RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 ESRGQ1W209 222 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 TMEM241Q24JQ0 296 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 PRR27Q6MZM9 219 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 SH2D6Q7Z4S9 175 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 ZFP82Q8N141 532 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 PCNPQ8WW12 178 aaKnown RBP4.63□□□□□ -1.67
VPS52-219ENST00000493379 TMEM18Q96B42 140 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 SMIM7Q9BQ49 75 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 SAMD10Q9BYL1 202 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 OSTCQ9NRP0 149 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 TRGV4A0A0C4DH28 118 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 H3BVH4 76 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 K7EQD1 137 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 CTRLP40313 264 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 RAB14P61106 215 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 RPL23P62829 140 aaKnown RBP4.62□□□□□ -1.67
VPS52-219ENST00000493379 CACNG7P62955 275 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 LYPD5Q6UWN5 251 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 Q6ZR54 194 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 NEGR1Q7Z3B1 354 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 SLC25A29Q8N8R3 303 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 FER1L6-AS1Q8NA97 138 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 OR2D3Q8NGH3 330 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 OR10AG1Q8NH19 301 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 ZNRF2Q8NHG8 242 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 ISOC2Q96AB3 205 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 GFRA4Q9GZZ7 299 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 RNASE7Q9H1E1 156 aaKnown RBP4.62□□□□□ -1.67
VPS52-219ENST00000493379 RPP21Q9H633 154 aaKnown RBP4.62□□□□□ -1.67
VPS52-219ENST00000493379 JPT2Q9H910 190 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 NAT8Q9UHE5 227 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 LINC00588Q9Y4M8 146 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 PHLDA3Q9Y5J5 127 aa4.62□□□□□ -1.67
VPS52-219ENST00000493379 TMSB15BA0A087X1C1 80 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 A0A0J9YY99 117 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 TRBV10-1A0A0K0K1A3 114 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 A8MWL6 223 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 CCL18P55774 89 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 RAB4BP61018 213 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 SOHLH1Q5JUK2 328 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 UQCC3Q6UW78 93 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 OR10G8Q8NGN5 311 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 TSKUQ8WUA8 353 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 GTSF1Q8WW33 167 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 MRPS16Q9Y3D3 137 aaKnown RBP4.61□□□□□ -1.67
VPS52-219ENST00000493379 COX11Q9Y6N1 276 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 ICOSQ9Y6W8 199 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 V9GYV3 84 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 NACAE9PAV3 2078 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 DNAH5Q8TE73 4624 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 FAT4Q6V0I7 4981 aa4.61□□□□□ -1.67
VPS52-219ENST00000493379 FAT1Q14517 4588 aa4.6□□□□□ -1.67
VPS52-219ENST00000493379 VPS13BQ7Z7G8 4022 aa4.6□□□□□ -1.67
VPS52-219ENST00000493379 LINC00862A6NCI5 91 aa4.6□□□□□ -1.67
VPS52-219ENST00000493379 GAGE12JA6NER3 117 aa4.6□□□□□ -1.67
VPS52-219ENST00000493379 K7EP13 123 aa4.6□□□□□ -1.67
VPS52-219ENST00000493379 GATCO43716 136 aaKnown RBP4.6□□□□□ -1.67
VPS52-219ENST00000493379 CDK2AP2O75956 126 aa4.6□□□□□ -1.67
VPS52-219ENST00000493379 NUDT3O95989 172 aa4.6□□□□□ -1.67
VPS52-219ENST00000493379 NTF3P20783 257 aa4.6□□□□□ -1.67
VPS52-219ENST00000493379 RHOHQ15669 191 aa4.6□□□□□ -1.67
VPS52-219ENST00000493379 LYZL1Q6UWQ5 148 aa4.6□□□□□ -1.67
VPS52-219ENST00000493379 FRZBQ92765 325 aa4.6□□□□□ -1.67
VPS52-219ENST00000493379 PRADC1Q9BSG0 188 aa4.6□□□□□ -1.67
VPS52-219ENST00000493379 Q9H8V8 135 aa4.6□□□□□ -1.67
VPS52-219ENST00000493379 SMIM27A0A1W2PRY6 76 aa4.59□□□□□ -1.67
VPS52-219ENST00000493379 M0R381 172 aa4.59□□□□□ -1.67
VPS52-219ENST00000493379 GZMBP10144 247 aa4.59□□□□□ -1.67
VPS52-219ENST00000493379 ERVFC1-1P60608 527 aa4.59□□□□□ -1.67
VPS52-219ENST00000493379 PNRC1Q12796 327 aaPredicted RBP4.59□□□□□ -1.67
VPS52-219ENST00000493379 C10orf91Q5T1B1 145 aa4.59□□□□□ -1.67
VPS52-219ENST00000493379 C10orf25Q5T742 122 aa4.59□□□□□ -1.67
VPS52-219ENST00000493379 LCE3BQ5TA77 95 aa4.59□□□□□ -1.67
VPS52-219ENST00000493379 SPANXN1Q5VSR9 72 aa4.59□□□□□ -1.67
VPS52-219ENST00000493379 LINC00336Q6ZUF6 198 aa4.59□□□□□ -1.67
VPS52-219ENST00000493379 Q9UF83 564 aa4.59□□□□□ -1.67
VPS52-219ENST00000493379 LOC100131303A0A0U1RQF7 123 aa4.58□□□□□ -1.68
VPS52-219ENST00000493379 TMEM218A2RU14 115 aa4.58□□□□□ -1.68
VPS52-219ENST00000493379 M0QY20 66 aa4.58□□□□□ -1.68
VPS52-219ENST00000493379 VCYO14598 125 aa4.58□□□□□ -1.68
VPS52-219ENST00000493379 SLPIP03973 132 aa4.58□□□□□ -1.68
VPS52-219ENST00000493379 TRGC1P0CF51 173 aa4.58□□□□□ -1.68
VPS52-219ENST00000493379 SRIP30626 198 aa4.58□□□□□ -1.68
VPS52-219ENST00000493379 C14orf178Q8N769 122 aaPredicted RBP4.58□□□□□ -1.68
VPS52-219ENST00000493379 C15orf54Q8N8G6 183 aa4.58□□□□□ -1.68
VPS52-219ENST00000493379 AP1S3Q96PC3 154 aa4.58□□□□□ -1.68
VPS52-219ENST00000493379 GTSF1LQ9H1H1 148 aa4.58□□□□□ -1.68
VPS52-219ENST00000493379 TRBV7-3A0A075B6L6 115 aa4.57□□□□□ -1.68
VPS52-219ENST00000493379 IGHV3-73A0A0B4J1V6 119 aa4.57□□□□□ -1.68
VPS52-219ENST00000493379 NBDYA0A0U1RRE5 68 aa4.57□□□□□ -1.68
VPS52-219ENST00000493379 HIGD1CA8MV81 97 aa4.57□□□□□ -1.68
VPS52-219ENST00000493379 DNAH10OSP0CZ25 163 aa4.57□□□□□ -1.68
VPS52-219ENST00000493379 EVI2AP22794 236 aa4.57□□□□□ -1.68
VPS52-219ENST00000493379 CEBPGP53567 150 aa4.57□□□□□ -1.68
VPS52-219ENST00000493379 UBE2D3P61077 147 aa4.57□□□□□ -1.68
VPS52-219ENST00000493379 UBE2D2P62837 147 aa4.57□□□□□ -1.68
VPS52-219ENST00000493379 LELP1Q5T871 98 aa4.57□□□□□ -1.68
VPS52-219ENST00000493379 NUP35Q8NFH5 326 aa4.57□□□□□ -1.68
VPS52-219ENST00000493379 ATP6V0E2Q8NHE4 81 aa4.57□□□□□ -1.68
VPS52-219ENST00000493379 DNAJC30Q96LL9 226 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 221 ms