RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 Q6ZSN1 163 aa7.6□□□□□ -1.19
SAMM50-206ENST00000494795 MRPL35Q9NZE8 188 aaKnown RBP7.6□□□□□ -1.19
SAMM50-206ENST00000494795 HHLA3Q9XRX5 114 aa7.6□□□□□ -1.19
SAMM50-206ENST00000494795 HLA-DRB4X5D2U9 266 aa7.6□□□□□ -1.19
SAMM50-206ENST00000494795 A0A1B0GV72 72 aa7.6□□□□□ -1.19
SAMM50-206ENST00000494795 FHL3Q13643 280 aa7.6□□□□□ -1.19
SAMM50-206ENST00000494795 GTSCR1Q86UQ5 136 aa7.6□□□□□ -1.19
SAMM50-206ENST00000494795 TMEM86BQ8N661 226 aa7.6□□□□□ -1.19
SAMM50-206ENST00000494795 INAFM1C9JVW0 142 aa7.59□□□□□ -1.19
SAMM50-206ENST00000494795 K7EMI3 77 aa7.59□□□□□ -1.19
SAMM50-206ENST00000494795 K7EP13 123 aa7.59□□□□□ -1.19
SAMM50-206ENST00000494795 NMUP48645 174 aa7.59□□□□□ -1.19
SAMM50-206ENST00000494795 LGALS9BQ3B8N2 356 aa7.59□□□□□ -1.19
SAMM50-206ENST00000494795 LGALS9CQ6DKI2 356 aa7.59□□□□□ -1.19
SAMM50-206ENST00000494795 MRAP2Q96G30 205 aa7.59□□□□□ -1.19
SAMM50-206ENST00000494795 OPRPNQ99935 248 aaPredicted RBP7.59□□□□□ -1.19
SAMM50-206ENST00000494795 ST20Q9HBF5 79 aa7.59□□□□□ -1.19
SAMM50-206ENST00000494795 TMEM160Q9NX00 188 aa7.59□□□□□ -1.19
SAMM50-206ENST00000494795 PEMTQ9UBM1 199 aa7.59□□□□□ -1.19
SAMM50-206ENST00000494795 DUSP14O95147 198 aaKnown RBP7.59□□□□□ -1.19
SAMM50-206ENST00000494795 RNASE1P07998 156 aaKnown RBP7.59□□□□□ -1.19
SAMM50-206ENST00000494795 UBE2V1Q13404 147 aa7.59□□□□□ -1.19
SAMM50-206ENST00000494795 ZNF56Q15929 161 aa7.59□□□□□ -1.19
SAMM50-206ENST00000494795 OCIAD2Q56VL3 154 aa7.59□□□□□ -1.19
SAMM50-206ENST00000494795 SLC25A34Q6PIV7 304 aa7.59□□□□□ -1.19
SAMM50-206ENST00000494795 CITED1Q99966 193 aa7.58□□□□□ -1.2
SAMM50-206ENST00000494795 TSHBP01222 138 aa7.58□□□□□ -1.2
SAMM50-206ENST00000494795 MED14OSP0DP75 135 aa7.57□□□□□ -1.2
SAMM50-206ENST00000494795 SAP30O75446 220 aa7.57□□□□□ -1.2
SAMM50-206ENST00000494795 COX8AP10176 69 aa7.57□□□□□ -1.2
SAMM50-206ENST00000494795 SAMD13Q5VXD3 122 aa7.57□□□□□ -1.2
SAMM50-206ENST00000494795 SHISA2Q6UWI4 295 aa7.57□□□□□ -1.2
SAMM50-206ENST00000494795 C2orf66Q6UXQ4 117 aa7.57□□□□□ -1.2
SAMM50-206ENST00000494795 ODF3Q96PU9 254 aa7.57□□□□□ -1.2
SAMM50-206ENST00000494795 MRPL16Q9NX20 251 aaKnown RBP7.57□□□□□ -1.2
SAMM50-206ENST00000494795 SDHAF1A6NFY7 115 aa7.57□□□□□ -1.2
SAMM50-206ENST00000494795 M0QY20 66 aa7.57□□□□□ -1.2
SAMM50-206ENST00000494795 HILS1P60008 231 aa7.57□□□□□ -1.2
SAMM50-206ENST00000494795 SPAG8Q99932 426 aaPredicted RBP7.57□□□□□ -1.2
SAMM50-206ENST00000494795 MRPS16Q9Y3D3 137 aaKnown RBP7.57□□□□□ -1.2
SAMM50-206ENST00000494795 DEFB125Q8N687 156 aa7.56□□□□□ -1.2
SAMM50-206ENST00000494795 POM121L12Q8N7R1 296 aa7.56□□□□□ -1.2
SAMM50-206ENST00000494795 CST9LQ9H4G1 147 aa7.56□□□□□ -1.2
SAMM50-206ENST00000494795 POLR2KP53803 58 aaKnown RBP7.56□□□□□ -1.2
SAMM50-206ENST00000494795 MAPKAPK5-AS1Q8N8E1 139 aa7.56□□□□□ -1.2
SAMM50-206ENST00000494795 LINC01587Q99440 93 aa7.56□□□□□ -1.2
SAMM50-206ENST00000494795 SCGB3A1Q96QR1 104 aa7.56□□□□□ -1.2
SAMM50-206ENST00000494795 TSSC4Q9Y5U2 329 aaPredicted RBP7.56□□□□□ -1.2
SAMM50-206ENST00000494795 F8P00451 2351 aa7.55□□□□□ -1.2
SAMM50-206ENST00000494795 C1orf158Q8N1D5 194 aa7.55□□□□□ -1.2
SAMM50-206ENST00000494795 TOMM6Q96B49 74 aa7.55□□□□□ -1.2
SAMM50-206ENST00000494795 TP53TG1Q9Y2A0 90 aa7.55□□□□□ -1.2
SAMM50-206ENST00000494795 BVES-AS1Q5T3Y7 98 aa7.55□□□□□ -1.2
SAMM50-206ENST00000494795 ZFP2Q6ZN57 461 aa7.55□□□□□ -1.2
SAMM50-206ENST00000494795 C11orf72Q8NBR9 251 aa7.55□□□□□ -1.2
SAMM50-206ENST00000494795 BAALCQ8WXS3 180 aa7.55□□□□□ -1.2
SAMM50-206ENST00000494795 C20orf78Q9BR46 151 aa7.55□□□□□ -1.2
SAMM50-206ENST00000494795 IGKCP01834 107 aa7.54□□□□□ -1.2
SAMM50-206ENST00000494795 GIG44P09565 113 aaPredicted RBP7.54□□□□□ -1.2
SAMM50-206ENST00000494795 CEMP1Q6PRD7 247 aaPredicted RBP7.54□□□□□ -1.2
SAMM50-206ENST00000494795 A8MTW9 85 aa7.54□□□□□ -1.2
SAMM50-206ENST00000494795 RPL35AP18077 110 aaKnown RBP7.54□□□□□ -1.2
SAMM50-206ENST00000494795 NAA38Q9BRA0 125 aaKnown RBP7.54□□□□□ -1.2
SAMM50-206ENST00000494795 PRSS29PA6NIE9 313 aa7.54□□□□□ -1.2
SAMM50-206ENST00000494795 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.54□□□□□ -1.2
SAMM50-206ENST00000494795 CRYBA4P53673 196 aa7.54□□□□□ -1.2
SAMM50-206ENST00000494795 ORAOV1Q8WV07 137 aa7.54□□□□□ -1.2
SAMM50-206ENST00000494795 FBN1P35555 2871 aaKnown RBP7.53□□□□□ -1.2
SAMM50-206ENST00000494795 TRAV26-1A0A087WT03 109 aa7.53□□□□□ -1.2
SAMM50-206ENST00000494795 IGHV3-38A0A0C4DH36 116 aa7.53□□□□□ -1.2
SAMM50-206ENST00000494795 RNASE13Q5GAN3 156 aaKnown RBP7.53□□□□□ -1.2
SAMM50-206ENST00000494795 BOD1L2Q8IYS8 172 aa7.53□□□□□ -1.2
SAMM50-206ENST00000494795 NEXN-AS1Q8NBZ9 246 aa7.53□□□□□ -1.2
SAMM50-206ENST00000494795 C1orf43Q9BWL3 253 aa7.53□□□□□ -1.2
SAMM50-206ENST00000494795 C16orf95Q9H693 158 aa7.53□□□□□ -1.2
SAMM50-206ENST00000494795 A0A087WX48 190 aa7.53□□□□□ -1.2
SAMM50-206ENST00000494795 TRAV8-6A0A0B4J262 113 aa7.53□□□□□ -1.2
SAMM50-206ENST00000494795 ZNF418Q8TF45 676 aaPredicted RBP7.53□□□□□ -1.2
SAMM50-206ENST00000494795 IGHV3-53P01767 116 aa7.52□□□□□ -1.21
SAMM50-206ENST00000494795 STHQ8IWL8 128 aa7.52□□□□□ -1.21
SAMM50-206ENST00000494795 ANK2Q01484 3957 aa7.52□□□□□ -1.21
SAMM50-206ENST00000494795 OR11H12B2RN74 326 aa7.52□□□□□ -1.21
SAMM50-206ENST00000494795 DPM2O94777 84 aa7.52□□□□□ -1.21
SAMM50-206ENST00000494795 ORMDL2Q53FV1 153 aa7.52□□□□□ -1.21
SAMM50-206ENST00000494795 UFSP1Q6NVU6 142 aa7.52□□□□□ -1.21
SAMM50-206ENST00000494795 C19orf73Q9NVV2 129 aa7.52□□□□□ -1.21
SAMM50-206ENST00000494795 IGIPA6NJ69 53 aa7.51□□□□□ -1.21
SAMM50-206ENST00000494795 ATP5LO75964 103 aa7.51□□□□□ -1.21
SAMM50-206ENST00000494795 CFAP126Q5VTH2 177 aa7.51□□□□□ -1.21
SAMM50-206ENST00000494795 PKD1L1Q8TDX9 2849 aa7.51□□□□□ -1.21
SAMM50-206ENST00000494795 TRPT1Q86TN4 253 aaKnown RBP7.51□□□□□ -1.21
SAMM50-206ENST00000494795 SYT8Q8NBV8 401 aa7.51□□□□□ -1.21
SAMM50-206ENST00000494795 PHLDA1Q8WV24 401 aaPredicted RBP7.51□□□□□ -1.21
SAMM50-206ENST00000494795 TRGV11A0A075B6L2 103 aa7.5□□□□□ -1.21
SAMM50-206ENST00000494795 TRBV27A0A0K0K1C4 114 aa7.5□□□□□ -1.21
SAMM50-206ENST00000494795 TAX1BP3O14907 124 aa7.5□□□□□ -1.21
SAMM50-206ENST00000494795 SMAGPQ0VAQ4 97 aa7.5□□□□□ -1.21
SAMM50-206ENST00000494795 FAM104AQ969W3 186 aa7.5□□□□□ -1.21
SAMM50-206ENST00000494795 ZNF479Q96JC4 524 aa7.5□□□□□ -1.21
SAMM50-206ENST00000494795 IGLV4-69A0A075B6H9 119 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms