RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 ATP5EP56381 51 aaPredicted RBP2.05□□□□□ -2.08
MDC1-208ENST00000494654 SYNJ2BPP57105 145 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 ZNF415Q09FC8 603 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 KLRB1Q12918 225 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 MIAQ16674 131 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 NSUN5P1Q3KNT7 163 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 ZNF876PQ49A33 203 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 LCE1DQ5T752 114 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 ATP5EP2Q5VTU8 51 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 ZNF575Q86XF7 245 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 TMEM61Q8N0U2 210 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 ZNF491Q8N8L2 437 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 Q8TAT8 98 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 DCANP1Q8TF63 244 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 COPS9Q8WXC6 57 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 CFHR4Q92496 578 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 LEAP2Q969E1 77 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 FAM19A4Q96LR4 140 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 LINC00477Q96M19 166 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 C17orf77Q96MU5 243 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 LITAFQ99732 161 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 TIMM21Q9BVV7 248 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 DKK4Q9UBT3 224 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 TP53TG1Q9Y2A0 90 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 V9GYY9 64 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 TEX15Q9BXT5 2789 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 F5P12259 2224 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 CFAP46Q8IYW2 2715 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 TRAV12-2A0A075B6T6 113 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 TRAV26-2A0A0B4J265 109 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 IGKV3D-20A0A0C4DH25 116 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 IGHV3-64DA0A0J9YX35 117 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 A0A0J9YXY3 114 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 PINLYPA6NC86 204 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 IGIPA6NJ69 53 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 I3L3M4 83 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 K7EIM0 57 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 TSHBP01222 138 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 LHBP01229 141 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 IGLV1-44P01699 117 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 IGHV3-48P01763 117 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 IGHV1-2P23083 117 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 FOLR3P41439 243 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 UBE2E1P51965 193 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 SEC61GP60059 68 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 MRPS36P82909 103 aaKnown RBP2.04□□□□□ -2.08
MDC1-208ENST00000494654 ACACAQ13085 2346 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 RHOHQ15669 191 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 BEAN1Q3B7T3 259 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 C1orf195Q5TG92 126 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 SPANXN1Q5VSR9 72 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 CNTRLQ7Z7A1 2325 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 MUSTN1Q8IVN3 82 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 RNF152Q8N8N0 203 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 ZNRF1Q8ND25 227 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 KLHL30-AS1Q8NEE0 82 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 CLEC2BQ92478 149 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 VSIG2Q96IQ7 327 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 C16orf92Q96LL3 132 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 OVOL2Q9BRP0 275 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 C1orf43Q9BWL3 253 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 KLK15Q9H2R5 256 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 CTSZQ9UBR2 303 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 LENEPQ9Y5L5 61 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 SLC25A15Q9Y619 301 aa2.04□□□□□ -2.08
MDC1-208ENST00000494654 CADP27708 2225 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 ABCA12Q86UK0 2595 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 IGHV3OR16-10A0A075B7F0 116 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 TRAV8-3A0A0A6YYJ7 113 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 TRGV5A0A0B4J1U4 118 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 TRAV41A0A0B4J266 112 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 IGHV1-18A0A0C4DH31 117 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 IGHV5-10-1A0A0J9YXX1 117 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 TRBV6-5A0A0K0K1A5 114 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 USP17L23D6RBM5 183 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 TMEM178BH3BS89 294 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 H7C2G1 150 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 BCE1O60756 84 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 DNAL4O96015 105 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 RNASE4P34096 147 aaKnown RBP2.03□□□□□ -2.08
MDC1-208ENST00000494654 DAZ2Q13117 558 aaKnown RBP2.03□□□□□ -2.08
MDC1-208ENST00000494654 FHL2Q14192 279 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 IL11RAQ14626 422 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 KRTAP19-4Q3LI73 84 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 C3orf36Q3SXR2 165 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 PMS2CLQ68D20 193 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 HCP5Q6MZN7 132 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 Q6ZT83 130 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 LINC00336Q6ZUF6 198 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 DAZ4Q86SG3 579 aaKnown RBP2.03□□□□□ -2.08
MDC1-208ENST00000494654 DYNAPQ8N1N2 210 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 SLC25A45Q8N413 288 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 RPL39LQ96EH5 51 aaKnown RBP2.03□□□□□ -2.08
MDC1-208ENST00000494654 WWC2-AS2Q96NR7 200 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 RNF5Q99942 180 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 KRTAP3-1Q9BYR8 98 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 TTTY12Q9BZ98 90 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 C16orf95Q9H693 158 aa2.03□□□□□ -2.08
MDC1-208ENST00000494654 DAZ1Q9NQZ3 744 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms