RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 F5H697 171 aa4.75□□□□□ -1.65
VPS52-221ENST00000495755 LECT2O14960 151 aa4.75□□□□□ -1.65
VPS52-221ENST00000495755 IFNA1P01562 189 aa4.75□□□□□ -1.65
VPS52-221ENST00000495755 SMR3BP02814 79 aaPredicted RBP4.75□□□□□ -1.65
VPS52-221ENST00000495755 BCL2P10415 239 aa4.75□□□□□ -1.65
VPS52-221ENST00000495755 SSTP61278 116 aa4.75□□□□□ -1.65
VPS52-221ENST00000495755 Q5VSD8 79 aa4.75□□□□□ -1.65
VPS52-221ENST00000495755 NTM-AS1Q6ZSK4 140 aa4.75□□□□□ -1.65
VPS52-221ENST00000495755 FER1L6-AS1Q8NA97 138 aa4.75□□□□□ -1.65
VPS52-221ENST00000495755 OR2D3Q8NGH3 330 aa4.75□□□□□ -1.65
VPS52-221ENST00000495755 RMI2Q96E14 147 aa4.75□□□□□ -1.65
VPS52-221ENST00000495755 DAZAP1Q96EP5 407 aaKnown RBP4.75□□□□□ -1.65
VPS52-221ENST00000495755 AP1S3Q96PC3 154 aa4.75□□□□□ -1.65
VPS52-221ENST00000495755 MED9Q9NWA0 146 aa4.75□□□□□ -1.65
VPS52-221ENST00000495755 FAM30AQ9NZY2 134 aa4.75□□□□□ -1.65
VPS52-221ENST00000495755 VAX2Q9UIW0 290 aa4.75□□□□□ -1.65
VPS52-221ENST00000495755 IGKV2D-24A0A075B6R9 120 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 TMEM262E9PQX1 116 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 F2Z2F3 143 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 M0QY20 66 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 SMIM17P0DL12 118 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 INAFM2P0DMQ5 153 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 CACNG7P62955 275 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 HAMPP81172 84 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 Q0VG73 95 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 TMEM97Q5BJF2 176 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 KCNIP4Q6PIL6 250 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 ENHOQ6UWT2 76 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 Q6ZSA8 131 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 C9orf62Q8N4C0 152 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 Q8N976 141 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 FRZBQ92765 325 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 UBE2WQ96B02 151 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 TPPP3Q9BW30 176 aa4.74□□□□□ -1.65
VPS52-221ENST00000495755 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.73□□□□□ -1.65
VPS52-221ENST00000495755 XKRY2A2RUG3 117 aa4.73□□□□□ -1.65
VPS52-221ENST00000495755 FAM229AH3BQW9 127 aa4.73□□□□□ -1.65
VPS52-221ENST00000495755 P01737 135 aa4.73□□□□□ -1.65
VPS52-221ENST00000495755 TAGLN2P37802 199 aaKnown RBP4.73□□□□□ -1.65
VPS52-221ENST00000495755 PKIAP61925 76 aa4.73□□□□□ -1.65
VPS52-221ENST00000495755 MPV17L2Q567V2 206 aa4.73□□□□□ -1.65
VPS52-221ENST00000495755 SUMO4Q6EEV6 95 aa4.73□□□□□ -1.65
VPS52-221ENST00000495755 WDR73Q6P4I2 378 aa4.73□□□□□ -1.65
VPS52-221ENST00000495755 LYZL1Q6UWQ5 148 aa4.73□□□□□ -1.65
VPS52-221ENST00000495755 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.73□□□□□ -1.65
VPS52-221ENST00000495755 NUDT10Q8NFP7 164 aa4.73□□□□□ -1.65
VPS52-221ENST00000495755 NUDT11Q96G61 164 aa4.73□□□□□ -1.65
VPS52-221ENST00000495755 CHCHD5Q9BSY4 110 aa4.73□□□□□ -1.65
VPS52-221ENST00000495755 BIN3Q9NQY0 253 aa4.73□□□□□ -1.65
VPS52-221ENST00000495755 H7C1H1 209 aa4.72□□□□□ -1.65
VPS52-221ENST00000495755 K7EN84 100 aa4.72□□□□□ -1.65
VPS52-221ENST00000495755 NTF3P20783 257 aa4.72□□□□□ -1.65
VPS52-221ENST00000495755 CTRLP40313 264 aa4.72□□□□□ -1.65
VPS52-221ENST00000495755 RBX1P62877 108 aa4.72□□□□□ -1.65
VPS52-221ENST00000495755 IQCJQ1A5X6 159 aa4.72□□□□□ -1.65
VPS52-221ENST00000495755 AKAP14Q86UN6 197 aa4.72□□□□□ -1.65
VPS52-221ENST00000495755 C15orf54Q8N8G6 183 aa4.72□□□□□ -1.65
VPS52-221ENST00000495755 LYPD6BQ8NI32 183 aa4.72□□□□□ -1.65
VPS52-221ENST00000495755 OCC1Q8TAD7 63 aa4.72□□□□□ -1.65
VPS52-221ENST00000495755 PRR34Q9NV39 138 aa4.72□□□□□ -1.65
VPS52-221ENST00000495755 DMBT1Q9UGM3 2413 aaPredicted RBP4.71□□□□□ -1.66
VPS52-221ENST00000495755 TRBV25-1A0A075B6N4 114 aa4.71□□□□□ -1.66
VPS52-221ENST00000495755 IGHV1-24A0A0C4DH33 117 aa4.71□□□□□ -1.66
VPS52-221ENST00000495755 ANGP03950 147 aaKnown RBP4.71□□□□□ -1.66
VPS52-221ENST00000495755 MGPP08493 103 aa4.71□□□□□ -1.66
VPS52-221ENST00000495755 TRGC1P0CF51 173 aa4.71□□□□□ -1.66
VPS52-221ENST00000495755 BLOC1S1P78537 153 aa4.71□□□□□ -1.66
VPS52-221ENST00000495755 GAGE6Q13070 117 aa4.71□□□□□ -1.66
VPS52-221ENST00000495755 MIAQ16674 131 aa4.71□□□□□ -1.66
VPS52-221ENST00000495755 LINC01620Q4KN68 170 aa4.71□□□□□ -1.66
VPS52-221ENST00000495755 KRTAP26-1Q6PEX3 210 aa4.71□□□□□ -1.66
VPS52-221ENST00000495755 RASL11AQ6T310 242 aa4.71□□□□□ -1.66
VPS52-221ENST00000495755 ALKAL2Q6UX46 152 aa4.71□□□□□ -1.66
VPS52-221ENST00000495755 C1orf43Q9BWL3 253 aa4.71□□□□□ -1.66
VPS52-221ENST00000495755 CNFNQ9BYD5 112 aa4.71□□□□□ -1.66
VPS52-221ENST00000495755 RNASE7Q9H1E1 156 aaKnown RBP4.71□□□□□ -1.66
VPS52-221ENST00000495755 DPH3P1Q9H4G8 78 aa4.71□□□□□ -1.66
VPS52-221ENST00000495755 RPP21Q9H633 154 aaKnown RBP4.71□□□□□ -1.66
VPS52-221ENST00000495755 FAT3Q8TDW7 4589 aa4.7□□□□□ -1.66
VPS52-221ENST00000495755 hCG_2014768A0A024R1R8 64 aa4.7□□□□□ -1.66
VPS52-221ENST00000495755 TMEM250H0YL14 139 aa4.7□□□□□ -1.66
VPS52-221ENST00000495755 CRPP02741 224 aa4.7□□□□□ -1.66
VPS52-221ENST00000495755 NKX2-5P52952 324 aaPredicted RBP4.7□□□□□ -1.66
VPS52-221ENST00000495755 C14orf177Q52M58 125 aa4.7□□□□□ -1.66
VPS52-221ENST00000495755 LINC00269Q8N2A0 174 aa4.7□□□□□ -1.66
VPS52-221ENST00000495755 GTSF1Q8WW33 167 aa4.7□□□□□ -1.66
VPS52-221ENST00000495755 NIT2Q9NQR4 276 aa4.7□□□□□ -1.66
VPS52-221ENST00000495755 LRP1Q07954 4544 aaKnown RBP4.7□□□□□ -1.66
VPS52-221ENST00000495755 A0A1B0GUV1 79 aa4.69□□□□□ -1.66
VPS52-221ENST00000495755 USP17L23D6RBM5 183 aa4.69□□□□□ -1.66
VPS52-221ENST00000495755 TWIST1Q15672 202 aa4.69□□□□□ -1.66
VPS52-221ENST00000495755 FAM231DQ6ZW35 169 aa4.69□□□□□ -1.66
VPS52-221ENST00000495755 GATD1Q8NB37 220 aa4.69□□□□□ -1.66
VPS52-221ENST00000495755 C20orf203Q8NBC4 194 aa4.69□□□□□ -1.66
VPS52-221ENST00000495755 PGLYRP4Q96LB8 373 aa4.69□□□□□ -1.66
VPS52-221ENST00000495755 FLG2Q5D862 2391 aaPredicted RBP4.69□□□□□ -1.66
VPS52-221ENST00000495755 HMCN2Q8NDA2 5059 aa4.68□□□□□ -1.66
VPS52-221ENST00000495755 IGLV4-60A0A075B6I1 120 aa4.68□□□□□ -1.66
VPS52-221ENST00000495755 GATCO43716 136 aaKnown RBP4.68□□□□□ -1.66
VPS52-221ENST00000495755 NDUFS6O75380 124 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms