RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 RHODO00212 210 aa11.75□□□□□ -0.53
HLA-A-208ENST00000496081 PKD1L1Q8TDX9 2849 aa11.75□□□□□ -0.53
HLA-A-208ENST00000496081 H7C1H1 209 aa11.74□□□□□ -0.53
HLA-A-208ENST00000496081 VCYO14598 125 aa11.74□□□□□ -0.53
HLA-A-208ENST00000496081 APOC4P55056 127 aa11.74□□□□□ -0.53
HLA-A-208ENST00000496081 KRTAP10-11P60412 298 aa11.74□□□□□ -0.53
HLA-A-208ENST00000496081 OVOL2Q9BRP0 275 aa11.74□□□□□ -0.53
HLA-A-208ENST00000496081 TRBV27A0A0K0K1C4 114 aa11.74□□□□□ -0.53
HLA-A-208ENST00000496081 P0DMU3 169 aa11.74□□□□□ -0.53
HLA-A-208ENST00000496081 FAM231AP0DMU4 169 aa11.74□□□□□ -0.53
HLA-A-208ENST00000496081 FAM231CP0DMU5 169 aa11.74□□□□□ -0.53
HLA-A-208ENST00000496081 ORMDL2Q53FV1 153 aa11.74□□□□□ -0.53
HLA-A-208ENST00000496081 ZFP2Q6ZN57 461 aa11.74□□□□□ -0.53
HLA-A-208ENST00000496081 OR4C5Q8NGB2 326 aa11.74□□□□□ -0.53
HLA-A-208ENST00000496081 X6R8D5 127 aa11.74□□□□□ -0.53
HLA-A-208ENST00000496081 H0Y8G0 127 aa11.73□□□□□ -0.53
HLA-A-208ENST00000496081 NUDT3O95989 172 aa11.73□□□□□ -0.53
HLA-A-208ENST00000496081 IGHV4-30-4P0DP06 118 aa11.73□□□□□ -0.53
HLA-A-208ENST00000496081 EGFEM1PQ0D2K5 195 aa11.73□□□□□ -0.53
HLA-A-208ENST00000496081 PET117Q6UWS5 81 aa11.73□□□□□ -0.53
HLA-A-208ENST00000496081 ZNF664Q8N3J9 261 aa11.73□□□□□ -0.53
HLA-A-208ENST00000496081 C18orf15Q96N68 181 aa11.73□□□□□ -0.53
HLA-A-208ENST00000496081 ANK2Q01484 3957 aa11.73□□□□□ -0.53
HLA-A-208ENST00000496081 IGHV3-53P01767 116 aa11.72□□□□□ -0.53
HLA-A-208ENST00000496081 PKIAP61925 76 aa11.72□□□□□ -0.53
HLA-A-208ENST00000496081 IFI27L1Q96BM0 104 aa11.72□□□□□ -0.53
HLA-A-208ENST00000496081 ZNF479Q96JC4 524 aa11.72□□□□□ -0.53
HLA-A-208ENST00000496081 DEFB104AQ8WTQ1 72 aa11.72□□□□□ -0.53
HLA-A-208ENST00000496081 Q9UF83 564 aa11.72□□□□□ -0.53
HLA-A-208ENST00000496081 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.54
HLA-A-208ENST00000496081 SMIM9A6NGZ8 99 aa11.71□□□□□ -0.54
HLA-A-208ENST00000496081 DEFB135Q30KP9 77 aa11.71□□□□□ -0.54
HLA-A-208ENST00000496081 ATOH7Q8N100 152 aa11.71□□□□□ -0.54
HLA-A-208ENST00000496081 KIR2DL4Q99706 377 aa11.71□□□□□ -0.54
HLA-A-208ENST00000496081 CMYA5Q8N3K9 4069 aa11.7□□□□□ -0.54
HLA-A-208ENST00000496081 GAGE12BA1L429 117 aa11.7□□□□□ -0.54
HLA-A-208ENST00000496081 GAGE7O76087 117 aa11.7□□□□□ -0.54
HLA-A-208ENST00000496081 GAGE12FP0CL80 117 aa11.7□□□□□ -0.54
HLA-A-208ENST00000496081 GAGE12GP0CL81 117 aa11.7□□□□□ -0.54
HLA-A-208ENST00000496081 GAGE12IP0CL82 117 aa11.7□□□□□ -0.54
HLA-A-208ENST00000496081 EMP1P54849 157 aa11.7□□□□□ -0.54
HLA-A-208ENST00000496081 PRO1933Q9H354 126 aa11.7□□□□□ -0.54
HLA-A-208ENST00000496081 NBEAL2Q6ZNJ1 2754 aa11.7□□□□□ -0.54
HLA-A-208ENST00000496081 C20orf202A1L168 122 aa11.69□□□□□ -0.54
HLA-A-208ENST00000496081 TSTD3H0UI37 97 aa11.69□□□□□ -0.54
HLA-A-208ENST00000496081 LINC01545Q5VT33 79 aa11.69□□□□□ -0.54
HLA-A-208ENST00000496081 TOMM6Q96B49 74 aa11.69□□□□□ -0.54
HLA-A-208ENST00000496081 VAMP8Q9BV40 100 aa11.69□□□□□ -0.54
HLA-A-208ENST00000496081 C2orf66Q6UXQ4 117 aa11.69□□□□□ -0.54
HLA-A-208ENST00000496081 NEXN-AS1Q8NBZ9 246 aa11.69□□□□□ -0.54
HLA-A-208ENST00000496081 TNFRSF18Q9Y5U5 241 aa11.69□□□□□ -0.54
HLA-A-208ENST00000496081 TRGV2A0A075B6R0 118 aa11.68□□□□□ -0.54
HLA-A-208ENST00000496081 I3L3M4 83 aa11.68□□□□□ -0.54
HLA-A-208ENST00000496081 PMCHL2Q9BQD1 86 aa11.68□□□□□ -0.54
HLA-A-208ENST00000496081 PAM16Q9Y3D7 125 aa11.68□□□□□ -0.54
HLA-A-208ENST00000496081 LINC00587B1AMM8 73 aa11.67□□□□□ -0.54
HLA-A-208ENST00000496081 G3V4G9 280 aa11.67□□□□□ -0.54
HLA-A-208ENST00000496081 ATP5LO75964 103 aa11.67□□□□□ -0.54
HLA-A-208ENST00000496081 TSHBP01222 138 aa11.67□□□□□ -0.54
HLA-A-208ENST00000496081 MAJINQ3KP22 176 aa11.67□□□□□ -0.54
HLA-A-208ENST00000496081 OR11H2Q8NH07 326 aa11.67□□□□□ -0.54
HLA-A-208ENST00000496081 DNAJC30Q96LL9 226 aa11.67□□□□□ -0.54
HLA-A-208ENST00000496081 ZMAT5Q9UDW3 170 aaKnown RBP11.67□□□□□ -0.54
HLA-A-208ENST00000496081 LGALS9CQ6DKI2 356 aa11.66□□□□□ -0.54
HLA-A-208ENST00000496081 PRSS1P07477 247 aa11.65□□□□□ -0.54
HLA-A-208ENST00000496081 G0S2P27469 103 aa11.65□□□□□ -0.54
HLA-A-208ENST00000496081 LINC00612Q8N6U2 182 aa11.65□□□□□ -0.54
HLA-A-208ENST00000496081 SCGB3A1Q96QR1 104 aa11.65□□□□□ -0.54
HLA-A-208ENST00000496081 CYSLTR1Q9Y271 337 aa11.65□□□□□ -0.54
HLA-A-208ENST00000496081 TRAV9-2A0A087WT02 112 aa11.64□□□□□ -0.55
HLA-A-208ENST00000496081 A8MZ25 164 aa11.64□□□□□ -0.55
HLA-A-208ENST00000496081 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.64□□□□□ -0.55
HLA-A-208ENST00000496081 K7EQD1 137 aa11.64□□□□□ -0.55
HLA-A-208ENST00000496081 CIDEAO60543 219 aa11.64□□□□□ -0.55
HLA-A-208ENST00000496081 RHOHQ15669 191 aa11.64□□□□□ -0.55
HLA-A-208ENST00000496081 RNF183Q96D59 192 aa11.64□□□□□ -0.55
HLA-A-208ENST00000496081 TP53TG1Q9Y2A0 90 aa11.64□□□□□ -0.55
HLA-A-208ENST00000496081 DNHD1Q96M86 4753 aa11.64□□□□□ -0.55
HLA-A-208ENST00000496081 SPATA45Q537H7 98 aa11.64□□□□□ -0.55
HLA-A-208ENST00000496081 SAMD5Q5TGI4 173 aa11.64□□□□□ -0.55
HLA-A-208ENST00000496081 SLC25A29Q8N8R3 303 aa11.64□□□□□ -0.55
HLA-A-208ENST00000496081 IGHV4-28A0A0C4DH34 117 aa11.63□□□□□ -0.55
HLA-A-208ENST00000496081 DEFB130BP0DP73 79 aa11.63□□□□□ -0.55
HLA-A-208ENST00000496081 DEFB130AP0DP74 79 aa11.63□□□□□ -0.55
HLA-A-208ENST00000496081 RPL39P62891 51 aaKnown RBP11.63□□□□□ -0.55
HLA-A-208ENST00000496081 ERASQ7Z444 233 aa11.63□□□□□ -0.55
HLA-A-208ENST00000496081 TRBV10-1A0A0K0K1A3 114 aa11.62□□□□□ -0.55
HLA-A-208ENST00000496081 LINC01549A6NIU2 74 aa11.62□□□□□ -0.55
HLA-A-208ENST00000496081 ODF1Q14990 250 aa11.62□□□□□ -0.55
HLA-A-208ENST00000496081 ZNRF2Q8NHG8 242 aa11.62□□□□□ -0.55
HLA-A-208ENST00000496081 ZMAT4Q9H898 229 aa11.62□□□□□ -0.55
HLA-A-208ENST00000496081 DKK2Q9UBU2 259 aa11.62□□□□□ -0.55
HLA-A-208ENST00000496081 TRBV7-3A0A075B6L6 115 aa11.62□□□□□ -0.55
HLA-A-208ENST00000496081 DEFB4AO15263 64 aa11.62□□□□□ -0.55
HLA-A-208ENST00000496081 MIFP14174 115 aa11.62□□□□□ -0.55
HLA-A-208ENST00000496081 DDTP30046 118 aa11.62□□□□□ -0.55
HLA-A-208ENST00000496081 FHL2Q14192 279 aa11.62□□□□□ -0.55
HLA-A-208ENST00000496081 Q6ZN92 141 aa11.62□□□□□ -0.55
HLA-A-208ENST00000496081 Q8NAQ8 132 aa11.62□□□□□ -0.55
HLA-A-208ENST00000496081 C20orf203Q8NBC4 194 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms