RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 F5H697 171 aa8.42□□□□□ -1.06
USF1-207ENST00000496363 SNAI2O43623 268 aa8.42□□□□□ -1.06
USF1-207ENST00000496363 PRSS1P07477 247 aa8.42□□□□□ -1.06
USF1-207ENST00000496363 CXCL1P09341 107 aa8.42□□□□□ -1.06
USF1-207ENST00000496363 BAGE2Q86Y30 109 aa8.42□□□□□ -1.06
USF1-207ENST00000496363 MLST8Q9BVC4 326 aa8.42□□□□□ -1.06
USF1-207ENST00000496363 SSBP4Q9BWG4 385 aaPredicted RBP8.42□□□□□ -1.06
USF1-207ENST00000496363 HNRNPA3P51991 378 aaKnown RBP8.41□□□□□ -1.06
USF1-207ENST00000496363 GAGE6Q13070 117 aa8.41□□□□□ -1.06
USF1-207ENST00000496363 SPANXN1Q5VSR9 72 aa8.41□□□□□ -1.06
USF1-207ENST00000496363 MBD3L1Q8WWY6 194 aa8.41□□□□□ -1.06
USF1-207ENST00000496363 PFDN1O60925 122 aa8.4□□□□□ -1.06
USF1-207ENST00000496363 OXTP01178 125 aa8.4□□□□□ -1.06
USF1-207ENST00000496363 S100A9P06702 114 aaKnown RBP8.4□□□□□ -1.06
USF1-207ENST00000496363 OR5AL1P0C617 328 aa8.4□□□□□ -1.06
USF1-207ENST00000496363 RPL37AP61513 92 aaKnown RBP8.4□□□□□ -1.06
USF1-207ENST00000496363 RBX1P62877 108 aa8.4□□□□□ -1.06
USF1-207ENST00000496363 MIAQ16674 131 aa8.4□□□□□ -1.06
USF1-207ENST00000496363 KRTAP26-1Q6PEX3 210 aa8.4□□□□□ -1.06
USF1-207ENST00000496363 VAX2Q9UIW0 290 aa8.4□□□□□ -1.06
USF1-207ENST00000496363 KIF25-AS1Q9Y6Z4 181 aa8.4□□□□□ -1.06
USF1-207ENST00000496363 PANO1I0J062 215 aa8.39□□□□□ -1.07
USF1-207ENST00000496363 GZMBP10144 247 aa8.39□□□□□ -1.07
USF1-207ENST00000496363 LINC00269Q8N2A0 174 aa8.39□□□□□ -1.07
USF1-207ENST00000496363 KCNRGQ8N5I3 272 aa8.39□□□□□ -1.07
USF1-207ENST00000496363 DERL1Q9BUN8 251 aa8.39□□□□□ -1.07
USF1-207ENST00000496363 PRR34Q9NV39 138 aa8.39□□□□□ -1.07
USF1-207ENST00000496363 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.39□□□□□ -1.07
USF1-207ENST00000496363 SMIM17P0DL12 118 aa8.38□□□□□ -1.07
USF1-207ENST00000496363 PKIAP61925 76 aa8.38□□□□□ -1.07
USF1-207ENST00000496363 SERTAD4-AS1Q5TG53 156 aa8.38□□□□□ -1.07
USF1-207ENST00000496363 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.38□□□□□ -1.07
USF1-207ENST00000496363 DAZAP1Q96EP5 407 aaKnown RBP8.38□□□□□ -1.07
USF1-207ENST00000496363 AP1S3Q96PC3 154 aa8.38□□□□□ -1.07
USF1-207ENST00000496363 IGLV10-54A0A075B6I4 117 aa8.37□□□□□ -1.07
USF1-207ENST00000496363 TRBV25-1A0A075B6N4 114 aa8.37□□□□□ -1.07
USF1-207ENST00000496363 UMAD1C9J7I0 102 aa8.37□□□□□ -1.07
USF1-207ENST00000496363 MGPP08493 103 aa8.37□□□□□ -1.07
USF1-207ENST00000496363 RPL35P42766 123 aaKnown RBP8.37□□□□□ -1.07
USF1-207ENST00000496363 ZNF345Q14585 488 aa8.37□□□□□ -1.07
USF1-207ENST00000496363 RGS21Q2M5E4 152 aa8.37□□□□□ -1.07
USF1-207ENST00000496363 TMEM97Q5BJF2 176 aa8.37□□□□□ -1.07
USF1-207ENST00000496363 TMUB2Q71RG4 321 aa8.37□□□□□ -1.07
USF1-207ENST00000496363 C9orf163Q8N9P6 203 aa8.37□□□□□ -1.07
USF1-207ENST00000496363 TPPP3Q9BW30 176 aa8.37□□□□□ -1.07
USF1-207ENST00000496363 H2AFB1P0C5Y9 115 aa8.36□□□□□ -1.07
USF1-207ENST00000496363 SUMO4Q6EEV6 95 aa8.36□□□□□ -1.07
USF1-207ENST00000496363 DGAT2L7PQ6IED9 249 aa8.36□□□□□ -1.07
USF1-207ENST00000496363 TNXBP22105 4242 aa8.35□□□□□ -1.07
USF1-207ENST00000496363 IGHV1-24A0A0C4DH33 117 aa8.35□□□□□ -1.07
USF1-207ENST00000496363 M0QY20 66 aa8.35□□□□□ -1.07
USF1-207ENST00000496363 BCL2L11O43521 198 aa8.35□□□□□ -1.07
USF1-207ENST00000496363 CCL20P78556 96 aa8.35□□□□□ -1.07
USF1-207ENST00000496363 IQCJQ1A5X6 159 aa8.35□□□□□ -1.07
USF1-207ENST00000496363 CENPWQ5EE01 88 aa8.35□□□□□ -1.07
USF1-207ENST00000496363 C20orf203Q8NBC4 194 aa8.35□□□□□ -1.07
USF1-207ENST00000496363 KANTRA0A1W2PQU2 76 aa8.34□□□□□ -1.07
USF1-207ENST00000496363 IGLC6P0CF74 106 aa8.34□□□□□ -1.07
USF1-207ENST00000496363 NKX2-5P52952 324 aaPredicted RBP8.34□□□□□ -1.07
USF1-207ENST00000496363 REG3AQ06141 175 aa8.34□□□□□ -1.07
USF1-207ENST00000496363 SDIM1Q6ZPB5 146 aa8.34□□□□□ -1.07
USF1-207ENST00000496363 FER1L6-AS1Q8NA97 138 aa8.34□□□□□ -1.07
USF1-207ENST00000496363 C11orf52Q96A22 123 aa8.34□□□□□ -1.07
USF1-207ENST00000496363 GFRA4Q9GZZ7 299 aa8.34□□□□□ -1.07
USF1-207ENST00000496363 GNG13Q9P2W3 67 aa8.34□□□□□ -1.07
USF1-207ENST00000496363 PLA2G2DQ9UNK4 145 aa8.34□□□□□ -1.07
USF1-207ENST00000496363 IGLV4-60A0A075B6I1 120 aa8.33□□□□□ -1.08
USF1-207ENST00000496363 HMSDA8MTL9 139 aa8.33□□□□□ -1.08
USF1-207ENST00000496363 OR2D3Q8NGH3 330 aa8.33□□□□□ -1.08
USF1-207ENST00000496363 A0A0D9SG52 128 aa8.32□□□□□ -1.08
USF1-207ENST00000496363 hDV102S1A0JD36 115 aa8.32□□□□□ -1.08
USF1-207ENST00000496363 RAB19A4D1S5 217 aa8.32□□□□□ -1.08
USF1-207ENST00000496363 RAB5CP51148 216 aa8.32□□□□□ -1.08
USF1-207ENST00000496363 TMEM243Q9BU79 118 aa8.32□□□□□ -1.08
USF1-207ENST00000496363 MANBALQ9NQG1 85 aa8.32□□□□□ -1.08
USF1-207ENST00000496363 C19orf71A6NCJ1 209 aa8.31□□□□□ -1.08
USF1-207ENST00000496363 H7C1H1 209 aa8.31□□□□□ -1.08
USF1-207ENST00000496363 SLPIP03973 132 aa8.31□□□□□ -1.08
USF1-207ENST00000496363 CHTF8P0CG12 524 aa8.31□□□□□ -1.08
USF1-207ENST00000496363 CNBPP62633 177 aaKnown RBP8.31□□□□□ -1.08
USF1-207ENST00000496363 CACNG7P62955 275 aa8.31□□□□□ -1.08
USF1-207ENST00000496363 CLRN3Q8NCR9 226 aa8.31□□□□□ -1.08
USF1-207ENST00000496363 RPS20P60866 119 aaKnown RBP8.3□□□□□ -1.08
USF1-207ENST00000496363 RASL11AQ6T310 242 aa8.3□□□□□ -1.08
USF1-207ENST00000496363 TRAV8-4A0A0B4J246 113 aa8.29□□□□□ -1.08
USF1-207ENST00000496363 A0A1B0GUV1 79 aa8.29□□□□□ -1.08
USF1-207ENST00000496363 P01737 135 aa8.29□□□□□ -1.08
USF1-207ENST00000496363 MT1HL1P0DM35 61 aa8.29□□□□□ -1.08
USF1-207ENST00000496363 GNG4P50150 75 aa8.29□□□□□ -1.08
USF1-207ENST00000496363 CIRBPQ14011 172 aaKnown RBP8.29□□□□□ -1.08
USF1-207ENST00000496363 LYZL1Q6UWQ5 148 aa8.29□□□□□ -1.08
USF1-207ENST00000496363 TRBV20OR9-2A0A075B6H5 130 aa8.28□□□□□ -1.08
USF1-207ENST00000496363 IGHV3-64A0A075B6Q5 118 aa8.28□□□□□ -1.08
USF1-207ENST00000496363 TRAV1-1A0A0B4J248 108 aa8.28□□□□□ -1.08
USF1-207ENST00000496363 EIF5AP63241 154 aaKnown RBP8.28□□□□□ -1.08
USF1-207ENST00000496363 PGLYRP4Q96LB8 373 aa8.28□□□□□ -1.08
USF1-207ENST00000496363 DPH3P1Q9H4G8 78 aa8.28□□□□□ -1.08
USF1-207ENST00000496363 NIT2Q9NQR4 276 aa8.28□□□□□ -1.08
USF1-207ENST00000496363 AP5S1Q9NUS5 200 aa8.28□□□□□ -1.08
USF1-207ENST00000496363 A0A087WYN8 130 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms