RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 SRSF9Q13242 221 aaKnown RBP eCLIP6.8□□□□□ -1.32
TM9SF4-207ENST00000495749 PLEKHB2Q96CS7 222 aa6.8□□□□□ -1.32
TM9SF4-207ENST00000495749 SIGMAR1Q99720 223 aa6.8□□□□□ -1.32
TM9SF4-207ENST00000495749 SPAG8Q99932 426 aaPredicted RBP6.8□□□□□ -1.32
TM9SF4-207ENST00000495749 SPXQ9BT56 116 aa6.8□□□□□ -1.32
TM9SF4-207ENST00000495749 JPT2Q9H910 190 aa6.8□□□□□ -1.32
TM9SF4-207ENST00000495749 GAGE12HA6NDE8 117 aa6.79□□□□□ -1.32
TM9SF4-207ENST00000495749 J3QR89 54 aa6.79□□□□□ -1.32
TM9SF4-207ENST00000495749 RNASE3P12724 160 aaKnown RBP6.79□□□□□ -1.32
TM9SF4-207ENST00000495749 INSL3P51460 131 aa6.79□□□□□ -1.32
TM9SF4-207ENST00000495749 MORN3Q6PF18 240 aaPredicted RBP6.79□□□□□ -1.32
TM9SF4-207ENST00000495749 MRPL16Q9NX20 251 aaKnown RBP6.79□□□□□ -1.32
TM9SF4-207ENST00000495749 VPREB3Q9UKI3 123 aa6.79□□□□□ -1.32
TM9SF4-207ENST00000495749 SOCS3O14543 225 aa6.79□□□□□ -1.32
TM9SF4-207ENST00000495749 A0A1B0GWB2 263 aa6.79□□□□□ -1.32
TM9SF4-207ENST00000495749 HOXD3P31249 432 aaPredicted RBP6.79□□□□□ -1.32
TM9SF4-207ENST00000495749 SMR3AQ99954 134 aa6.79□□□□□ -1.32
TM9SF4-207ENST00000495749 LINC01549A6NIU2 74 aa6.78□□□□□ -1.32
TM9SF4-207ENST00000495749 GATA3P23771 443 aa6.78□□□□□ -1.32
TM9SF4-207ENST00000495749 SPINK13Q1W4C9 94 aa6.78□□□□□ -1.32
TM9SF4-207ENST00000495749 PRO0461Q9UI25 63 aa6.78□□□□□ -1.32
TM9SF4-207ENST00000495749 NBEAL2Q6ZNJ1 2754 aa6.78□□□□□ -1.32
TM9SF4-207ENST00000495749 A0A087WWL8 130 aa6.78□□□□□ -1.32
TM9SF4-207ENST00000495749 FAM74A4Q5TZK3 123 aa6.78□□□□□ -1.32
TM9SF4-207ENST00000495749 TP53TG1Q9Y2A0 90 aa6.78□□□□□ -1.32
TM9SF4-207ENST00000495749 LOC107984156A0A0G2JMH3 177 aa6.77□□□□□ -1.33
TM9SF4-207ENST00000495749 C11orf86A6NJI1 115 aa6.77□□□□□ -1.33
TM9SF4-207ENST00000495749 F5H697 171 aa6.77□□□□□ -1.33
TM9SF4-207ENST00000495749 APOMO95445 188 aa6.77□□□□□ -1.33
TM9SF4-207ENST00000495749 CRYGDP07320 174 aa6.77□□□□□ -1.33
TM9SF4-207ENST00000495749 RPL39P62891 51 aaKnown RBP6.77□□□□□ -1.33
TM9SF4-207ENST00000495749 CFHR3Q02985 330 aa6.77□□□□□ -1.33
TM9SF4-207ENST00000495749 ARL17AQ8IVW1 177 aa6.77□□□□□ -1.33
TM9SF4-207ENST00000495749 ZNF702PQ9H963 129 aa6.77□□□□□ -1.33
TM9SF4-207ENST00000495749 KNCNA6PVL3 124 aa6.77□□□□□ -1.33
TM9SF4-207ENST00000495749 LINC01619G3V211 115 aa6.77□□□□□ -1.33
TM9SF4-207ENST00000495749 TSHBP01222 138 aa6.77□□□□□ -1.33
TM9SF4-207ENST00000495749 Q6YL49 198 aa6.77□□□□□ -1.33
TM9SF4-207ENST00000495749 CD7P09564 240 aa6.76□□□□□ -1.33
TM9SF4-207ENST00000495749 CRIP2P52943 208 aaPredicted RBP6.76□□□□□ -1.33
TM9SF4-207ENST00000495749 CR1P17927 2039 aa6.76□□□□□ -1.33
TM9SF4-207ENST00000495749 PDZD2O15018 2839 aa6.76□□□□□ -1.33
TM9SF4-207ENST00000495749 OTOGQ6ZRI0 2925 aa6.76□□□□□ -1.33
TM9SF4-207ENST00000495749 PPP1R17O96001 155 aa6.76□□□□□ -1.33
TM9SF4-207ENST00000495749 TCTEX1D4Q5JR98 221 aa6.76□□□□□ -1.33
TM9SF4-207ENST00000495749 FAM19A4Q96LR4 140 aa6.76□□□□□ -1.33
TM9SF4-207ENST00000495749 LINC00315P59091 139 aa6.76□□□□□ -1.33
TM9SF4-207ENST00000495749 TMEM170BQ5T4T1 132 aa6.76□□□□□ -1.33
TM9SF4-207ENST00000495749 FAM159AQ6UWV7 190 aa6.76□□□□□ -1.33
TM9SF4-207ENST00000495749 ZFP2Q6ZN57 461 aa6.76□□□□□ -1.33
TM9SF4-207ENST00000495749 YAE1D1Q9NRH1 226 aa6.76□□□□□ -1.33
TM9SF4-207ENST00000495749 KIF25-AS1Q9Y6Z4 181 aa6.76□□□□□ -1.33
TM9SF4-207ENST00000495749 IGLV4-69A0A075B6H9 119 aa6.75□□□□□ -1.33
TM9SF4-207ENST00000495749 MED14OSP0DP75 135 aa6.75□□□□□ -1.33
TM9SF4-207ENST00000495749 PSMB2P49721 201 aa6.75□□□□□ -1.33
TM9SF4-207ENST00000495749 SUMO4Q6EEV6 95 aa6.75□□□□□ -1.33
TM9SF4-207ENST00000495749 SS18L2Q9UHA2 77 aa6.75□□□□□ -1.33
TM9SF4-207ENST00000495749 IGHV3-73A0A0B4J1V6 119 aa6.75□□□□□ -1.33
TM9SF4-207ENST00000495749 TSPAN13O95857 204 aa6.75□□□□□ -1.33
TM9SF4-207ENST00000495749 KRTAP1-3Q8IUG1 177 aa6.75□□□□□ -1.33
TM9SF4-207ENST00000495749 ZNF418Q8TF45 676 aaPredicted RBP6.75□□□□□ -1.33
TM9SF4-207ENST00000495749 DCANP1Q8TF63 244 aa6.75□□□□□ -1.33
TM9SF4-207ENST00000495749 DLX4Q92988 240 aaPredicted RBP6.75□□□□□ -1.33
TM9SF4-207ENST00000495749 KIR2DL4Q99706 377 aa6.75□□□□□ -1.33
TM9SF4-207ENST00000495749 A0A1B0GV72 72 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 SDHAF1A6NFY7 115 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 IGIPA6NJ69 53 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 UBE2D1P51668 147 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 PMVKQ15126 192 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 APRG1Q8IVJ8 170 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 SPATA25Q9BR10 227 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 MDFICQ9P1T7 246 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 ZNF256Q9Y2P7 627 aaPredicted RBP6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 J3QLI3 93 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 SMCPP49901 116 aaPredicted RBP6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 POLR2KP53803 58 aaKnown RBP6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 DEFB131AP59861 70 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 HERVK_113P61574 105 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 TEP1Q99973 2627 aaKnown RBP6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 A0A0J9YY99 117 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 H3BUA1 57 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 VCYO14598 125 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 TSPEAR-AS2P59090 65 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 CFAP126Q5VTH2 177 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 PTH2Q96A98 100 aa6.74□□□□□ -1.33
TM9SF4-207ENST00000495749 AKAP9Q99996 3911 aa6.73□□□□□ -1.33
TM9SF4-207ENST00000495749 ATRQ13535 2644 aa6.73□□□□□ -1.33
TM9SF4-207ENST00000495749 IGHV3OR16-12A0A075B7B8 117 aa6.73□□□□□ -1.33
TM9SF4-207ENST00000495749 KLLNB2CW77 178 aa6.73□□□□□ -1.33
TM9SF4-207ENST00000495749 OPRPNQ99935 248 aaPredicted RBP6.73□□□□□ -1.33
TM9SF4-207ENST00000495749 VCX2Q9H322 139 aa6.73□□□□□ -1.33
TM9SF4-207ENST00000495749 NXPH4O95158 308 aa6.73□□□□□ -1.33
TM9SF4-207ENST00000495749 FOXI1Q12951 378 aa6.73□□□□□ -1.33
TM9SF4-207ENST00000495749 ZNRF2Q8NHG8 242 aa6.73□□□□□ -1.33
TM9SF4-207ENST00000495749 ESM1Q9NQ30 184 aa6.73□□□□□ -1.33
TM9SF4-207ENST00000495749 SNRPD3P62318 126 aaKnown RBP6.72□□□□□ -1.33
TM9SF4-207ENST00000495749 PAPPA-AS1Q5QFB9 102 aa6.72□□□□□ -1.33
TM9SF4-207ENST00000495749 NFE4Q86UQ8 179 aa6.72□□□□□ -1.33
TM9SF4-207ENST00000495749 NDUFA11Q86Y39 141 aa6.72□□□□□ -1.33
TM9SF4-207ENST00000495749 POM121L12Q8N7R1 296 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms