RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 GCN1Q92616 2671 aaKnown RBP8.51□□□□□ -1.05
CDCA7-208ENST00000496441 ZNF815PA8K554 130 aa8.51□□□□□ -1.05
CDCA7-208ENST00000496441 SAP30O75446 220 aa8.51□□□□□ -1.05
CDCA7-208ENST00000496441 CRYGDP07320 174 aa8.51□□□□□ -1.05
CDCA7-208ENST00000496441 SYT8Q8NBV8 401 aa8.51□□□□□ -1.05
CDCA7-208ENST00000496441 VCYO14598 125 aa8.51□□□□□ -1.05
CDCA7-208ENST00000496441 MED14OSP0DP75 135 aa8.51□□□□□ -1.05
CDCA7-208ENST00000496441 ZNF580Q9UK33 172 aa8.51□□□□□ -1.05
CDCA7-208ENST00000496441 TRBV7-9A0A0J9YWB2 115 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 POLR2KP53803 58 aaKnown RBP8.5□□□□□ -1.05
CDCA7-208ENST00000496441 MORN3Q6PF18 240 aaPredicted RBP8.5□□□□□ -1.05
CDCA7-208ENST00000496441 PLEKHB2Q96CS7 222 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 VPS25Q9BRG1 176 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 UNC79Q9P2D8 2635 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 A0A1W2PPM0 123 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 LINC01619G3V211 115 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 CEMP1Q6PRD7 247 aaPredicted RBP8.5□□□□□ -1.05
CDCA7-208ENST00000496441 GTF2H5Q6ZYL4 71 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 TRAV12-1A0A0B4J245 112 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 MYMXA0A1B0GTQ4 84 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 M0QY20 66 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 PPP1R17O96001 155 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 FABP2P12104 132 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 SRSF9Q13242 221 aaKnown RBP eCLIP8.5□□□□□ -1.05
CDCA7-208ENST00000496441 AMTNQ6UX39 209 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 FOXI2Q6ZQN5 318 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 C9orf85Q96MD7 179 aa8.5□□□□□ -1.05
CDCA7-208ENST00000496441 RBMY1BA6NDE4 496 aaKnown RBP8.49□□□□□ -1.05
CDCA7-208ENST00000496441 RBMY1EA6NEQ0 496 aaKnown RBP8.49□□□□□ -1.05
CDCA7-208ENST00000496441 NXPH4O95158 308 aa8.49□□□□□ -1.05
CDCA7-208ENST00000496441 RBMY1DP0C7P1 496 aaKnown RBP8.49□□□□□ -1.05
CDCA7-208ENST00000496441 RBX1P62877 108 aa8.49□□□□□ -1.05
CDCA7-208ENST00000496441 OCIAD2Q56VL3 154 aa8.49□□□□□ -1.05
CDCA7-208ENST00000496441 XCL2Q9UBD3 114 aa8.49□□□□□ -1.05
CDCA7-208ENST00000496441 LINC01587Q99440 93 aa8.49□□□□□ -1.05
CDCA7-208ENST00000496441 IGHV3-38A0A0C4DH36 116 aa8.48□□□□□ -1.05
CDCA7-208ENST00000496441 FSHBP01225 129 aa8.48□□□□□ -1.05
CDCA7-208ENST00000496441 SAMD13Q5VXD3 122 aa8.48□□□□□ -1.05
CDCA7-208ENST00000496441 PDZD2O15018 2839 aa8.48□□□□□ -1.05
CDCA7-208ENST00000496441 LGALS9O00182 355 aa8.48□□□□□ -1.05
CDCA7-208ENST00000496441 IGIPA6NJ69 53 aa8.47□□□□□ -1.05
CDCA7-208ENST00000496441 K7EP34 96 aa8.47□□□□□ -1.05
CDCA7-208ENST00000496441 PMVKQ15126 192 aa8.47□□□□□ -1.05
CDCA7-208ENST00000496441 ZNRF2Q8NHG8 242 aa8.47□□□□□ -1.05
CDCA7-208ENST00000496441 SPAG8Q99932 426 aaPredicted RBP8.47□□□□□ -1.05
CDCA7-208ENST00000496441 MRPL16Q9NX20 251 aaKnown RBP8.47□□□□□ -1.05
CDCA7-208ENST00000496441 HIGD1BQ9P298 99 aa8.47□□□□□ -1.05
CDCA7-208ENST00000496441 CBY1Q9Y3M2 126 aa8.47□□□□□ -1.05
CDCA7-208ENST00000496441 IGLV4-69A0A075B6H9 119 aa8.47□□□□□ -1.05
CDCA7-208ENST00000496441 TMEM89A2RUT3 159 aa8.47□□□□□ -1.05
CDCA7-208ENST00000496441 H3BMM0 161 aa8.47□□□□□ -1.05
CDCA7-208ENST00000496441 PCP4P48539 62 aa8.47□□□□□ -1.05
CDCA7-208ENST00000496441 PHLDA1Q8WV24 401 aaPredicted RBP8.47□□□□□ -1.05
CDCA7-208ENST00000496441 APOMO95445 188 aa8.47□□□□□ -1.05
CDCA7-208ENST00000496441 Q6ZSV7 163 aa8.47□□□□□ -1.05
CDCA7-208ENST00000496441 RPL24P83731 157 aaKnown RBP8.46□□□□□ -1.06
CDCA7-208ENST00000496441 C12orf74Q32Q52 190 aa8.46□□□□□ -1.06
CDCA7-208ENST00000496441 Q6ZSN1 163 aa8.46□□□□□ -1.06
CDCA7-208ENST00000496441 VWFP04275 2813 aa8.46□□□□□ -1.06
CDCA7-208ENST00000496441 TRBV27A0A0K0K1C4 114 aa8.46□□□□□ -1.06
CDCA7-208ENST00000496441 MAP6D1Q9H9H5 199 aa8.46□□□□□ -1.06
CDCA7-208ENST00000496441 PEMTQ9UBM1 199 aa8.46□□□□□ -1.06
CDCA7-208ENST00000496441 TRGV11A0A075B6L2 103 aa8.45□□□□□ -1.06
CDCA7-208ENST00000496441 DNAJC9-AS1A6NH13 148 aa8.45□□□□□ -1.06
CDCA7-208ENST00000496441 E9PLD3 99 aa8.45□□□□□ -1.06
CDCA7-208ENST00000496441 TSPEAR-AS2P59090 65 aa8.45□□□□□ -1.06
CDCA7-208ENST00000496441 UFSP1Q6NVU6 142 aa8.45□□□□□ -1.06
CDCA7-208ENST00000496441 TRPT1Q86TN4 253 aaKnown RBP8.45□□□□□ -1.06
CDCA7-208ENST00000496441 KRTAP1-3Q8IUG1 177 aa8.45□□□□□ -1.06
CDCA7-208ENST00000496441 ZNF479Q96JC4 524 aa8.45□□□□□ -1.06
CDCA7-208ENST00000496441 ADARB2-AS1A8MUL3 147 aa8.45□□□□□ -1.06
CDCA7-208ENST00000496441 H3BMG7 143 aa8.45□□□□□ -1.06
CDCA7-208ENST00000496441 TM2D2Q9BX73 214 aa8.45□□□□□ -1.06
CDCA7-208ENST00000496441 ESM1Q9NQ30 184 aa8.45□□□□□ -1.06
CDCA7-208ENST00000496441 CD28P10747 220 aa8.44□□□□□ -1.06
CDCA7-208ENST00000496441 POM121L12Q8N7R1 296 aa8.44□□□□□ -1.06
CDCA7-208ENST00000496441 A0A0J9YXV3 536 aa8.44□□□□□ -1.06
CDCA7-208ENST00000496441 IGHV3-53P01767 116 aa8.44□□□□□ -1.06
CDCA7-208ENST00000496441 RIPPLY3P57055 190 aa8.44□□□□□ -1.06
CDCA7-208ENST00000496441 ODF3Q96PU9 254 aa8.44□□□□□ -1.06
CDCA7-208ENST00000496441 TNFRSF18Q9Y5U5 241 aa8.44□□□□□ -1.06
CDCA7-208ENST00000496441 IGLL5B9A064 214 aa8.43□□□□□ -1.06
CDCA7-208ENST00000496441 I3L3M4 83 aa8.43□□□□□ -1.06
CDCA7-208ENST00000496441 AZU1P20160 251 aa8.43□□□□□ -1.06
CDCA7-208ENST00000496441 DEFB114Q30KQ6 69 aa8.43□□□□□ -1.06
CDCA7-208ENST00000496441 C4orf3Q8WVX3 66 aa8.43□□□□□ -1.06
CDCA7-208ENST00000496441 RAX2Q96IS3 184 aa8.43□□□□□ -1.06
CDCA7-208ENST00000496441 SPXQ9BT56 116 aa8.43□□□□□ -1.06
CDCA7-208ENST00000496441 TRBV7-3A0A075B6L6 115 aa8.43□□□□□ -1.06
CDCA7-208ENST00000496441 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.43□□□□□ -1.06
CDCA7-208ENST00000496441 IGKV2-29A2NJV5 120 aaPredicted RBP8.43□□□□□ -1.06
CDCA7-208ENST00000496441 HERVK_113P61574 105 aa8.43□□□□□ -1.06
CDCA7-208ENST00000496441 CITED2Q99967 270 aaPredicted RBP8.43□□□□□ -1.06
CDCA7-208ENST00000496441 WFDC10AQ9H1F0 79 aa8.43□□□□□ -1.06
CDCA7-208ENST00000496441 VCX2Q9H322 139 aa8.43□□□□□ -1.06
CDCA7-208ENST00000496441 YAE1D1Q9NRH1 226 aa8.43□□□□□ -1.06
CDCA7-208ENST00000496441 LOC107984156A0A0G2JMH3 177 aa8.42□□□□□ -1.06
CDCA7-208ENST00000496441 ARL17AQ8IVW1 177 aa8.42□□□□□ -1.06
CDCA7-208ENST00000496441 PGPEP1Q9NXJ5 209 aa8.42□□□□□ -1.06
CDCA7-208ENST00000496441 C20orf203Q8NBC4 194 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms