RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 LGALS3P17931 250 aaKnown RBP11□□□□□ -0.65
UBXN11-215ENST00000494942 NDUFA11Q86Y39 141 aa11□□□□□ -0.65
UBXN11-215ENST00000494942 NBPF19A0A087WUL8 3843 aa11□□□□□ -0.65
UBXN11-215ENST00000494942 IGHV3-30P01768 117 aa11□□□□□ -0.65
UBXN11-215ENST00000494942 IGHV3-30-5P0DP03 117 aa11□□□□□ -0.65
UBXN11-215ENST00000494942 TSPEAR-AS2P59090 65 aa11□□□□□ -0.65
UBXN11-215ENST00000494942 C20orf203Q8NBC4 194 aa11□□□□□ -0.65
UBXN11-215ENST00000494942 SIGMAR1Q99720 223 aa11□□□□□ -0.65
UBXN11-215ENST00000494942 SPAG8Q99932 426 aaPredicted RBP11□□□□□ -0.65
UBXN11-215ENST00000494942 GAGE12HA6NDE8 117 aa10.99□□□□□ -0.65
UBXN11-215ENST00000494942 UBE2D3P61077 147 aa10.99□□□□□ -0.65
UBXN11-215ENST00000494942 UBE2D2P62837 147 aa10.99□□□□□ -0.65
UBXN11-215ENST00000494942 LEPROTO15243 131 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 APOMO95445 188 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 P0DMU3 169 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 FAM231AP0DMU4 169 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 FAM231CP0DMU5 169 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 SCGB1A1P11684 91 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 CFAP126Q5VTH2 177 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 ATP6V0E2Q8NHE4 81 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 UBE2E2Q96LR5 201 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 AMELXQ99217 191 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 TSSC4Q9Y5U2 329 aaPredicted RBP10.98□□□□□ -0.65
UBXN11-215ENST00000494942 CELSR2Q9HCU4 2923 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 LOC107984156A0A0G2JMH3 177 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 ARL17AQ8IVW1 177 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 SPATA25Q9BR10 227 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 EDA2RQ9HAV5 297 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 VPS13CQ709C8 3753 aa10.98□□□□□ -0.65
UBXN11-215ENST00000494942 TMEM223A0PJW6 202 aa10.97□□□□□ -0.65
UBXN11-215ENST00000494942 MTURNQ8N3F0 131 aa10.97□□□□□ -0.65
UBXN11-215ENST00000494942 VPREB3Q9UKI3 123 aa10.97□□□□□ -0.65
UBXN11-215ENST00000494942 PTPN13Q12923 2485 aa10.97□□□□□ -0.65
UBXN11-215ENST00000494942 HOXD3P31249 432 aaPredicted RBP10.97□□□□□ -0.65
UBXN11-215ENST00000494942 CENPEQ02224 2701 aa10.97□□□□□ -0.65
UBXN11-215ENST00000494942 TRBV20-1A0A075B6N2 111 aa10.96□□□□□ -0.65
UBXN11-215ENST00000494942 CFC1BP0CG36 223 aa10.96□□□□□ -0.65
UBXN11-215ENST00000494942 CFC1P0CG37 223 aa10.96□□□□□ -0.65
UBXN11-215ENST00000494942 PSMB2P49721 201 aa10.96□□□□□ -0.65
UBXN11-215ENST00000494942 VCX2Q9H322 139 aa10.96□□□□□ -0.65
UBXN11-215ENST00000494942 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.96□□□□□ -0.662e-6■■■■□ 21.5
UBXN11-215ENST00000494942 C10orf126Q8N4M7 172 aa10.96□□□□□ -0.66
UBXN11-215ENST00000494942 OPRPNQ99935 248 aaPredicted RBP10.96□□□□□ -0.66
UBXN11-215ENST00000494942 RHODO00212 210 aa10.95□□□□□ -0.66
UBXN11-215ENST00000494942 AZU1P20160 251 aa10.95□□□□□ -0.66
UBXN11-215ENST00000494942 C1QTNF4Q9BXJ3 329 aa10.95□□□□□ -0.66
UBXN11-215ENST00000494942 IGLV4-3A0A075B6K6 122 aa10.95□□□□□ -0.66
UBXN11-215ENST00000494942 TGFAP01135 160 aa10.95□□□□□ -0.66
UBXN11-215ENST00000494942 GTSF1LQ9H1H1 148 aa10.95□□□□□ -0.66
UBXN11-215ENST00000494942 PRO1854Q9UHT4 67 aa10.95□□□□□ -0.66
UBXN11-215ENST00000494942 PYGO1Q9Y3Y4 419 aa10.95□□□□□ -0.66
UBXN11-215ENST00000494942 CSMD2Q7Z408 3487 aa10.94□□□□□ -0.66
UBXN11-215ENST00000494942 A0A096LNT2 108 aa10.94□□□□□ -0.66
UBXN11-215ENST00000494942 ZNF22P17026 224 aaPredicted RBP10.94□□□□□ -0.66
UBXN11-215ENST00000494942 CRYBA4P53673 196 aa10.94□□□□□ -0.66
UBXN11-215ENST00000494942 DUX5Q96PT3 197 aa10.94□□□□□ -0.66
UBXN11-215ENST00000494942 FOXI1Q12951 378 aa10.93□□□□□ -0.66
UBXN11-215ENST00000494942 TCTEX1D4Q5JR98 221 aa10.93□□□□□ -0.66
UBXN11-215ENST00000494942 Q6YL49 198 aa10.93□□□□□ -0.66
UBXN11-215ENST00000494942 ZNF702PQ9H963 129 aa10.93□□□□□ -0.66
UBXN11-215ENST00000494942 SMCPP49901 116 aaPredicted RBP10.93□□□□□ -0.66
UBXN11-215ENST00000494942 PIK3CD-AS1Q5SR53 167 aa10.93□□□□□ -0.66
UBXN11-215ENST00000494942 NRGNQ92686 78 aa10.93□□□□□ -0.66
UBXN11-215ENST00000494942 A8MTW9 85 aa10.92□□□□□ -0.66
UBXN11-215ENST00000494942 SFTA2Q6UW10 78 aa10.92□□□□□ -0.66
UBXN11-215ENST00000494942 TRAV2A0A0B4J234 112 aa10.91□□□□□ -0.66
UBXN11-215ENST00000494942 A0A0J9YXV3 536 aa10.91□□□□□ -0.66
UBXN11-215ENST00000494942 A8MWV9 139 aa10.91□□□□□ -0.66
UBXN11-215ENST00000494942 RBMY1A1P0DJD3 496 aaKnown RBP10.91□□□□□ -0.66
UBXN11-215ENST00000494942 RBMY1CP0DJD4 496 aa10.91□□□□□ -0.66
UBXN11-215ENST00000494942 INSL3P51460 131 aa10.91□□□□□ -0.66
UBXN11-215ENST00000494942 RBMY1FQ15415 496 aaKnown RBP10.91□□□□□ -0.66
UBXN11-215ENST00000494942 Q5PR19 223 aa10.91□□□□□ -0.66
UBXN11-215ENST00000494942 HIST2H2BCQ6DN03 193 aa10.91□□□□□ -0.66
UBXN11-215ENST00000494942 HECTD1Q9ULT8 2610 aa10.91□□□□□ -0.66
UBXN11-215ENST00000494942 FBN2P35556 2912 aa10.91□□□□□ -0.66
UBXN11-215ENST00000494942 FSHBP01225 129 aa10.91□□□□□ -0.66
UBXN11-215ENST00000494942 TNFRSF18Q9Y5U5 241 aa10.91□□□□□ -0.66
UBXN11-215ENST00000494942 KNCNA6PVL3 124 aa10.9□□□□□ -0.66
UBXN11-215ENST00000494942 TCL1BO95988 128 aa10.9□□□□□ -0.66
UBXN11-215ENST00000494942 DEFB131AP59861 70 aa10.9□□□□□ -0.66
UBXN11-215ENST00000494942 SMAGPQ0VAQ4 97 aa10.9□□□□□ -0.66
UBXN11-215ENST00000494942 ZNF418Q8TF45 676 aaPredicted RBP10.9□□□□□ -0.66
UBXN11-215ENST00000494942 A0A0B4J2C4 111 aa10.9□□□□□ -0.67
UBXN11-215ENST00000494942 A4D1N5 150 aa10.9□□□□□ -0.67
UBXN11-215ENST00000494942 H3BMM0 161 aa10.9□□□□□ -0.67
UBXN11-215ENST00000494942 M0R2P5 195 aa10.9□□□□□ -0.67
UBXN11-215ENST00000494942 SCGB1C2P0DMR2 95 aa10.9□□□□□ -0.67
UBXN11-215ENST00000494942 CD28P10747 220 aa10.9□□□□□ -0.67
UBXN11-215ENST00000494942 PTH2Q96A98 100 aa10.9□□□□□ -0.67
UBXN11-215ENST00000494942 SPG11Q96JI7 2443 aa10.89□□□□□ -0.67
UBXN11-215ENST00000494942 CSPG4Q6UVK1 2322 aa10.89□□□□□ -0.67
UBXN11-215ENST00000494942 HTN1P15515 57 aa10.89□□□□□ -0.67
UBXN11-215ENST00000494942 MRPS36P82909 103 aaKnown RBP10.89□□□□□ -0.67
UBXN11-215ENST00000494942 SBSPONQ8IVN8 264 aa10.89□□□□□ -0.67
UBXN11-215ENST00000494942 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.89□□□□□ -0.67
UBXN11-215ENST00000494942 TEN1Q86WV5 123 aa10.89□□□□□ -0.67
UBXN11-215ENST00000494942 DUX3Q96PT4 197 aa10.89□□□□□ -0.67
UBXN11-215ENST00000494942 BAHCC1Q9P281 2608 aa10.88□□□□□ -0.67
UBXN11-215ENST00000494942 ZNF415Q09FC8 603 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms