□□□ -1.66
SSBP1-213ENST00000496622 K7ERJ3 54 aa4.68□□□□□ -1.66
SSBP1-213ENST00000496622 SLC25A16P16260 332 aa4.68□□□□□ -1.66
SSBP1-213ENST00000496622 HLA-DMBP28068 263 aa4.68□□□□□ -1.66
SSBP1-213ENST00000496622 BRK1Q8WUW1 75 aa4.68□□□□□ -1.66
SSBP1-213ENST00000496622 SMR3AQ99954 134 aa4.68□□□□□ -1.66
SSBP1-213ENST00000496622 TMEM167BQ9NRX6 74 aa4.68□□□□□ -1.66
SSBP1-213ENST00000496622 HHLA3Q9XRX5 114 aa4.68□□□□□ -1.66
SSBP1-213ENST00000496622 MOB4Q9Y3A3 225 aa4.68□□□□□ -1.66
SSBP1-213ENST00000496622 PCLOQ9Y6V0 5065 aa4.67□□□□□ -1.66
SSBP1-213ENST00000496622 TRAV41A0A0B4J266 112 aa4.67□□□□□ -1.66
SSBP1-213ENST00000496622 DPM2O94777 84 aa4.67□□□□□ -1.66
SSBP1-213ENST00000496622 IGF1P05019 195 aa4.67□□□□□ -1.66
SSBP1-213ENST00000496622 ASIPP42127 132 aa4.67□□□□□ -1.66
SSBP1-213ENST00000496622 LINC00322Q6ZN03 302 aaPredicted RBP4.67□□□□□ -1.66
SSBP1-213ENST00000496622 ZNF493Q6ZR52 646 aa4.67□□□□□ -1.66
SSBP1-213ENST00000496622 PCP2Q8IVA1 136 aa4.67□□□□□ -1.66
SSBP1-213ENST00000496622 HOXA3O43365 443 aaPredicted RBP4.67□□□□□ -1.66
SSBP1-213ENST00000496622 TRGV3P03979 118 aa4.67□□□□□ -1.66
SSBP1-213ENST00000496622 CD7P09564 240 aa4.67□□□□□ -1.66
SSBP1-213ENST00000496622 CFAP126Q5VTH2 177 aa4.67□□□□□ -1.66
SSBP1-213ENST00000496622 UNQ9165/PRO28630Q6UXU0 137 aa4.67□□□□□ -1.66
SSBP1-213ENST00000496622 Q9H3A6 140 aa4.67□□□□□ -1.66
SSBP1-213ENST00000496622 RYR3Q15413 4870 aa4.67□□□□□ -1.66
SSBP1-213ENST00000496622 COL6A5A8TX70 2615 aa4.67□□□□□ -1.66
SSBP1-213ENST00000496622 A0A087WWL8 130 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 A6NDX4 124 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 SNURFLB1AK76 121 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 IGLL5B9A064 214 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 BMPR1BO00238 502 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 IGLV2-8P01709 118 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 HILS1P60008 231 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 DEFB1P60022 68 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 LCE1DQ5T752 114 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 GTSCR1Q86UQ5 136 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 ANKRD29Q8N6D5 301 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 PHLDA1Q8WV24 401 aaPredicted RBP4.66□□□□□ -1.66
SSBP1-213ENST00000496622 CR1P17927 2039 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 TRAV13-1A0A0B4J241 112 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 PEX7O00628 323 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 MYCNOSP40205 109 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 RPL13AP40429 203 aaKnown RBP4.66□□□□□ -1.66
SSBP1-213ENST00000496622 DSCR9P59020 149 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 TEN1Q86WV5 123 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 RNF182Q8N6D2 247 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 UBE2E2Q96LR5 201 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 SHANK2-AS3Q9BTD1 123 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 VWFP04275 2813 aa4.66□□□□□ -1.66
SSBP1-213ENST00000496622 WI2-2373I1.2A0A1W2PRP0 233 aa4.65□□□□□ -1.66
SSBP1-213ENST00000496622 CLPSL1A2RUU4 121 aa4.65□□□□□ -1.66
SSBP1-213ENST00000496622 CRXO43186 299 aaPredicted RBP4.65□□□□□ -1.66
SSBP1-213ENST00000496622 TMEM258P61165 79 aa4.65□□□□□ -1.66
SSBP1-213ENST00000496622 LOXL1Q08397 574 aaPredicted RBP4.65□□□□□ -1.66
SSBP1-213ENST00000496622 C15orf53Q8NAA6 179 aa4.65□□□□□ -1.66
SSBP1-213ENST00000496622 C11orf52Q96A22 123 aa4.65□□□□□ -1.66
SSBP1-213ENST00000496622 C16orf92Q96LL3 132 aa4.65□□□□□ -1.66
SSBP1-213ENST00000496622 OTORQ9NRC9 128 aa4.65□□□□□ -1.66
SSBP1-213ENST00000496622 EPDR1Q9UM22 224 aa4.65□□□□□ -1.66
SSBP1-213ENST00000496622 SMAD5-AS1Q9Y6J3 95 aa4.65□□□□□ -1.66
SSBP1-213ENST00000496622 TRBV19A0A075B6N1 114 aa4.65□□□□□ -1.67
SSBP1-213ENST00000496622 H3BRN7 92 aa4.65□□□□□ -1.67
SSBP1-213ENST00000496622 MRPS12O15235 138 aaKnown RBP4.65□□□□□ -1.67
SSBP1-213ENST00000496622 NDUFC2O95298 119 aa4.65□□□□□ -1.67
SSBP1-213ENST00000496622 TRACP01848 142 aa4.65□□□□□ -1.67
SSBP1-213ENST00000496622 IGHG2P01859 326 aa4.65□□□□□ -1.67
SSBP1-213ENST00000496622 IGF2BP2-AS1Q96M15 143 aa4.65□□□□□ -1.67
SSBP1-213ENST00000496622 FOXC2Q99958 501 aa4.65□□□□□ -1.67
SSBP1-213ENST00000496622 TENM1Q9UKZ4 2725 aa4.65□□□□□ -1.67
SSBP1-213ENST00000496622 ANK3Q12955 4377 aaKnown RBP4.64□□□□□ -1.67
SSBP1-213ENST00000496622 IGKV2-40A0A087WW87 121 aaPredicted RBP4.64□□□□□ -1.67
SSBP1-213ENST00000496622 IGKV2D-40P01614 121 aaPredicted RBP4.64□□□□□ -1.67
SSBP1-213ENST00000496622 APCSP02743 223 aa4.64□□□□□ -1.67
SSBP1-213ENST00000496622 TCRAP04437 139 aa4.64□□□□□ -1.67
SSBP1-213ENST00000496622 CRYGAP11844 174 aa4.64□□□□□ -1.67
SSBP1-213ENST00000496622 FXYD2P54710 66 aa4.64□□□□□ -1.67
SSBP1-213ENST00000496622 PRNTQ86SH4 94 aa4.64□□□□□ -1.67
SSBP1-213ENST00000496622 CEND1Q8N111 149 aa4.64□□□□□ -1.67
SSBP1-213ENST00000496622 Q8TAT8 98 aa4.64□□□□□ -1.67
SSBP1-213ENST00000496622 KRTAP10-2P60368 255 aa4.64□□□□□ -1.67
SSBP1-213ENST00000496622 C19orf54Q5BKX5 351 aa4.64□□□□□ -1.67
SSBP1-213ENST00000496622 C18orf65Q6ZTR6 163 aa4.64□□□□□ -1.67
SSBP1-213ENST00000496622 TMEM158Q8WZ71 300 aa4.64□□□□□ -1.67
SSBP1-213ENST00000496622 PRSS22Q9GZN4 317 aa4.64□□□□□ -1.67
SSBP1-213ENST00000496622 V9GYV3 84 aa4.64□□□□□ -1.67
SSBP1-213ENST00000496622 TRAV8-2A0A0B4J237 113 aa4.63□□□□□ -1.67
SSBP1-213ENST00000496622 hADV29S1A0JD25 119 aa4.63□□□□□ -1.67
SSBP1-213ENST00000496622 PRAC2D3DTV9 90 aa4.63□□□□□ -1.67
SSBP1-213ENST00000496622 CCL24O00175 119 aa4.63□□□□□ -1.67
SSBP1-213ENST00000496622 BUB3O43684 328 aa4.63□□□□□ -1.67
SSBP1-213ENST00000496622 IGLV2-11P01706 119 aa4.63□□□□□ -1.67
SSBP1-213ENST00000496622 DEFB136Q30KP8 78 aa4.63□□□□□ -1.67
SSBP1-213ENST00000496622 MRPL55Q7Z7F7 128 aaKnown RBP4.63□□□□□ -1.67
SSBP1-213ENST00000496622 TXNDC17Q9BRA2 123 aa4.63□□□□□ -1.67
SSBP1-213ENST00000496622 NSD1Q96L73 2696 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms