RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 WFDC1Q9HC57 220 aa8.41□□□□□ -1.06
COL1A1-209ENST00000495677 LPAP08519 4548 aa8.41□□□□□ -1.06
COL1A1-209ENST00000495677 TRAV34A0A0B4J273 112 aa8.4□□□□□ -1.06
COL1A1-209ENST00000495677 GRIFINA4D1Z8 144 aa8.4□□□□□ -1.06
COL1A1-209ENST00000495677 SMLR1H3BR10 107 aa8.4□□□□□ -1.06
COL1A1-209ENST00000495677 CXorf1O96002 111 aa8.4□□□□□ -1.06
COL1A1-209ENST00000495677 REG3AQ06141 175 aa8.4□□□□□ -1.06
COL1A1-209ENST00000495677 SRSF9Q13242 221 aaKnown RBP eCLIP8.4□□□□□ -1.06
COL1A1-209ENST00000495677 Q5BKY6 102 aa8.4□□□□□ -1.06
COL1A1-209ENST00000495677 ZFP30Q9Y2G7 519 aa8.4□□□□□ -1.06
COL1A1-209ENST00000495677 hCG_2014768A0A024R1R8 64 aa8.39□□□□□ -1.07
COL1A1-209ENST00000495677 ZNF674Q2M3X9 581 aa8.39□□□□□ -1.07
COL1A1-209ENST00000495677 LINC01559Q495D7 138 aa8.39□□□□□ -1.07
COL1A1-209ENST00000495677 CLPSL2Q6UWE3 100 aa8.39□□□□□ -1.07
COL1A1-209ENST00000495677 TRBV25-1A0A075B6N4 114 aa8.38□□□□□ -1.07
COL1A1-209ENST00000495677 TRBV6-1A0A0K0K1D8 114 aa8.38□□□□□ -1.07
COL1A1-209ENST00000495677 A0A1B0GUV1 79 aa8.38□□□□□ -1.07
COL1A1-209ENST00000495677 M0R036 132 aa8.38□□□□□ -1.07
COL1A1-209ENST00000495677 SH2D1AO60880 128 aa8.38□□□□□ -1.07
COL1A1-209ENST00000495677 NDUFS6O75380 124 aaKnown RBP8.38□□□□□ -1.07
COL1A1-209ENST00000495677 MBP02144 154 aa8.38□□□□□ -1.07
COL1A1-209ENST00000495677 SERF2P84101 59 aa8.38□□□□□ -1.07
COL1A1-209ENST00000495677 IQCJQ1A5X6 159 aa8.38□□□□□ -1.07
COL1A1-209ENST00000495677 FAM162BQ5T6X4 162 aa8.38□□□□□ -1.07
COL1A1-209ENST00000495677 GTSF1Q8WW33 167 aa8.38□□□□□ -1.07
COL1A1-209ENST00000495677 PSMG3Q9BT73 122 aaPredicted RBP8.38□□□□□ -1.07
COL1A1-209ENST00000495677 IGLV10-54A0A075B6I4 117 aa8.37□□□□□ -1.07
COL1A1-209ENST00000495677 COX6A2Q02221 97 aa8.37□□□□□ -1.07
COL1A1-209ENST00000495677 GAGE6Q13070 117 aa8.37□□□□□ -1.07
COL1A1-209ENST00000495677 Q86TA4 180 aa8.37□□□□□ -1.07
COL1A1-209ENST00000495677 C20orf203Q8NBC4 194 aa8.37□□□□□ -1.07
COL1A1-209ENST00000495677 INO80EQ8NBZ0 244 aaPredicted RBP8.37□□□□□ -1.07
COL1A1-209ENST00000495677 HIST1H2BAQ96A08 127 aa8.37□□□□□ -1.07
COL1A1-209ENST00000495677 DERL1Q9BUN8 251 aa8.37□□□□□ -1.07
COL1A1-209ENST00000495677 NKX6-2Q9C056 277 aaPredicted RBP8.37□□□□□ -1.07
COL1A1-209ENST00000495677 ARPC5O15511 151 aa8.36□□□□□ -1.07
COL1A1-209ENST00000495677 RPS10P46783 165 aaKnown RBP8.36□□□□□ -1.07
COL1A1-209ENST00000495677 ZNF56Q15929 161 aa8.36□□□□□ -1.07
COL1A1-209ENST00000495677 PEX7O00628 323 aa8.35□□□□□ -1.07
COL1A1-209ENST00000495677 ATP6V0CP27449 155 aa8.35□□□□□ -1.07
COL1A1-209ENST00000495677 MAJINQ3KP22 176 aa8.35□□□□□ -1.07
COL1A1-209ENST00000495677 STPG4Q8N801 248 aa8.35□□□□□ -1.07
COL1A1-209ENST00000495677 PRSS3P2Q8NHM4 247 aa8.35□□□□□ -1.07
COL1A1-209ENST00000495677 AQP10Q96PS8 301 aa8.35□□□□□ -1.07
COL1A1-209ENST00000495677 TNFSF18Q9UNG2 199 aa8.35□□□□□ -1.07
COL1A1-209ENST00000495677 IGHV1-24A0A0C4DH33 117 aa8.34□□□□□ -1.07
COL1A1-209ENST00000495677 IFNA7P01567 189 aa8.34□□□□□ -1.07
COL1A1-209ENST00000495677 CXCL1P09341 107 aa8.34□□□□□ -1.07
COL1A1-209ENST00000495677 CFAP161Q6P656 301 aa8.34□□□□□ -1.07
COL1A1-209ENST00000495677 SSBP4Q9BWG4 385 aaPredicted RBP8.34□□□□□ -1.07
COL1A1-209ENST00000495677 ACTR3CQ9C0K3 210 aaPredicted RBP8.34□□□□□ -1.07
COL1A1-209ENST00000495677 G3V3Q6 166 aa8.33□□□□□ -1.08
COL1A1-209ENST00000495677 SNAI2O43623 268 aa8.33□□□□□ -1.08
COL1A1-209ENST00000495677 C15orf56Q8N910 161 aa8.33□□□□□ -1.08
COL1A1-209ENST00000495677 FMC1Q96HJ9 113 aa8.33□□□□□ -1.08
COL1A1-209ENST00000495677 ZNF471Q9BX82 626 aaPredicted RBP8.33□□□□□ -1.08
COL1A1-209ENST00000495677 IGLV4-60A0A075B6I1 120 aa8.32□□□□□ -1.08
COL1A1-209ENST00000495677 TMSB15BA0A087X1C1 80 aa8.32□□□□□ -1.08
COL1A1-209ENST00000495677 BORCS7-ASMTA0A0B4J1R7 106 aa8.32□□□□□ -1.08
COL1A1-209ENST00000495677 MUC21A0A0G2JKD1 596 aa8.32□□□□□ -1.08
COL1A1-209ENST00000495677 RPL7L1Q6DKI1 246 aaKnown RBP8.32□□□□□ -1.08
COL1A1-209ENST00000495677 Q6ZRP5 223 aa8.32□□□□□ -1.08
COL1A1-209ENST00000495677 OR10AG1Q8NH19 301 aa8.32□□□□□ -1.08
COL1A1-209ENST00000495677 LINC00474Q9P2X8 69 aa8.32□□□□□ -1.08
COL1A1-209ENST00000495677 FAM74A7A6NL05 159 aa8.31□□□□□ -1.08
COL1A1-209ENST00000495677 F5H697 171 aa8.31□□□□□ -1.08
COL1A1-209ENST00000495677 LTAP01374 205 aa8.31□□□□□ -1.08
COL1A1-209ENST00000495677 OR5AL1P0C617 328 aa8.31□□□□□ -1.08
COL1A1-209ENST00000495677 LYPD6BQ8NI32 183 aa8.31□□□□□ -1.08
COL1A1-209ENST00000495677 GFRA4Q9GZZ7 299 aa8.31□□□□□ -1.08
COL1A1-209ENST00000495677 IGKV2-24A0A0C4DH68 120 aa8.3□□□□□ -1.08
COL1A1-209ENST00000495677 FAM231BA6NCW3 169 aa8.29□□□□□ -1.08
COL1A1-209ENST00000495677 H7C1H1 209 aa8.29□□□□□ -1.08
COL1A1-209ENST00000495677 RAB5CP51148 216 aa8.29□□□□□ -1.08
COL1A1-209ENST00000495677 UBE2G1P62253 170 aa8.29□□□□□ -1.08
COL1A1-209ENST00000495677 TCEAL7Q9BRU2 100 aa8.29□□□□□ -1.08
COL1A1-209ENST00000495677 MUC2Q02817 5179 aa8.28□□□□□ -1.08
COL1A1-209ENST00000495677 A0A096LNI7 61 aa8.28□□□□□ -1.08
COL1A1-209ENST00000495677 A0A0U1RQV1 116 aa8.28□□□□□ -1.08
COL1A1-209ENST00000495677 CTXND1A0A1B0GTU2 59 aa8.28□□□□□ -1.08
COL1A1-209ENST00000495677 M0QY20 66 aa8.28□□□□□ -1.08
COL1A1-209ENST00000495677 PFDN1O60925 122 aa8.28□□□□□ -1.08
COL1A1-209ENST00000495677 UBE2G2P60604 165 aa8.28□□□□□ -1.08
COL1A1-209ENST00000495677 ZNF726P1Q15940 193 aa8.28□□□□□ -1.08
COL1A1-209ENST00000495677 SPANXN1Q5VSR9 72 aa8.28□□□□□ -1.08
COL1A1-209ENST00000495677 Q6ZNX1 250 aa8.28□□□□□ -1.08
COL1A1-209ENST00000495677 PGLYRP4Q96LB8 373 aa8.28□□□□□ -1.08
COL1A1-209ENST00000495677 TMEM243Q9BU79 118 aa8.28□□□□□ -1.08
COL1A1-209ENST00000495677 PKIGQ9Y2B9 76 aa8.28□□□□□ -1.08
COL1A1-209ENST00000495677 GVQW2A0A096LPI5 108 aaPredicted RBP8.27□□□□□ -1.09
COL1A1-209ENST00000495677 KRTAP9-6A0A140TA67 174 aa8.27□□□□□ -1.09
COL1A1-209ENST00000495677 KANTRA0A1W2PQU2 76 aa8.27□□□□□ -1.09
COL1A1-209ENST00000495677 SMIM17P0DL12 118 aa8.27□□□□□ -1.09
COL1A1-209ENST00000495677 FHITP49789 147 aa8.27□□□□□ -1.09
COL1A1-209ENST00000495677 ZNF664Q8N3J9 261 aa8.27□□□□□ -1.09
COL1A1-209ENST00000495677 GAGE12HA6NDE8 117 aa8.26□□□□□ -1.09
COL1A1-209ENST00000495677 BCL2L11O43521 198 aa8.26□□□□□ -1.09
COL1A1-209ENST00000495677 AKR1C8PQ5T2L2 129 aa8.26□□□□□ -1.09
COL1A1-209ENST00000495677 AKAP14Q86UN6 197 aa8.26□□□□□ -1.09
COL1A1-209ENST00000495677 PSORS1C2Q9UIG4 136 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms