RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 DAZ4Q86SG3 579 aaKnown RBP6.2□□□□□ -1.42
U2AF1-212ENST00000496462 C10orf126Q8N4M7 172 aa6.2□□□□□ -1.42
U2AF1-212ENST00000496462 DAZ3Q9NR90 486 aaKnown RBP6.2□□□□□ -1.42
U2AF1-212ENST00000496462 C1orf196B1AJZ1 125 aa6.19□□□□□ -1.42
U2AF1-212ENST00000496462 V9GYV3 84 aa6.19□□□□□ -1.42
U2AF1-212ENST00000496462 H3BNG1 76 aa6.18□□□□□ -1.42
U2AF1-212ENST00000496462 K7EN84 100 aa6.18□□□□□ -1.42
U2AF1-212ENST00000496462 SMIM27A0A1W2PRY6 76 aa6.18□□□□□ -1.42
U2AF1-212ENST00000496462 C12orf74Q32Q52 190 aa6.18□□□□□ -1.42
U2AF1-212ENST00000496462 RNASEKQ6P5S7 137 aaKnown RBP6.18□□□□□ -1.42
U2AF1-212ENST00000496462 TMEM88Q6PEY1 159 aa6.18□□□□□ -1.42
U2AF1-212ENST00000496462 IGLV2-8P01709 118 aa6.18□□□□□ -1.42
U2AF1-212ENST00000496462 IGLC6P0CF74 106 aa6.18□□□□□ -1.42
U2AF1-212ENST00000496462 LINC00518Q8N0U6 118 aa6.18□□□□□ -1.42
U2AF1-212ENST00000496462 NXT2Q9NPJ8 142 aaKnown RBP6.18□□□□□ -1.42
U2AF1-212ENST00000496462 TRBV7-3A0A075B6L6 115 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 IGHV1-24A0A0C4DH33 117 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 PSCAO43653 123 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 CFAP126Q5VTH2 177 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 TMEM243Q9BU79 118 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 TENM3Q9P273 2699 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 IGHV4-4A0A075B6R2 117 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 PHOX2AO14813 284 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 C18orf15Q96N68 181 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 NBEAL2Q6ZNJ1 2754 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 RNASE3P12724 160 aaKnown RBP6.17□□□□□ -1.42
U2AF1-212ENST00000496462 S100A2P29034 98 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 CRIP1P50238 77 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 FOXA3P55318 350 aaPredicted RBP6.17□□□□□ -1.42
U2AF1-212ENST00000496462 ORMDL2Q53FV1 153 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 FAM104BQ5XKR9 115 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 ZNF479Q96JC4 524 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 SSBP4Q9BWG4 385 aaPredicted RBP6.17□□□□□ -1.42
U2AF1-212ENST00000496462 TM2D2Q9BX73 214 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 GNB1LQ9BYB4 327 aa6.17□□□□□ -1.42
U2AF1-212ENST00000496462 C9JQL5 133 aa6.16□□□□□ -1.42
U2AF1-212ENST00000496462 I3L3M4 83 aa6.16□□□□□ -1.42
U2AF1-212ENST00000496462 LY6G6CO95867 125 aa6.16□□□□□ -1.42
U2AF1-212ENST00000496462 NCR2O95944 276 aa6.16□□□□□ -1.42
U2AF1-212ENST00000496462 GIG44P09565 113 aaPredicted RBP6.16□□□□□ -1.42
U2AF1-212ENST00000496462 ANKRD39Q53RE8 183 aa6.16□□□□□ -1.42
U2AF1-212ENST00000496462 C20orf78Q9BR46 151 aa6.16□□□□□ -1.42
U2AF1-212ENST00000496462 HSBP1O75506 76 aa6.16□□□□□ -1.42
U2AF1-212ENST00000496462 GATA1P15976 413 aaPredicted RBP6.16□□□□□ -1.42
U2AF1-212ENST00000496462 C11orf72Q8NBR9 251 aa6.16□□□□□ -1.42
U2AF1-212ENST00000496462 SAMD10Q9BYL1 202 aa6.16□□□□□ -1.42
U2AF1-212ENST00000496462 GTSF1LQ9H1H1 148 aa6.16□□□□□ -1.42
U2AF1-212ENST00000496462 MRPL18Q9H0U6 180 aaKnown RBP6.16□□□□□ -1.42
U2AF1-212ENST00000496462 C11orf21Q9P2W6 132 aa6.16□□□□□ -1.42
U2AF1-212ENST00000496462 PRKDCP78527 4128 aaKnown RBP6.15□□□□□ -1.42
U2AF1-212ENST00000496462 CRYBA4P53673 196 aa6.15□□□□□ -1.43
U2AF1-212ENST00000496462 NFE4Q86UQ8 179 aa6.15□□□□□ -1.43
U2AF1-212ENST00000496462 OR5A1Q8NGJ0 315 aa6.15□□□□□ -1.43
U2AF1-212ENST00000496462 COX11Q9Y6N1 276 aa6.15□□□□□ -1.43
U2AF1-212ENST00000496462 A0A096LPF7 62 aa6.14□□□□□ -1.43
U2AF1-212ENST00000496462 SDHAF1A6NFY7 115 aa6.14□□□□□ -1.43
U2AF1-212ENST00000496462 IFI27P40305 119 aaPredicted RBP6.14□□□□□ -1.43
U2AF1-212ENST00000496462 AKR1D1P51857 326 aa6.14□□□□□ -1.43
U2AF1-212ENST00000496462 AMN1Q8IY45 258 aa6.14□□□□□ -1.43
U2AF1-212ENST00000496462 CELA1Q9UNI1 258 aa6.14□□□□□ -1.43
U2AF1-212ENST00000496462 SUMO2P61956 95 aaKnown RBP6.14□□□□□ -1.43
U2AF1-212ENST00000496462 SUMO4Q6EEV6 95 aa6.14□□□□□ -1.43
U2AF1-212ENST00000496462 C2orf88Q9BSF0 95 aa6.14□□□□□ -1.43
U2AF1-212ENST00000496462 SCRT2Q9NQ03 307 aa6.14□□□□□ -1.43
U2AF1-212ENST00000496462 LOC389332A0A1B0GUA5 103 aa6.14□□□□□ -1.43
U2AF1-212ENST00000496462 CYSLTR1Q9Y271 337 aa6.14□□□□□ -1.43
U2AF1-212ENST00000496462 K7EMI3 77 aa6.13□□□□□ -1.43
U2AF1-212ENST00000496462 K7EP13 123 aa6.13□□□□□ -1.43
U2AF1-212ENST00000496462 SLC25A29Q8N8R3 303 aa6.13□□□□□ -1.43
U2AF1-212ENST00000496462 TRBV24-1A0A075B6N3 115 aa6.13□□□□□ -1.43
U2AF1-212ENST00000496462 C20orf202A1L168 122 aa6.13□□□□□ -1.43
U2AF1-212ENST00000496462 NDUFA6P56556 154 aa6.13□□□□□ -1.43
U2AF1-212ENST00000496462 AGRNO00468 2067 aa6.13□□□□□ -1.43
U2AF1-212ENST00000496462 D6R8Y8 96 aa6.13□□□□□ -1.43
U2AF1-212ENST00000496462 SIVA1O15304 175 aa6.13□□□□□ -1.43
U2AF1-212ENST00000496462 PRM2P04554 102 aa6.13□□□□□ -1.43
U2AF1-212ENST00000496462 FHL2Q14192 279 aa6.13□□□□□ -1.43
U2AF1-212ENST00000496462 LELP1Q5T871 98 aa6.13□□□□□ -1.43
U2AF1-212ENST00000496462 EDA2RQ9HAV5 297 aa6.13□□□□□ -1.43
U2AF1-212ENST00000496462 NXPH4O95158 308 aa6.12□□□□□ -1.43
U2AF1-212ENST00000496462 CNFNQ9BYD5 112 aa6.12□□□□□ -1.43
U2AF1-212ENST00000496462 TNFRSF6BO95407 300 aa6.12□□□□□ -1.43
U2AF1-212ENST00000496462 RAB4AP20338 218 aa6.12□□□□□ -1.43
U2AF1-212ENST00000496462 CHCHD7Q9BUK0 85 aa6.12□□□□□ -1.43
U2AF1-212ENST00000496462 CMYA5Q8N3K9 4069 aa6.12□□□□□ -1.43
U2AF1-212ENST00000496462 PCP4P48539 62 aa6.12□□□□□ -1.43
U2AF1-212ENST00000496462 MRPL51Q4U2R6 128 aaKnown RBP6.12□□□□□ -1.43
U2AF1-212ENST00000496462 C10orf91Q5T1B1 145 aa6.12□□□□□ -1.43
U2AF1-212ENST00000496462 ATRAIDQ6UW56 229 aa6.12□□□□□ -1.43
U2AF1-212ENST00000496462 GTSF1Q8WW33 167 aa6.12□□□□□ -1.43
U2AF1-212ENST00000496462 AP5S1Q9NUS5 200 aa6.12□□□□□ -1.43
U2AF1-212ENST00000496462 SEC11AP67812 179 aa6.11□□□□□ -1.43
U2AF1-212ENST00000496462 Q0VG73 95 aa6.11□□□□□ -1.43
U2AF1-212ENST00000496462 SS18Q15532 418 aa6.11□□□□□ -1.43
U2AF1-212ENST00000496462 POM121L12Q8N7R1 296 aa6.11□□□□□ -1.43
U2AF1-212ENST00000496462 PKIGQ9Y2B9 76 aa6.11□□□□□ -1.43
U2AF1-212ENST00000496462 H7C423 109 aa6.11□□□□□ -1.43
U2AF1-212ENST00000496462 CRYGDP07320 174 aa6.11□□□□□ -1.43
U2AF1-212ENST00000496462 LINC00612Q8N6U2 182 aa6.11□□□□□ -1.43
U2AF1-212ENST00000496462 TRAV8-3A0A0A6YYJ7 113 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms