RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 TCEAL4Q96EI5 215 aa0.67□□□□□ -2.3
VTA1-204ENST00000491881 PBOV1Q9GZY1 135 aa0.67□□□□□ -2.3
VTA1-204ENST00000491881 TMEM138Q9NPI0 162 aa0.67□□□□□ -2.3
VTA1-204ENST00000491881 ARL5AQ9Y689 179 aa0.67□□□□□ -2.3
VTA1-204ENST00000491881 NUP210Q8TEM1 1887 aaPredicted RBP0.67□□□□□ -2.3
VTA1-204ENST00000491881 DUXBA0A1W2PPF3 345 aa0.66□□□□□ -2.3
VTA1-204ENST00000491881 AIPO00170 330 aa0.66□□□□□ -2.3
VTA1-204ENST00000491881 C1QBP02746 253 aa0.66□□□□□ -2.3
VTA1-204ENST00000491881 CXCL8P10145 99 aa0.66□□□□□ -2.3
VTA1-204ENST00000491881 COX7CP15954 63 aa0.66□□□□□ -2.3
VTA1-204ENST00000491881 MUCL1Q96DR8 90 aa0.66□□□□□ -2.3
VTA1-204ENST00000491881 ZNF714Q96N38 554 aa0.66□□□□□ -2.3
VTA1-204ENST00000491881 PYCARDQ9ULZ3 195 aa0.66□□□□□ -2.3
VTA1-204ENST00000491881 MYH2Q9UKX2 1941 aa0.66□□□□□ -2.3
VTA1-204ENST00000491881 B4DSR2 109 aa0.65□□□□□ -2.31
VTA1-204ENST00000491881 G3V2T6 193 aa0.65□□□□□ -2.31
VTA1-204ENST00000491881 CAPZBP47756 277 aa0.65□□□□□ -2.31
VTA1-204ENST00000491881 MT4P47944 62 aa0.65□□□□□ -2.31
VTA1-204ENST00000491881 MT1HP80294 61 aa0.65□□□□□ -2.31
VTA1-204ENST00000491881 SCGB2B2Q4G0G5 96 aa0.65□□□□□ -2.31
VTA1-204ENST00000491881 C1orf134Q5TEV5 83 aa0.65□□□□□ -2.31
VTA1-204ENST00000491881 OR5D16Q8NGK9 328 aa0.65□□□□□ -2.31
VTA1-204ENST00000491881 GGACTQ9BVM4 153 aa0.65□□□□□ -2.31
VTA1-204ENST00000491881 POPDC3Q9HBV1 291 aa0.65□□□□□ -2.31
VTA1-204ENST00000491881 OR52A1Q9UKL2 312 aa0.65□□□□□ -2.31
VTA1-204ENST00000491881 MYO18AQ92614 2054 aaKnown RBP0.65□□□□□ -2.31
VTA1-204ENST00000491881 C10orf142B7Z368 130 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 IFNA14P01570 189 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 IGLV3-1P01715 115 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 CCL4P13236 92 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 RAB5CP51148 216 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 GNG5P63218 68 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 AKR1C8PQ5T2L2 129 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 KRTAP26-1Q6PEX3 210 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 WFDC9Q8NEX5 89 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 Q8TAT8 98 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 PSMF1Q92530 271 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 POP5Q969H6 163 aaKnown RBP0.64□□□□□ -2.31
VTA1-204ENST00000491881 CHCHD1Q96BP2 118 aaKnown RBP0.64□□□□□ -2.31
VTA1-204ENST00000491881 ZHX1-C8orf76Q96EF9 292 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 LYSMD1Q96S90 227 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 OR2J1Q9GZK6 312 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 PRNDQ9UKY0 176 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 MYH8P13535 1937 aa0.64□□□□□ -2.31
VTA1-204ENST00000491881 PLXNA2O75051 1894 aa0.63□□□□□ -2.31
VTA1-204ENST00000491881 A0A087WSZ3 146 aa0.63□□□□□ -2.31
VTA1-204ENST00000491881 H7C1C5 153 aa0.63□□□□□ -2.31
VTA1-204ENST00000491881 CRHP06850 196 aa0.63□□□□□ -2.31
VTA1-204ENST00000491881 LCN6P62502 163 aa0.63□□□□□ -2.31
VTA1-204ENST00000491881 MRPS15P82914 257 aaKnown RBP0.63□□□□□ -2.31
VTA1-204ENST00000491881 HACD4Q5VWC8 232 aa0.63□□□□□ -2.31
VTA1-204ENST00000491881 KRTAP19-3Q7Z4W3 81 aa0.63□□□□□ -2.31
VTA1-204ENST00000491881 EXOC3-AS1Q8N2X6 119 aa0.63□□□□□ -2.31
VTA1-204ENST00000491881 PXT1Q8NFP0 134 aa0.63□□□□□ -2.31
VTA1-204ENST00000491881 WFDC10AQ9H1F0 79 aa0.63□□□□□ -2.31
VTA1-204ENST00000491881 CENPHQ9H3R5 247 aa0.63□□□□□ -2.31
VTA1-204ENST00000491881 SSR3Q9UNL2 185 aa0.63□□□□□ -2.31
VTA1-204ENST00000491881 MYH3P11055 1940 aa0.62□□□□□ -2.31
VTA1-204ENST00000491881 CLPSL1A2RUU4 121 aa0.62□□□□□ -2.31
VTA1-204ENST00000491881 RIIAD1A6NNX1 92 aa0.62□□□□□ -2.31
VTA1-204ENST00000491881 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
VTA1-204ENST00000491881 ATG12O94817 140 aa0.62□□□□□ -2.31
VTA1-204ENST00000491881 PHBP35232 272 aa0.62□□□□□ -2.31
VTA1-204ENST00000491881 TMBIM6P55061 237 aa0.62□□□□□ -2.31
VTA1-204ENST00000491881 DHRS4L2Q6PKH6 230 aa0.62□□□□□ -2.31
VTA1-204ENST00000491881 SPATA8Q6RVD6 105 aa0.62□□□□□ -2.31
VTA1-204ENST00000491881 PATE2Q6UY27 113 aa0.62□□□□□ -2.31
VTA1-204ENST00000491881 LINC00575Q6W349 94 aa0.62□□□□□ -2.31
VTA1-204ENST00000491881 OR5AS1Q8N127 324 aa0.62□□□□□ -2.31
VTA1-204ENST00000491881 OR10AG1Q8NH19 301 aa0.62□□□□□ -2.31
VTA1-204ENST00000491881 HYLS1Q96M11 299 aa0.62□□□□□ -2.31
VTA1-204ENST00000491881 PAIP2Q9BPZ3 127 aaKnown RBP0.62□□□□□ -2.31
VTA1-204ENST00000491881 CCDC94Q9BW85 323 aaPredicted RBP0.62□□□□□ -2.31
VTA1-204ENST00000491881 CACYBPQ9HB71 228 aaKnown RBP0.62□□□□□ -2.31
VTA1-204ENST00000491881 TRAV27A0A087WT01 109 aa0.61□□□□□ -2.31
VTA1-204ENST00000491881 NUPR2A6NF83 97 aa0.61□□□□□ -2.31
VTA1-204ENST00000491881 APOA2P02652 100 aa0.61□□□□□ -2.31
VTA1-204ENST00000491881 IFNA4P05014 189 aa0.61□□□□□ -2.31
VTA1-204ENST00000491881 LRRC18Q8N456 261 aa0.61□□□□□ -2.31
VTA1-204ENST00000491881 PBDC1Q9BVG4 233 aa0.61□□□□□ -2.31
VTA1-204ENST00000491881 LYRM2Q9NU23 88 aaPredicted RBP0.61□□□□□ -2.31
VTA1-204ENST00000491881 SYNE1Q8NF91 8797 aaKnown RBP0.61□□□□□ -2.31
VTA1-204ENST00000491881 CITO14578 2027 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 PPYP01298 95 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 IGLV1-51P01701 117 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 CXCL1P09341 107 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 OGNP20774 298 aaKnown RBP0.6□□□□□ -2.31
VTA1-204ENST00000491881 INSL3P51460 131 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 ARPP19P56211 112 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 ARF6P62330 175 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 KLRD1Q13241 179 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 SNCBQ16143 134 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 SPATA45Q537H7 98 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 ARPINQ7Z6K5 226 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 TEX29Q8N6K0 151 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 OR4S1Q8NGB4 309 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 ZC2HC1AQ96GY0 325 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 SPRR2FQ96RM1 72 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 MAP1LC3BQ9GZQ8 125 aa0.6□□□□□ -2.31
VTA1-204ENST00000491881 TCEAL2Q9H3H9 227 aaPredicted RBP0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms