RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 PRO1854Q9UHT4 67 aa3.64□□□□□ -1.83
SNX13-210ENST00000494402 MLH3Q9UHC1 1453 aa3.64□□□□□ -1.83
SNX13-210ENST00000494402 TRGV4A0A0C4DH28 118 aa3.63□□□□□ -1.83
SNX13-210ENST00000494402 TEX49A0A1B0GTD5 131 aa3.63□□□□□ -1.83
SNX13-210ENST00000494402 JMJD7-PLA2G4BH0Y9G9 81 aa3.63□□□□□ -1.83
SNX13-210ENST00000494402 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
SNX13-210ENST00000494402 TOP2BQ02880 1626 aa3.62□□□□□ -1.83
SNX13-210ENST00000494402 GPR179Q6PRD1 2367 aa3.62□□□□□ -1.83
SNX13-210ENST00000494402 TET3O43151 1660 aa3.62□□□□□ -1.83
SNX13-210ENST00000494402 ATP10BO94823 1461 aa3.62□□□□□ -1.83
SNX13-210ENST00000494402 IQSEC2Q5JU85 1478 aa3.62□□□□□ -1.83
SNX13-210ENST00000494402 A0A1W2PPM0 123 aa3.62□□□□□ -1.83
SNX13-210ENST00000494402 PDCD5O14737 125 aa3.62□□□□□ -1.83
SNX13-210ENST00000494402 PDE6GP18545 87 aa3.62□□□□□ -1.83
SNX13-210ENST00000494402 KRTAP10-6P60371 365 aaPredicted RBP3.62□□□□□ -1.83
SNX13-210ENST00000494402 UBE2D3P61077 147 aa3.62□□□□□ -1.83
SNX13-210ENST00000494402 UBE2D2P62837 147 aa3.62□□□□□ -1.83
SNX13-210ENST00000494402 ETDBQ3ZM63 59 aa3.62□□□□□ -1.83
SNX13-210ENST00000494402 IGFL1Q6UW32 110 aa3.62□□□□□ -1.83
SNX13-210ENST00000494402 MED12LQ86YW9 2145 aa3.62□□□□□ -1.83
SNX13-210ENST00000494402 HEATR1Q9H583 2144 aaKnown RBP3.62□□□□□ -1.83
SNX13-210ENST00000494402 NESP48681 1621 aa3.62□□□□□ -1.83
SNX13-210ENST00000494402 EDC4Q6P2E9 1401 aaKnown RBP3.61□□□□□ -1.83
SNX13-210ENST00000494402 SUPT6HQ7KZ85 1726 aaKnown RBP3.61□□□□□ -1.83
SNX13-210ENST00000494402 KIF20BQ96Q89 1820 aa3.61□□□□□ -1.83
SNX13-210ENST00000494402 TANC1Q9C0D5 1861 aa3.61□□□□□ -1.83
SNX13-210ENST00000494402 HIGD1CA8MV81 97 aa3.61□□□□□ -1.83
SNX13-210ENST00000494402 RNASE3P12724 160 aaKnown RBP3.61□□□□□ -1.83
SNX13-210ENST00000494402 AMELYQ99218 206 aa3.61□□□□□ -1.83
SNX13-210ENST00000494402 CYSTM1Q9H1C7 97 aa3.61□□□□□ -1.83
SNX13-210ENST00000494402 PTPRDP23468 1912 aa3.61□□□□□ -1.83
SNX13-210ENST00000494402 ZFHX2Q9C0A1 2572 aaPredicted RBP3.61□□□□□ -1.83
SNX13-210ENST00000494402 COL4A2P08572 1712 aa3.61□□□□□ -1.83
SNX13-210ENST00000494402 MYOFQ9NZM1 2061 aa3.61□□□□□ -1.83
SNX13-210ENST00000494402 RGPD3A6NKT7 1758 aaPredicted RBP3.61□□□□□ -1.83
SNX13-210ENST00000494402 CLIP1P30622 1438 aa3.61□□□□□ -1.83
SNX13-210ENST00000494402 FANCAO15360 1455 aa3.6□□□□□ -1.83
SNX13-210ENST00000494402 CASP8AP2Q9UKL3 1982 aa3.6□□□□□ -1.83
SNX13-210ENST00000494402 ADAMTS7Q9UKP4 1686 aa3.6□□□□□ -1.83
SNX13-210ENST00000494402 H7BZZ5 65 aa3.6□□□□□ -1.83
SNX13-210ENST00000494402 COX6CP09669 75 aa3.6□□□□□ -1.83
SNX13-210ENST00000494402 Q8N6K4 173 aa3.6□□□□□ -1.83
SNX13-210ENST00000494402 TTTY12Q9BZ98 90 aa3.6□□□□□ -1.83
SNX13-210ENST00000494402 LRRIQ1Q96JM4 1722 aa3.59□□□□□ -1.83
SNX13-210ENST00000494402 TRAV22A0A0B4J277 110 aa3.59□□□□□ -1.83
SNX13-210ENST00000494402 A0A0G2JND7 137 aa3.59□□□□□ -1.83
SNX13-210ENST00000494402 KANTRA0A1W2PQU2 76 aa3.59□□□□□ -1.83
SNX13-210ENST00000494402 CHKB-CPT1BH3BT56 60 aa3.59□□□□□ -1.83
SNX13-210ENST00000494402 BCE1O60756 84 aa3.59□□□□□ -1.83
SNX13-210ENST00000494402 IGLV3-1P01715 115 aa3.59□□□□□ -1.83
SNX13-210ENST00000494402 EDDM3BP56851 147 aa3.59□□□□□ -1.83
SNX13-210ENST00000494402 SMIM11AP58511 58 aa3.59□□□□□ -1.83
SNX13-210ENST00000494402 NMSQ5H8A3 153 aa3.59□□□□□ -1.83
SNX13-210ENST00000494402 VMO1Q7Z5L0 202 aa3.59□□□□□ -1.83
SNX13-210ENST00000494402 TCHHQ07283 1943 aa3.59□□□□□ -1.83
SNX13-210ENST00000494402 UNC13BO14795 1591 aa3.59□□□□□ -1.84
SNX13-210ENST00000494402 KIF14Q15058 1648 aa3.59□□□□□ -1.84
SNX13-210ENST00000494402 IGLV3-32A0A0A0MS00 114 aa3.58□□□□□ -1.84
SNX13-210ENST00000494402 IGLC2P0DOY2 106 aa3.58□□□□□ -1.84
SNX13-210ENST00000494402 IGLC3P0DOY3 106 aa3.58□□□□□ -1.84
SNX13-210ENST00000494402 ELOF1P60002 83 aaKnown RBP3.58□□□□□ -1.84
SNX13-210ENST00000494402 ZNF56Q15929 161 aa3.58□□□□□ -1.84
SNX13-210ENST00000494402 Q5BKY6 102 aa3.58□□□□□ -1.84
SNX13-210ENST00000494402 Q5VV11 94 aa3.58□□□□□ -1.84
SNX13-210ENST00000494402 DIP2BQ9P265 1576 aa3.58□□□□□ -1.84
SNX13-210ENST00000494402 ZNF142P52746 1687 aaPredicted RBP3.58□□□□□ -1.84
SNX13-210ENST00000494402 A0A0C4DFX4 3053 aa3.57□□□□□ -1.84
SNX13-210ENST00000494402 POLA1P09884 1462 aaPredicted RBP3.57□□□□□ -1.84
SNX13-210ENST00000494402 SSBP1Q04837 148 aaKnown RBP3.57□□□□□ -1.84
SNX13-210ENST00000494402 COL16A1Q07092 1604 aaPredicted RBP3.57□□□□□ -1.84
SNX13-210ENST00000494402 WFDC2Q14508 124 aa3.57□□□□□ -1.84
SNX13-210ENST00000494402 MYO18AQ92614 2054 aaKnown RBP3.57□□□□□ -1.84
SNX13-210ENST00000494402 TXNDC17Q9BRA2 123 aa3.57□□□□□ -1.84
SNX13-210ENST00000494402 WFDC10AQ9H1F0 79 aa3.57□□□□□ -1.84
SNX13-210ENST00000494402 PEAK1Q9H792 1746 aa3.57□□□□□ -1.84
SNX13-210ENST00000494402 DYNLRB1Q9NP97 96 aa3.57□□□□□ -1.84
SNX13-210ENST00000494402 HIGD1BQ9P298 99 aa3.57□□□□□ -1.84
SNX13-210ENST00000494402 CEP192Q8TEP8 1941 aa3.56□□□□□ -1.84
SNX13-210ENST00000494402 PSME4Q14997 1843 aa3.56□□□□□ -1.84
SNX13-210ENST00000494402 CLTCQ00610 1675 aaKnown RBP3.56□□□□□ -1.84
SNX13-210ENST00000494402 NLRP1Q9C000 1473 aa3.56□□□□□ -1.84
SNX13-210ENST00000494402 ANKARQ7Z5J8 1434 aa3.56□□□□□ -1.84
SNX13-210ENST00000494402 SNRPFP62306 86 aaKnown RBP3.56□□□□□ -1.84
SNX13-210ENST00000494402 KLKP1Q107X0 134 aa3.56□□□□□ -1.84
SNX13-210ENST00000494402 BVES-AS1Q5T3Y7 98 aa3.56□□□□□ -1.84
SNX13-210ENST00000494402 TMEM14CQ9P0S9 112 aa3.56□□□□□ -1.84
SNX13-210ENST00000494402 SHANK1Q9Y566 2161 aa3.56□□□□□ -1.84
SNX13-210ENST00000494402 MAP3K4Q9Y6R4 1608 aa3.55□□□□□ -1.84
SNX13-210ENST00000494402 ADAMTS12P58397 1594 aa3.55□□□□□ -1.84
SNX13-210ENST00000494402 ZGRF1Q86YA3 2104 aa3.55□□□□□ -1.84
SNX13-210ENST00000494402 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
SNX13-210ENST00000494402 C20orf197Q8N268 126 aa3.55□□□□□ -1.84
SNX13-210ENST00000494402 LENEPQ9Y5L5 61 aa3.55□□□□□ -1.84
SNX13-210ENST00000494402 SIP14410 1827 aa3.54□□□□□ -1.84
SNX13-210ENST00000494402 TRBV6-7A0A0A0MS04 114 aa3.54□□□□□ -1.84
SNX13-210ENST00000494402 LOC285095A0A1B0GVY8 99 aa3.54□□□□□ -1.84
SNX13-210ENST00000494402 CLPSL1A2RUU4 121 aa3.54□□□□□ -1.84
SNX13-210ENST00000494402 TMEM14DPA8MWL7 114 aa3.54□□□□□ -1.84
SNX13-210ENST00000494402 PMCHL1Q16048 86 aa3.54□□□□□ -1.84
SNX13-210ENST00000494402 COA5Q86WW8 74 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms