RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 UFSP1Q6NVU6 142 aa10.19□□□□□ -0.78
PTPN7-216ENST00000492977 SHISA2Q6UWI4 295 aa10.19□□□□□ -0.78
PTPN7-216ENST00000492977 TOMM6Q96B49 74 aa10.19□□□□□ -0.78
PTPN7-216ENST00000492977 WFDC10AQ9H1F0 79 aa10.19□□□□□ -0.78
PTPN7-216ENST00000492977 UQCR10Q9UDW1 63 aa10.19□□□□□ -0.78
PTPN7-216ENST00000492977 GOLT1BQ9Y3E0 138 aa10.19□□□□□ -0.78
PTPN7-216ENST00000492977 TRBV27A0A0K0K1C4 114 aa10.18□□□□□ -0.78
PTPN7-216ENST00000492977 LINC01549A6NIU2 74 aa10.18□□□□□ -0.78
PTPN7-216ENST00000492977 KIR2DL4Q99706 377 aa10.18□□□□□ -0.78
PTPN7-216ENST00000492977 PMCHL2Q9BQD1 86 aa10.18□□□□□ -0.78
PTPN7-216ENST00000492977 IGHV3OR16-12A0A075B7B8 117 aa10.18□□□□□ -0.78
PTPN7-216ENST00000492977 SDHAF1A6NFY7 115 aa10.18□□□□□ -0.78
PTPN7-216ENST00000492977 RHODO00212 210 aa10.18□□□□□ -0.78
PTPN7-216ENST00000492977 PRSS1P07477 247 aa10.18□□□□□ -0.78
PTPN7-216ENST00000492977 RPL35AP18077 110 aaKnown RBP10.18□□□□□ -0.78
PTPN7-216ENST00000492977 AZU1P20160 251 aa10.18□□□□□ -0.78
PTPN7-216ENST00000492977 ANKRD39Q53RE8 183 aa10.18□□□□□ -0.78
PTPN7-216ENST00000492977 IL17DQ8TAD2 202 aa10.18□□□□□ -0.78
PTPN7-216ENST00000492977 TMEM263Q8WUH6 116 aaKnown RBP10.18□□□□□ -0.78
PTPN7-216ENST00000492977 hDV102S1A0JD36 115 aa10.17□□□□□ -0.78
PTPN7-216ENST00000492977 CFAP126Q5VTH2 177 aa10.17□□□□□ -0.78
PTPN7-216ENST00000492977 GTSCR1Q86UQ5 136 aa10.17□□□□□ -0.78
PTPN7-216ENST00000492977 RNASE8Q8TDE3 154 aaKnown RBP10.17□□□□□ -0.78
PTPN7-216ENST00000492977 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.16□□□□□ -0.78
PTPN7-216ENST00000492977 RS1O15537 224 aa10.16□□□□□ -0.78
PTPN7-216ENST00000492977 LBHQ53QV2 105 aaPredicted RBP10.16□□□□□ -0.78
PTPN7-216ENST00000492977 C2orf66Q6UXQ4 117 aa10.16□□□□□ -0.78
PTPN7-216ENST00000492977 F8P00451 2351 aa10.16□□□□□ -0.78
PTPN7-216ENST00000492977 ODF1Q14990 250 aa10.15□□□□□ -0.78
PTPN7-216ENST00000492977 CSNK1G2-AS1Q8NCQ2 148 aa10.15□□□□□ -0.78
PTPN7-216ENST00000492977 SCGB3A1Q96QR1 104 aa10.15□□□□□ -0.78
PTPN7-216ENST00000492977 MRPL16Q9NX20 251 aaKnown RBP10.15□□□□□ -0.78
PTPN7-216ENST00000492977 ZFP2Q6ZN57 461 aa10.14□□□□□ -0.79
PTPN7-216ENST00000492977 Q6ZN92 141 aa10.14□□□□□ -0.79
PTPN7-216ENST00000492977 NEGR1Q7Z3B1 354 aa10.14□□□□□ -0.79
PTPN7-216ENST00000492977 MRPL52Q86TS9 123 aaKnown RBP10.14□□□□□ -0.79
PTPN7-216ENST00000492977 WFDC9Q8NEX5 89 aa10.14□□□□□ -0.79
PTPN7-216ENST00000492977 ZMAT4Q9H898 229 aa10.14□□□□□ -0.79
PTPN7-216ENST00000492977 CYSLTR1Q9Y271 337 aa10.14□□□□□ -0.79
PTPN7-216ENST00000492977 IGHV3-73A0A0B4J1V6 119 aa10.14□□□□□ -0.79
PTPN7-216ENST00000492977 RIPPLY3P57055 190 aa10.14□□□□□ -0.79
PTPN7-216ENST00000492977 DAZ2Q13117 558 aaKnown RBP10.14□□□□□ -0.79
PTPN7-216ENST00000492977 RHOHQ15669 191 aa10.14□□□□□ -0.79
PTPN7-216ENST00000492977 ERASQ7Z444 233 aa10.14□□□□□ -0.79
PTPN7-216ENST00000492977 C16orf74Q96GX8 76 aa10.14□□□□□ -0.79
PTPN7-216ENST00000492977 DKK2Q9UBU2 259 aa10.14□□□□□ -0.79
PTPN7-216ENST00000492977 NACAE9PAV3 2078 aa10.13□□□□□ -0.79
PTPN7-216ENST00000492977 TRAV12-1A0A0B4J245 112 aa10.13□□□□□ -0.79
PTPN7-216ENST00000492977 I3L3M4 83 aa10.13□□□□□ -0.79
PTPN7-216ENST00000492977 IGHV3-53P01767 116 aa10.13□□□□□ -0.79
PTPN7-216ENST00000492977 SPATA3Q8NHX4 192 aa10.13□□□□□ -0.79
PTPN7-216ENST00000492977 A0A087WX48 190 aa10.12□□□□□ -0.79
PTPN7-216ENST00000492977 TRGV1A0A0A0MS02 117 aa10.12□□□□□ -0.79
PTPN7-216ENST00000492977 DNAJC30Q96LL9 226 aa10.12□□□□□ -0.79
PTPN7-216ENST00000492977 TNFRSF18Q9Y5U5 241 aa10.12□□□□□ -0.79
PTPN7-216ENST00000492977 FLNBO75369 2602 aaKnown RBP10.12□□□□□ -0.79
PTPN7-216ENST00000492977 M0R143 59 aa10.11□□□□□ -0.79
PTPN7-216ENST00000492977 DPM2O94777 84 aa10.11□□□□□ -0.79
PTPN7-216ENST00000492977 HNRNPA3P51991 378 aaKnown RBP10.11□□□□□ -0.79
PTPN7-216ENST00000492977 RRN3P1Q2M238 152 aa10.11□□□□□ -0.79
PTPN7-216ENST00000492977 TSHBP01222 138 aa10.1□□□□□ -0.79
PTPN7-216ENST00000492977 IGKCP01834 107 aa10.1□□□□□ -0.79
PTPN7-216ENST00000492977 SLC25A34Q6PIV7 304 aa10.1□□□□□ -0.79
PTPN7-216ENST00000492977 Q6ZSN1 163 aa10.1□□□□□ -0.79
PTPN7-216ENST00000492977 NEXN-AS1Q8NBZ9 246 aa10.1□□□□□ -0.79
PTPN7-216ENST00000492977 OR4C5Q8NGB2 326 aa10.1□□□□□ -0.79
PTPN7-216ENST00000492977 TMEM141Q96I45 108 aa10.1□□□□□ -0.79
PTPN7-216ENST00000492977 TP53TG1Q9Y2A0 90 aa10.1□□□□□ -0.79
PTPN7-216ENST00000492977 MRPS16Q9Y3D3 137 aaKnown RBP10.1□□□□□ -0.79
PTPN7-216ENST00000492977 PLAC8L1A1L4L8 177 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 IGIPA6NJ69 53 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 WIPF1O43516 503 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 TIMM17AQ99595 171 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 OVOL2Q9BRP0 275 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 TRAV4A0A0B4J268 109 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 P0DMU3 169 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 FAM231AP0DMU4 169 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 FAM231CP0DMU5 169 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 COX8AP10176 69 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 PLNP26678 52 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 Q6ZTI0 123 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 STPG4Q8N801 248 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 BAALCQ8WXS3 180 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 SNHG12Q9BXW3 62 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 NOP10Q9NPE3 64 aaKnown RBP10.09□□□□□ -0.79
PTPN7-216ENST00000492977 MRPL35Q9NZE8 188 aaKnown RBP10.09□□□□□ -0.79
PTPN7-216ENST00000492977 HHLA3Q9XRX5 114 aa10.09□□□□□ -0.79
PTPN7-216ENST00000492977 JMJD1CQ15652 2540 aa10.08□□□□□ -0.8
PTPN7-216ENST00000492977 F8VRH5 84 aa10.08□□□□□ -0.8
PTPN7-216ENST00000492977 CIDEAO60543 219 aa10.08□□□□□ -0.8
PTPN7-216ENST00000492977 C2orf88Q9BSF0 95 aa10.08□□□□□ -0.8
PTPN7-216ENST00000492977 RPL39P62891 51 aaKnown RBP10.07□□□□□ -0.8
PTPN7-216ENST00000492977 KRTAP24-1Q3LI83 254 aa10.07□□□□□ -0.8
PTPN7-216ENST00000492977 C20orf203Q8NBC4 194 aa10.07□□□□□ -0.8
PTPN7-216ENST00000492977 CHTOPQ9Y3Y2 248 aaKnown RBP10.07□□□□□ -0.8
PTPN7-216ENST00000492977 PRSS29PA6NIE9 313 aa10.06□□□□□ -0.8
PTPN7-216ENST00000492977 KIR2DL5BQ8NHK3 375 aa10.06□□□□□ -0.8
PTPN7-216ENST00000492977 DEFB104AQ8WTQ1 72 aa10.06□□□□□ -0.8
PTPN7-216ENST00000492977 ZNF479Q96JC4 524 aa10.06□□□□□ -0.8
PTPN7-216ENST00000492977 TRBV10-1A0A0K0K1A3 114 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms