RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 DEFA1P59665 94 aa13.12□□□□□ -0.31
CLIP2-208ENST00000491075 DEFA3P59666 94 aa13.12□□□□□ -0.31
CLIP2-208ENST00000491075 OR10AG1Q8NH19 301 aa13.12□□□□□ -0.31
CLIP2-208ENST00000491075 DPH3Q96FX2 82 aa13.12□□□□□ -0.31
CLIP2-208ENST00000491075 DPH3P1Q9H4G8 78 aa13.12□□□□□ -0.31
CLIP2-208ENST00000491075 A0A087WYN8 130 aa13.11□□□□□ -0.31
CLIP2-208ENST00000491075 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-208ENST00000491075 GAGE6Q13070 117 aa13.11□□□□□ -0.31
CLIP2-208ENST00000491075 TCEAL7Q9BRU2 100 aa13.11□□□□□ -0.31
CLIP2-208ENST00000491075 DERL1Q9BUN8 251 aa13.11□□□□□ -0.31
CLIP2-208ENST00000491075 ZNF471Q9BX82 626 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-208ENST00000491075 A6NHS1 94 aa13.1□□□□□ -0.31
CLIP2-208ENST00000491075 CXCL1P09341 107 aa13.1□□□□□ -0.31
CLIP2-208ENST00000491075 REG3AQ06141 175 aa13.1□□□□□ -0.31
CLIP2-208ENST00000491075 SPACA4Q8TDM5 124 aa13.1□□□□□ -0.31
CLIP2-208ENST00000491075 AP5S1Q9NUS5 200 aa13.1□□□□□ -0.31
CLIP2-208ENST00000491075 IGLV10-54A0A075B6I4 117 aa13.09□□□□□ -0.31
CLIP2-208ENST00000491075 F5H697 171 aa13.09□□□□□ -0.31
CLIP2-208ENST00000491075 BORCS7-ASMTA0A0B4J1R7 106 aa13.08□□□□□ -0.32
CLIP2-208ENST00000491075 TRAV8-4A0A0B4J246 113 aa13.08□□□□□ -0.32
CLIP2-208ENST00000491075 P01737 135 aa13.08□□□□□ -0.32
CLIP2-208ENST00000491075 CHTF8P0CG12 524 aa13.08□□□□□ -0.32
CLIP2-208ENST00000491075 IQCJQ1A5X6 159 aa13.08□□□□□ -0.32
CLIP2-208ENST00000491075 RPL7L1Q6DKI1 246 aaKnown RBP13.08□□□□□ -0.32
CLIP2-208ENST00000491075 C7orf33Q8WU49 177 aa13.08□□□□□ -0.32
CLIP2-208ENST00000491075 PHOX2AO14813 284 aa13.07□□□□□ -0.32
CLIP2-208ENST00000491075 SNAI2O43623 268 aa13.07□□□□□ -0.32
CLIP2-208ENST00000491075 AKR1C3P42330 323 aa13.07□□□□□ -0.32
CLIP2-208ENST00000491075 FHITP49789 147 aa13.07□□□□□ -0.32
CLIP2-208ENST00000491075 SPANXN1Q5VSR9 72 aa13.07□□□□□ -0.32
CLIP2-208ENST00000491075 PLAC8Q9NZF1 115 aa13.07□□□□□ -0.32
CLIP2-208ENST00000491075 IGHV1-24A0A0C4DH33 117 aa13.06□□□□□ -0.32
CLIP2-208ENST00000491075 AKR1C8PQ5T2L2 129 aa13.06□□□□□ -0.32
CLIP2-208ENST00000491075 LINC01600Q96MT4 127 aa13.06□□□□□ -0.32
CLIP2-208ENST00000491075 MAP1LC3B2A6NCE7 125 aa13.05□□□□□ -0.32
CLIP2-208ENST00000491075 OR5AL1P0C617 328 aa13.05□□□□□ -0.32
CLIP2-208ENST00000491075 GZMBP10144 247 aa13.05□□□□□ -0.32
CLIP2-208ENST00000491075 CST9LP1Q5W188 147 aa13.05□□□□□ -0.32
CLIP2-208ENST00000491075 INO80EQ8NBZ0 244 aaPredicted RBP13.05□□□□□ -0.32
CLIP2-208ENST00000491075 STOML3Q8TAV4 291 aa13.05□□□□□ -0.32
CLIP2-208ENST00000491075 SSBP4Q9BWG4 385 aaPredicted RBP13.05□□□□□ -0.32
CLIP2-208ENST00000491075 MAP1LC3BQ9GZQ8 125 aa13.05□□□□□ -0.32
CLIP2-208ENST00000491075 ALG5Q9Y673 324 aa13.05□□□□□ -0.32
CLIP2-208ENST00000491075 SLPIP03973 132 aa13.04□□□□□ -0.32
CLIP2-208ENST00000491075 SMIM17P0DL12 118 aa13.04□□□□□ -0.32
CLIP2-208ENST00000491075 C20orf203Q8NBC4 194 aa13.04□□□□□ -0.32
CLIP2-208ENST00000491075 AP1S3Q96PC3 154 aa13.04□□□□□ -0.32
CLIP2-208ENST00000491075 KIF25-AS1Q9Y6Z4 181 aa13.03□□□□□ -0.32
CLIP2-208ENST00000491075 MUC21A0A0G2JKD1 596 aa13.02□□□□□ -0.33
CLIP2-208ENST00000491075 MUC21A0A140T8X8 626 aa13.02□□□□□ -0.33
CLIP2-208ENST00000491075 A0A1B0GUV1 79 aa13.01□□□□□ -0.33
CLIP2-208ENST00000491075 S100A9P06702 114 aaKnown RBP13.01□□□□□ -0.33
CLIP2-208ENST00000491075 PRR3P79522 188 aaKnown RBP13□□□□□ -0.33
CLIP2-208ENST00000491075 Q5BKY6 102 aa13□□□□□ -0.33
CLIP2-208ENST00000491075 TMEM243Q9BU79 118 aa13□□□□□ -0.33
CLIP2-208ENST00000491075 MED28Q9H204 178 aa13□□□□□ -0.33
CLIP2-208ENST00000491075 IGLV4-60A0A075B6I1 120 aa12.99□□□□□ -0.33
CLIP2-208ENST00000491075 H7C1H1 209 aa12.99□□□□□ -0.33
CLIP2-208ENST00000491075 SSTP61278 116 aa12.99□□□□□ -0.33
CLIP2-208ENST00000491075 WDR73Q6P4I2 378 aa12.99□□□□□ -0.33
CLIP2-208ENST00000491075 MLST8Q9BVC4 326 aa12.99□□□□□ -0.33
CLIP2-208ENST00000491075 M0QY20 66 aa12.98□□□□□ -0.33
CLIP2-208ENST00000491075 RAB5CP51148 216 aa12.98□□□□□ -0.33
CLIP2-208ENST00000491075 GFRA4Q9GZZ7 299 aa12.98□□□□□ -0.33
CLIP2-208ENST00000491075 FXYD6-FXYD2A0A087WZ82 144 aa12.97□□□□□ -0.33
CLIP2-208ENST00000491075 A0A0J9YXV3 536 aa12.97□□□□□ -0.33
CLIP2-208ENST00000491075 GIPP09681 153 aaPredicted RBP12.97□□□□□ -0.33
CLIP2-208ENST00000491075 COX6A2Q02221 97 aa12.97□□□□□ -0.33
CLIP2-208ENST00000491075 BAGE2Q86Y30 109 aa12.97□□□□□ -0.33
CLIP2-208ENST00000491075 GTSF1Q8WW33 167 aa12.97□□□□□ -0.33
CLIP2-208ENST00000491075 PAGE4O60829 102 aa12.96□□□□□ -0.33
CLIP2-208ENST00000491075 NDUFS6O75380 124 aaKnown RBP12.96□□□□□ -0.33
CLIP2-208ENST00000491075 MGPP08493 103 aa12.96□□□□□ -0.33
CLIP2-208ENST00000491075 ODF1Q14990 250 aa12.96□□□□□ -0.33
CLIP2-208ENST00000491075 MAJINQ3KP22 176 aa12.96□□□□□ -0.33
CLIP2-208ENST00000491075 CFAP161Q6P656 301 aa12.96□□□□□ -0.33
CLIP2-208ENST00000491075 C15orf56Q8N910 161 aa12.96□□□□□ -0.33
CLIP2-208ENST00000491075 RPS10P46783 165 aaKnown RBP12.95□□□□□ -0.34
CLIP2-208ENST00000491075 PGLYRP4Q96LB8 373 aa12.95□□□□□ -0.34
CLIP2-208ENST00000491075 SCO2A0A1W2PP80 73 aa12.94□□□□□ -0.34
CLIP2-208ENST00000491075 UBE2L6O14933 153 aa12.94□□□□□ -0.34
CLIP2-208ENST00000491075 SULT1A2P50226 295 aa12.94□□□□□ -0.34
CLIP2-208ENST00000491075 SUMO4Q6EEV6 95 aa12.94□□□□□ -0.34
CLIP2-208ENST00000491075 IGKV2-24A0A0C4DH68 120 aa12.93□□□□□ -0.34
CLIP2-208ENST00000491075 NKX2-5P52952 324 aaPredicted RBP12.93□□□□□ -0.34
CLIP2-208ENST00000491075 REG3GQ6UW15 175 aa12.93□□□□□ -0.34
CLIP2-208ENST00000491075 STPG4Q8N801 248 aa12.93□□□□□ -0.34
CLIP2-208ENST00000491075 PFDN1O60925 122 aa12.92□□□□□ -0.34
CLIP2-208ENST00000491075 RASL11AQ6T310 242 aa12.92□□□□□ -0.34
CLIP2-208ENST00000491075 PRSS3P2Q8NHM4 247 aa12.92□□□□□ -0.34
CLIP2-208ENST00000491075 GAGE12HA6NDE8 117 aa12.91□□□□□ -0.34
CLIP2-208ENST00000491075 KRTAP10-8P60410 259 aa12.91□□□□□ -0.34
CLIP2-208ENST00000491075 SPINK6Q6UWN8 80 aa12.91□□□□□ -0.34
CLIP2-208ENST00000491075 HIGD2BQ4VC39 106 aa12.9□□□□□ -0.34
CLIP2-208ENST00000491075 LYPD6BQ8NI32 183 aa12.9□□□□□ -0.34
CLIP2-208ENST00000491075 TPPP3Q9BW30 176 aa12.9□□□□□ -0.34
CLIP2-208ENST00000491075 IGLC6P0CF74 106 aa12.89□□□□□ -0.35
CLIP2-208ENST00000491075 AMTP48728 403 aa12.89□□□□□ -0.35
CLIP2-208ENST00000491075 FER1L6-AS1Q8NA97 138 aa12.89□□□□□ -0.35
CLIP2-208ENST00000491075 CACNG7P62955 275 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms