RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 APOC1P02654 83 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 C1QBP02746 253 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 SPI1P17947 270 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 PIGPP57054 158 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 TMEM258P61165 79 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 ZNF90Q03938 601 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 LCA10Q71F78 164 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 AKAP14Q86UN6 197 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.69□□□□□ -2.14
SMC4-224ENST00000494612 OR8D4Q8NGM9 314 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 AQP3Q92482 292 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 SCGB3A1Q96QR1 104 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 OSTCQ9NRP0 149 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 LYRM2Q9NU23 88 aaPredicted RBP1.69□□□□□ -2.14
SMC4-224ENST00000494612 AMMECR1Q9Y4X0 333 aaPredicted RBP1.69□□□□□ -2.14
SMC4-224ENST00000494612 LINC00312Q9Y6C7 94 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 PKHD1P08F94 4074 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 HERC1Q15751 4861 aa1.69□□□□□ -2.14
SMC4-224ENST00000494612 TRBV19A0A075B6N1 114 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 IGHV3-64A0A075B6Q5 118 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 TRGV10A0A0A0MS01 117 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 TRAV4A0A0B4J268 109 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 FUOMA2VDF0 154 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 OOSP1A8MZH6 123 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 CYB5BO43169 146 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 IGLV1-51P01701 117 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 NFYAP23511 347 aaPredicted RBP1.68□□□□□ -2.14
SMC4-224ENST00000494612 NFYBP25208 207 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 SRIP30626 198 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 CDC42P60953 191 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 SUPT4H1P63272 117 aaKnown RBP1.68□□□□□ -2.14
SMC4-224ENST00000494612 DPPA3Q6W0C5 159 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 MIR17HGQ75NE6 70 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 HIST3H2BBQ8N257 126 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 FAM24BQ8N5W8 94 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 OR5A2Q8NGI9 324 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 TERB2Q8NHR7 220 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 DYDC1Q8WWB3 177 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 GPX7Q96SL4 187 aaPredicted RBP1.68□□□□□ -2.14
SMC4-224ENST00000494612 CGREF1Q99674 301 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 NABP2Q9BQ15 211 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 TMEM70Q9BUB7 260 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 IMUPQ9GZP8 106 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 CHST6Q9GZX3 395 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 SH3BGRL3Q9H299 93 aa1.68□□□□□ -2.14
SMC4-224ENST00000494612 TMSB15BA0A087X1C1 80 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 A0A1B0GVG6 124 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 G3V318 75 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 J3QQQ9 107 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 GPR31O00270 319 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 ZNF737O75373 536 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 GYPBP06028 91 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 TRGC1P0CF51 173 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 FXYD6P3P58550 94 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 YPEL3P61236 119 aaPredicted RBP1.67□□□□□ -2.14
SMC4-224ENST00000494612 EIF5AP63241 154 aaKnown RBP1.67□□□□□ -2.14
SMC4-224ENST00000494612 SELENOWP63302 87 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 LTC4SQ16873 150 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 SCGB2B2Q4G0G5 96 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 HEPN1Q6WQI6 88 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 EXOC3-AS1Q8N2X6 119 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 ZNF439Q8NDP4 499 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 OR2T10Q8NGZ9 312 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 DCANP1Q8TF63 244 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 THEM6Q8WUY1 208 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 LEAP2Q969E1 77 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 HSPB9Q9BQS6 159 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 Q9BRP9 147 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 VPS13DQ5THJ4 4388 aa1.67□□□□□ -2.14
SMC4-224ENST00000494612 DYNC1H1Q14204 4646 aaKnown RBP1.67□□□□□ -2.14
SMC4-224ENST00000494612 FAT2Q9NYQ8 4349 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 DNAH2Q9P225 4427 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 SORL1Q92673 2214 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 HSPG2P98160 4391 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 TRBV10-2A0A0K0K1G8 114 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 DUXBA0A1W2PPF3 345 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 MAP1LC3B2A6NCE7 125 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 A6NIN4 97 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 RIIAD1A6NNX1 92 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 HMSDA8MTL9 139 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 CYB5AP00167 134 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 APOA2P02652 100 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 IFNA4P05014 189 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 RPSAP08865 295 aaKnown RBP1.66□□□□□ -2.14
SMC4-224ENST00000494612 G6PCP35575 357 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 TPPP2P59282 170 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 SLC38A11Q08AI6 406 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 DIAPH2-AS1Q14236 149 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 LINC01554Q52M75 96 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 KHDC3LQ587J8 217 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 RPL13AP3Q6NVV1 102 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 LINC00322Q6ZN03 302 aaPredicted RBP1.66□□□□□ -2.14
SMC4-224ENST00000494612 SLC25A26Q70HW3 274 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 KTN1-AS1Q86SY8 53 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 ANGPTL5Q86XS5 388 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 Q8IYB0 196 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 Q8N6K4 173 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 OR8J3Q8NGG0 315 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 OR5A1Q8NGJ0 315 aa1.66□□□□□ -2.14
SMC4-224ENST00000494612 MYOZ3Q8TDC0 251 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms