RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 TRGV2A0A075B6R0 118 aa8.95□□□□□ -0.98
VPS52-220ENST00000493674 F5H697 171 aa8.95□□□□□ -0.98
VPS52-220ENST00000493674 H7C1H1 209 aa8.95□□□□□ -0.98
VPS52-220ENST00000493674 NDUFA6P56556 154 aa8.95□□□□□ -0.98
VPS52-220ENST00000493674 FHL2Q14192 279 aa8.95□□□□□ -0.98
VPS52-220ENST00000493674 STAB2Q8WWQ8 2551 aa8.95□□□□□ -0.98
VPS52-220ENST00000493674 IGHV3-73A0A0B4J1V6 119 aa8.94□□□□□ -0.98
VPS52-220ENST00000493674 SERF1AO75920 110 aa8.94□□□□□ -0.98
VPS52-220ENST00000493674 SPART-AS1P0CW21 52 aa8.94□□□□□ -0.98
VPS52-220ENST00000493674 HOXA5P20719 270 aa8.94□□□□□ -0.98
VPS52-220ENST00000493674 POLR2KP53803 58 aaKnown RBP8.94□□□□□ -0.98
VPS52-220ENST00000493674 SUMO2P61956 95 aaKnown RBP8.94□□□□□ -0.98
VPS52-220ENST00000493674 MAP1LC3AQ9H492 121 aa8.94□□□□□ -0.98
VPS52-220ENST00000493674 NIT2Q9NQR4 276 aa8.94□□□□□ -0.98
VPS52-220ENST00000493674 TRBV6-4A0A1B0GX49 114 aa8.93□□□□□ -0.98
VPS52-220ENST00000493674 K7EQD1 137 aa8.93□□□□□ -0.98
VPS52-220ENST00000493674 NUPR1O60356 82 aa8.93□□□□□ -0.98
VPS52-220ENST00000493674 S100A6P06703 90 aa8.93□□□□□ -0.98
VPS52-220ENST00000493674 DEFB130BP0DP73 79 aa8.93□□□□□ -0.98
VPS52-220ENST00000493674 DEFB130AP0DP74 79 aa8.93□□□□□ -0.98
VPS52-220ENST00000493674 SNRPEP62304 92 aaKnown RBP8.93□□□□□ -0.98
VPS52-220ENST00000493674 NIT1Q86X76 327 aa8.93□□□□□ -0.98
VPS52-220ENST00000493674 BAGE3Q86Y29 109 aa8.93□□□□□ -0.98
VPS52-220ENST00000493674 HIST3H2BBQ8N257 126 aa8.93□□□□□ -0.98
VPS52-220ENST00000493674 Q8N8P6 123 aa8.93□□□□□ -0.98
VPS52-220ENST00000493674 SMIM2Q9BVW6 85 aa8.93□□□□□ -0.98
VPS52-220ENST00000493674 TRBV10-1A0A0K0K1A3 114 aa8.92□□□□□ -0.98
VPS52-220ENST00000493674 PCP4L1A6NKN8 68 aa8.92□□□□□ -0.98
VPS52-220ENST00000493674 NHLRC4P0CG21 123 aaPredicted RBP8.92□□□□□ -0.98
VPS52-220ENST00000493674 P0DMU3 169 aa8.92□□□□□ -0.98
VPS52-220ENST00000493674 FAM231AP0DMU4 169 aa8.92□□□□□ -0.98
VPS52-220ENST00000493674 FAM231CP0DMU5 169 aa8.92□□□□□ -0.98
VPS52-220ENST00000493674 IFI27P40305 119 aaPredicted RBP8.92□□□□□ -0.98
VPS52-220ENST00000493674 DAD1P61803 113 aa8.92□□□□□ -0.98
VPS52-220ENST00000493674 SLC25A29Q8N8R3 303 aa8.92□□□□□ -0.98
VPS52-220ENST00000493674 NEXN-AS1Q8NBZ9 246 aa8.92□□□□□ -0.98
VPS52-220ENST00000493674 CHCHD1Q96BP2 118 aaKnown RBP8.92□□□□□ -0.98
VPS52-220ENST00000493674 DNAJC30Q96LL9 226 aa8.92□□□□□ -0.98
VPS52-220ENST00000493674 TMEM70Q9BUB7 260 aa8.92□□□□□ -0.98
VPS52-220ENST00000493674 NXT2Q9NPJ8 142 aaKnown RBP8.92□□□□□ -0.98
VPS52-220ENST00000493674 Q9UF83 564 aa8.92□□□□□ -0.98
VPS52-220ENST00000493674 A0A0J9YWU9 116 aa8.91□□□□□ -0.98
VPS52-220ENST00000493674 TRBV27A0A0K0K1C4 114 aa8.91□□□□□ -0.98
VPS52-220ENST00000493674 IFITM10A6NMD0 228 aa8.91□□□□□ -0.98
VPS52-220ENST00000493674 LINC00614P0C842 121 aa8.91□□□□□ -0.98
VPS52-220ENST00000493674 LINC00694P0DN24 101 aa8.91□□□□□ -0.98
VPS52-220ENST00000493674 PMCHP20382 165 aa8.91□□□□□ -0.98
VPS52-220ENST00000493674 C12orf74Q32Q52 190 aa8.91□□□□□ -0.98
VPS52-220ENST00000493674 ST20Q9HBF5 79 aa8.91□□□□□ -0.98
VPS52-220ENST00000493674 LOC389332A0A1B0GUA5 103 aa8.9□□□□□ -0.98
VPS52-220ENST00000493674 SDHAF1A6NFY7 115 aa8.9□□□□□ -0.98
VPS52-220ENST00000493674 ATP5G1P05496 136 aa8.9□□□□□ -0.98
VPS52-220ENST00000493674 LINC00469Q8N7U9 141 aa8.9□□□□□ -0.98
VPS52-220ENST00000493674 PACRGQ96M98 296 aaPredicted RBP8.9□□□□□ -0.98
VPS52-220ENST00000493674 ZMAT4Q9H898 229 aa8.9□□□□□ -0.98
VPS52-220ENST00000493674 TRGV4A0A0C4DH28 118 aa8.89□□□□□ -0.99
VPS52-220ENST00000493674 K7EMI3 77 aa8.89□□□□□ -0.99
VPS52-220ENST00000493674 CRYBA4P53673 196 aa8.89□□□□□ -0.99
VPS52-220ENST00000493674 RHOHQ15669 191 aa8.89□□□□□ -0.99
VPS52-220ENST00000493674 RNASEKQ6P5S7 137 aaKnown RBP8.89□□□□□ -0.99
VPS52-220ENST00000493674 PRSS3P2Q8NHM4 247 aa8.89□□□□□ -0.99
VPS52-220ENST00000493674 C12orf57Q99622 126 aa8.89□□□□□ -0.99
VPS52-220ENST00000493674 AP5S1Q9NUS5 200 aa8.89□□□□□ -0.99
VPS52-220ENST00000493674 DNAH7Q8WXX0 4024 aa8.89□□□□□ -0.99
VPS52-220ENST00000493674 A0A096LNJ9 63 aa8.88□□□□□ -0.99
VPS52-220ENST00000493674 UBE2D3P61077 147 aa8.88□□□□□ -0.99
VPS52-220ENST00000493674 UBE2D2P62837 147 aa8.88□□□□□ -0.99
VPS52-220ENST00000493674 FA2HQ7L5A8 372 aa8.88□□□□□ -0.99
VPS52-220ENST00000493674 PRO0255Q9UI72 69 aa8.88□□□□□ -0.99
VPS52-220ENST00000493674 TRBV7-3A0A075B6L6 115 aa8.87□□□□□ -0.99
VPS52-220ENST00000493674 IGHV1-24A0A0C4DH33 117 aa8.87□□□□□ -0.99
VPS52-220ENST00000493674 VCYO14598 125 aa8.87□□□□□ -0.99
VPS52-220ENST00000493674 HSBP1O75506 76 aa8.87□□□□□ -0.99
VPS52-220ENST00000493674 VSIG2Q96IQ7 327 aa8.87□□□□□ -0.99
VPS52-220ENST00000493674 HIST1H2BLQ99880 126 aa8.87□□□□□ -0.99
VPS52-220ENST00000493674 HHLA3Q9XRX5 114 aa8.87□□□□□ -0.99
VPS52-220ENST00000493674 DYNC2H1Q8NCM8 4307 aaKnown RBP8.87□□□□□ -0.99
VPS52-220ENST00000493674 I3L3M4 83 aa8.86□□□□□ -0.99
VPS52-220ENST00000493674 TSHBP01222 138 aa8.86□□□□□ -0.99
VPS52-220ENST00000493674 SMIM6P0DI80 62 aa8.86□□□□□ -0.99
VPS52-220ENST00000493674 AKR1D1P51857 326 aa8.86□□□□□ -0.99
VPS52-220ENST00000493674 RPL36AP83881 106 aaKnown RBP8.86□□□□□ -0.99
VPS52-220ENST00000493674 PDZD11Q5EBL8 140 aa8.86□□□□□ -0.99
VPS52-220ENST00000493674 NEGR1Q7Z3B1 354 aa8.86□□□□□ -0.99
VPS52-220ENST00000493674 RPL36ALQ969Q0 106 aaKnown RBP8.86□□□□□ -0.99
VPS52-220ENST00000493674 TNFRSF18Q9Y5U5 241 aa8.86□□□□□ -0.99
VPS52-220ENST00000493674 LOC100131303A0A0U1RQF7 123 aa8.85□□□□□ -0.99
VPS52-220ENST00000493674 AMTP48728 403 aa8.85□□□□□ -0.99
VPS52-220ENST00000493674 LAGE3Q14657 143 aa8.85□□□□□ -0.99
VPS52-220ENST00000493674 Q6ZTC4 211 aa8.85□□□□□ -0.99
VPS52-220ENST00000493674 FAM19A2Q8N3H0 131 aa8.85□□□□□ -0.99
VPS52-220ENST00000493674 ZNRF2Q8NHG8 242 aa8.85□□□□□ -0.99
VPS52-220ENST00000493674 C11orf45Q8TAV5 145 aa8.85□□□□□ -0.99
VPS52-220ENST00000493674 PRADC1Q9BSG0 188 aa8.85□□□□□ -0.99
VPS52-220ENST00000493674 TCAPO15273 167 aa8.84□□□□□ -0.99
VPS52-220ENST00000493674 FCER1GP30273 86 aa8.84□□□□□ -0.99
VPS52-220ENST00000493674 NANOS2P60321 138 aaKnown RBP8.84□□□□□ -0.99
VPS52-220ENST00000493674 ORMDL2Q53FV1 153 aa8.84□□□□□ -0.99
VPS52-220ENST00000493674 TMEM18Q96B42 140 aa8.84□□□□□ -0.99
VPS52-220ENST00000493674 GAGE12JA6NER3 117 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms