RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 TRGV5A0A0B4J1U4 118 aa5.18□□□□□ -1.58
VPS13B-205ENST00000493587 ZNF80P51504 273 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-205ENST00000493587 CD164Q04900 197 aa5.18□□□□□ -1.58
VPS13B-205ENST00000493587 C1orf229Q6ZS94 237 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-205ENST00000493587 ZNRF1Q8ND25 227 aa5.18□□□□□ -1.58
VPS13B-205ENST00000493587 E7EUB6 86 aa5.17□□□□□ -1.58
VPS13B-205ENST00000493587 NXPH4O95158 308 aa5.17□□□□□ -1.58
VPS13B-205ENST00000493587 DAD1P61803 113 aa5.17□□□□□ -1.58
VPS13B-205ENST00000493587 FP248Q71RG6 208 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-205ENST00000493587 NDUFA4L2Q9NRX3 87 aa5.17□□□□□ -1.58
VPS13B-205ENST00000493587 ZNRD1Q9P1U0 126 aa5.17□□□□□ -1.58
VPS13B-205ENST00000493587 SPRR3Q9UBC9 169 aa5.17□□□□□ -1.58
VPS13B-205ENST00000493587 EP300Q09472 2414 aaPredicted RBP5.17□□□□□ -1.58
VPS13B-205ENST00000493587 CCL11P51671 97 aa5.17□□□□□ -1.58
VPS13B-205ENST00000493587 RPL39LQ96EH5 51 aaKnown RBP5.17□□□□□ -1.58
VPS13B-205ENST00000493587 MUC6Q6W4X9 2439 aa5.17□□□□□ -1.58
VPS13B-205ENST00000493587 TRBV6-1A0A0K0K1D8 114 aa5.17□□□□□ -1.58
VPS13B-205ENST00000493587 LINC01546A6NGU7 62 aa5.17□□□□□ -1.58
VPS13B-205ENST00000493587 FAM201AQ5SY85 155 aa5.17□□□□□ -1.58
VPS13B-205ENST00000493587 WFDC9Q8NEX5 89 aa5.17□□□□□ -1.58
VPS13B-205ENST00000493587 DSCAMO60469 2012 aa5.17□□□□□ -1.58
VPS13B-205ENST00000493587 TRBV7-6A0A0J9YX20 115 aa5.16□□□□□ -1.58
VPS13B-205ENST00000493587 PAX4O43316 350 aa5.16□□□□□ -1.58
VPS13B-205ENST00000493587 HILS1P60008 231 aa5.16□□□□□ -1.58
VPS13B-205ENST00000493587 DAND5Q8N907 189 aa5.16□□□□□ -1.58
VPS13B-205ENST00000493587 C14orf132Q9NPU4 83 aa5.16□□□□□ -1.58
VPS13B-205ENST00000493587 F5H697 171 aa5.16□□□□□ -1.58
VPS13B-205ENST00000493587 F8WEM9 126 aa5.16□□□□□ -1.58
VPS13B-205ENST00000493587 DEFB108BQ8NET1 73 aa5.16□□□□□ -1.58
VPS13B-205ENST00000493587 DCANP1Q8TF63 244 aa5.16□□□□□ -1.58
VPS13B-205ENST00000493587 GVINP1Q7Z2Y8 2422 aa5.16□□□□□ -1.58
VPS13B-205ENST00000493587 HOXD3P31249 432 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-205ENST00000493587 TMEM14CQ9P0S9 112 aa5.16□□□□□ -1.58
VPS13B-205ENST00000493587 S4R3C0 116 aa5.16□□□□□ -1.58
VPS13B-205ENST00000493587 ZFHX2Q9C0A1 2572 aaPredicted RBP5.15□□□□□ -1.58
VPS13B-205ENST00000493587 LEPROTO15243 131 aa5.15□□□□□ -1.58
VPS13B-205ENST00000493587 RPL39P62891 51 aaKnown RBP5.15□□□□□ -1.58
VPS13B-205ENST00000493587 LYPD1Q8N2G4 141 aa5.15□□□□□ -1.58
VPS13B-205ENST00000493587 FDCSPQ8NFU4 85 aa5.15□□□□□ -1.58
VPS13B-205ENST00000493587 Q9HAA7 133 aa5.15□□□□□ -1.58
VPS13B-205ENST00000493587 AKAP9Q99996 3911 aa5.15□□□□□ -1.59
VPS13B-205ENST00000493587 A0A0J9YXY3 114 aa5.15□□□□□ -1.59
VPS13B-205ENST00000493587 RUSC1-AS1Q66K80 236 aa5.15□□□□□ -1.59
VPS13B-205ENST00000493587 Q6JHZ5 121 aa5.15□□□□□ -1.59
VPS13B-205ENST00000493587 ADGRG4Q8IZF6 3080 aa5.15□□□□□ -1.59
VPS13B-205ENST00000493587 NBEAQ8NFP9 2946 aa5.15□□□□□ -1.59
VPS13B-205ENST00000493587 CCKP06307 115 aa5.14□□□□□ -1.59
VPS13B-205ENST00000493587 RPL27AP46776 148 aaKnown RBP5.14□□□□□ -1.59
VPS13B-205ENST00000493587 ADAMTSL4-AS1Q5T5F5 129 aa5.14□□□□□ -1.59
VPS13B-205ENST00000493587 LINC01600Q96MT4 127 aa5.14□□□□□ -1.59
VPS13B-205ENST00000493587 HRNRQ86YZ3 2850 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-205ENST00000493587 IGHV3-72A0A0B4J1Y9 119 aa5.14□□□□□ -1.59
VPS13B-205ENST00000493587 HOXB4P17483 251 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-205ENST00000493587 PRB3Q04118 309 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-205ENST00000493587 C16orf95Q9H693 158 aa5.14□□□□□ -1.59
VPS13B-205ENST00000493587 SLC25A15Q9Y619 301 aa5.14□□□□□ -1.59
VPS13B-205ENST00000493587 IGLV4-69A0A075B6H9 119 aa5.14□□□□□ -1.59
VPS13B-205ENST00000493587 TRAV21A0A0B4J279 112 aa5.14□□□□□ -1.59
VPS13B-205ENST00000493587 SAA4P35542 130 aa5.14□□□□□ -1.59
VPS13B-205ENST00000493587 APRG1Q8IVJ8 170 aa5.14□□□□□ -1.59
VPS13B-205ENST00000493587 RNASE6Q93091 150 aaKnown RBP5.14□□□□□ -1.59
VPS13B-205ENST00000493587 CXXC4Q9H2H0 198 aa5.14□□□□□ -1.59
VPS13B-205ENST00000493587 ANKRD11Q6UB99 2663 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-205ENST00000493587 CUL9Q8IWT3 2517 aa5.13□□□□□ -1.59
VPS13B-205ENST00000493587 RMI2Q96E14 147 aa5.13□□□□□ -1.59
VPS13B-205ENST00000493587 ROS1P08922 2347 aa5.13□□□□□ -1.59
VPS13B-205ENST00000493587 PRB1P04280 392 aa5.13□□□□□ -1.59
VPS13B-205ENST00000493587 MRPS36P82909 103 aaKnown RBP5.13□□□□□ -1.59
VPS13B-205ENST00000493587 C11orf68Q9H3H3 251 aaKnown RBP5.13□□□□□ -1.59
VPS13B-205ENST00000493587 LINC00846Q9NV44 126 aa5.13□□□□□ -1.59
VPS13B-205ENST00000493587 NDUFA12Q9UI09 145 aa5.13□□□□□ -1.59
VPS13B-205ENST00000493587 PHLDA3Q9Y5J5 127 aa5.13□□□□□ -1.59
VPS13B-205ENST00000493587 IGHV3OR16-8A0A075B7F1 116 aa5.13□□□□□ -1.59
VPS13B-205ENST00000493587 COX7A2LO14548 114 aa5.13□□□□□ -1.59
VPS13B-205ENST00000493587 TRBV12-3P01733 135 aa5.13□□□□□ -1.59
VPS13B-205ENST00000493587 VSIG2Q96IQ7 327 aa5.13□□□□□ -1.59
VPS13B-205ENST00000493587 SEM1Q6ZVN7 128 aa5.12□□□□□ -1.59
VPS13B-205ENST00000493587 BPESC1Q9GZL8 116 aa5.12□□□□□ -1.59
VPS13B-205ENST00000493587 H7BZZ5 65 aa5.12□□□□□ -1.59
VPS13B-205ENST00000493587 SOCS3O14543 225 aa5.12□□□□□ -1.59
VPS13B-205ENST00000493587 ENHOQ6UWT2 76 aa5.12□□□□□ -1.59
VPS13B-205ENST00000493587 TMEM61Q8N0U2 210 aa5.12□□□□□ -1.59
VPS13B-205ENST00000493587 LY6G5BQ8NDX9 201 aa5.12□□□□□ -1.59
VPS13B-205ENST00000493587 OPRPNQ99935 248 aaPredicted RBP5.12□□□□□ -1.59
VPS13B-205ENST00000493587 ZNF580Q9UK33 172 aa5.12□□□□□ -1.59
VPS13B-205ENST00000493587 A0A0J9YXV3 536 aa5.11□□□□□ -1.59
VPS13B-205ENST00000493587 A8MZ25 164 aa5.11□□□□□ -1.59
VPS13B-205ENST00000493587 IGFL3Q6UXB1 125 aa5.11□□□□□ -1.59
VPS13B-205ENST00000493587 IGLV1-44P01699 117 aa5.11□□□□□ -1.59
VPS13B-205ENST00000493587 TMEM167AQ8TBQ9 72 aa5.11□□□□□ -1.59
VPS13B-205ENST00000493587 UBE2D4Q9Y2X8 147 aa5.11□□□□□ -1.59
VPS13B-205ENST00000493587 ITPR1Q14643 2758 aa5.11□□□□□ -1.59
VPS13B-205ENST00000493587 A0A087WZ39 114 aa5.11□□□□□ -1.59
VPS13B-205ENST00000493587 IGHV3-35A0A0C4DH35 117 aa5.11□□□□□ -1.59
VPS13B-205ENST00000493587 RPL28P46779 137 aaKnown RBP5.11□□□□□ -1.59
VPS13B-205ENST00000493587 TMEM141Q96I45 108 aa5.11□□□□□ -1.59
VPS13B-205ENST00000493587 DEFB127Q9H1M4 99 aa5.11□□□□□ -1.59
VPS13B-205ENST00000493587 IGHV3OR16-10A0A075B7F0 116 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 SDHAF1A6NFY7 115 aa5.1□□□□□ -1.59
VPS13B-205ENST00000493587 H3BRN7 92 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms