RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 WFDC10BQ8IUB3 73 aa9.82□□□□□ -0.84
SRGAP3-208ENST00000490348 GTSF1LQ9H1H1 148 aa9.82□□□□□ -0.84
SRGAP3-208ENST00000490348 DPH3P1Q9H4G8 78 aa9.82□□□□□ -0.84
SRGAP3-208ENST00000490348 CARHSP1Q9Y2V2 147 aaKnown RBP9.82□□□□□ -0.84
SRGAP3-208ENST00000490348 TRBV7-3A0A075B6L6 115 aa9.81□□□□□ -0.84
SRGAP3-208ENST00000490348 A0A1B0GUT8 65 aa9.81□□□□□ -0.84
SRGAP3-208ENST00000490348 UBE2D3P61077 147 aa9.81□□□□□ -0.84
SRGAP3-208ENST00000490348 UBE2D2P62837 147 aa9.81□□□□□ -0.84
SRGAP3-208ENST00000490348 C10orf91Q5T1B1 145 aa9.81□□□□□ -0.84
SRGAP3-208ENST00000490348 PKD1P98161 4303 aa9.81□□□□□ -0.84
SRGAP3-208ENST00000490348 PNRC1Q12796 327 aaPredicted RBP9.8□□□□□ -0.84
SRGAP3-208ENST00000490348 NAT8BQ9UHF3 227 aa9.8□□□□□ -0.84
SRGAP3-208ENST00000490348 TRAV26-2A0A0B4J265 109 aa9.8□□□□□ -0.84
SRGAP3-208ENST00000490348 SIVA1O15304 175 aa9.8□□□□□ -0.84
SRGAP3-208ENST00000490348 RPL36AP83881 106 aaKnown RBP9.8□□□□□ -0.84
SRGAP3-208ENST00000490348 CLRN3Q8NCR9 226 aa9.8□□□□□ -0.84
SRGAP3-208ENST00000490348 RPL36ALQ969Q0 106 aaKnown RBP9.8□□□□□ -0.84
SRGAP3-208ENST00000490348 SEC11CQ9BY50 192 aa9.8□□□□□ -0.84
SRGAP3-208ENST00000490348 F8W036 122 aa9.79□□□□□ -0.84
SRGAP3-208ENST00000490348 LELP1Q5T871 98 aa9.79□□□□□ -0.84
SRGAP3-208ENST00000490348 DNAH11Q96DT5 4516 aa9.79□□□□□ -0.84
SRGAP3-208ENST00000490348 RTL8CO15255 209 aa9.78□□□□□ -0.84
SRGAP3-208ENST00000490348 SNAPINO95295 136 aa9.78□□□□□ -0.84
SRGAP3-208ENST00000490348 GATD1Q8NB37 220 aa9.78□□□□□ -0.84
SRGAP3-208ENST00000490348 IGHV3-38A0A0C4DH36 116 aa9.77□□□□□ -0.85
SRGAP3-208ENST00000490348 DNAH10OSP0CZ25 163 aa9.77□□□□□ -0.85
SRGAP3-208ENST00000490348 BORCS7Q96B45 105 aa9.77□□□□□ -0.85
SRGAP3-208ENST00000490348 GAS8-AS1O95177 125 aa9.76□□□□□ -0.85
SRGAP3-208ENST00000490348 OR10J3Q5JRS4 329 aa9.76□□□□□ -0.85
SRGAP3-208ENST00000490348 RASL11AQ6T310 242 aa9.76□□□□□ -0.85
SRGAP3-208ENST00000490348 ATRAIDQ6UW56 229 aa9.76□□□□□ -0.85
SRGAP3-208ENST00000490348 Q8N3U1 123 aa9.76□□□□□ -0.85
SRGAP3-208ENST00000490348 RNF185Q96GF1 192 aa9.76□□□□□ -0.85
SRGAP3-208ENST00000490348 TMEM191AQ9H0A3 160 aa9.76□□□□□ -0.85
SRGAP3-208ENST00000490348 H7C1H1 209 aa9.75□□□□□ -0.85
SRGAP3-208ENST00000490348 PPP1R2P9O14990 202 aa9.75□□□□□ -0.85
SRGAP3-208ENST00000490348 RIGQ13278 110 aa9.75□□□□□ -0.85
SRGAP3-208ENST00000490348 SMIM15Q7Z3B0 74 aa9.75□□□□□ -0.85
SRGAP3-208ENST00000490348 A0A1B0GXF2 115 aa9.75□□□□□ -0.85
SRGAP3-208ENST00000490348 MT-ND4LP03901 98 aa9.75□□□□□ -0.85
SRGAP3-208ENST00000490348 TTC32Q5I0X7 151 aa9.75□□□□□ -0.85
SRGAP3-208ENST00000490348 AMN1Q8IY45 258 aa9.75□□□□□ -0.85
SRGAP3-208ENST00000490348 ANAPC16Q96DE5 110 aa9.75□□□□□ -0.85
SRGAP3-208ENST00000490348 RPL39LQ96EH5 51 aaKnown RBP9.75□□□□□ -0.85
SRGAP3-208ENST00000490348 DNAJC30Q96LL9 226 aa9.75□□□□□ -0.85
SRGAP3-208ENST00000490348 NIT2Q9NQR4 276 aa9.75□□□□□ -0.85
SRGAP3-208ENST00000490348 A0A087WWC5 75 aa9.74□□□□□ -0.85
SRGAP3-208ENST00000490348 TRAV8-6A0A0B4J262 113 aa9.74□□□□□ -0.85
SRGAP3-208ENST00000490348 RAB4AP20338 218 aa9.74□□□□□ -0.85
SRGAP3-208ENST00000490348 LINC01556Q5JQF7 62 aa9.74□□□□□ -0.85
SRGAP3-208ENST00000490348 C1orf134Q5TEV5 83 aa9.74□□□□□ -0.85
SRGAP3-208ENST00000490348 MRPL54Q6P161 138 aaKnown RBP9.74□□□□□ -0.85
SRGAP3-208ENST00000490348 NTM-AS1Q6ZSK4 140 aa9.74□□□□□ -0.85
SRGAP3-208ENST00000490348 TNFRSF18Q9Y5U5 241 aa9.74□□□□□ -0.85
SRGAP3-208ENST00000490348 CAMPP49913 170 aa9.73□□□□□ -0.85
SRGAP3-208ENST00000490348 DAZ4Q86SG3 579 aaKnown RBP9.73□□□□□ -0.85
SRGAP3-208ENST00000490348 C6orf223Q8N319 242 aa9.73□□□□□ -0.85
SRGAP3-208ENST00000490348 DAZ3Q9NR90 486 aaKnown RBP9.73□□□□□ -0.85
SRGAP3-208ENST00000490348 TRBV6-8A0A0A6YYG3 113 aa9.72□□□□□ -0.85
SRGAP3-208ENST00000490348 RPS10P46783 165 aaKnown RBP9.71□□□□□ -0.85
SRGAP3-208ENST00000490348 DEFB104AQ8WTQ1 72 aa9.71□□□□□ -0.85
SRGAP3-208ENST00000490348 FRZBQ92765 325 aa9.71□□□□□ -0.85
SRGAP3-208ENST00000490348 A0A1B0GW15 77 aa9.71□□□□□ -0.86
SRGAP3-208ENST00000490348 SMKR1H3BMG3 65 aa9.71□□□□□ -0.86
SRGAP3-208ENST00000490348 IGHV3-30P01768 117 aa9.71□□□□□ -0.86
SRGAP3-208ENST00000490348 IGHV3-33P01772 117 aa9.71□□□□□ -0.86
SRGAP3-208ENST00000490348 IGHV3-30-3P0DP02 117 aa9.71□□□□□ -0.86
SRGAP3-208ENST00000490348 IGHV3-30-5P0DP03 117 aa9.71□□□□□ -0.86
SRGAP3-208ENST00000490348 HBBP68871 147 aa9.71□□□□□ -0.86
SRGAP3-208ENST00000490348 FAM104BQ5XKR9 115 aa9.71□□□□□ -0.86
SRGAP3-208ENST00000490348 Q6ZRN7 208 aaPredicted RBP9.71□□□□□ -0.86
SRGAP3-208ENST00000490348 NIT1Q86X76 327 aa9.71□□□□□ -0.86
SRGAP3-208ENST00000490348 BIRC6Q9NR09 4857 aa9.7□□□□□ -0.86
SRGAP3-208ENST00000490348 NCR2O95944 276 aa9.7□□□□□ -0.86
SRGAP3-208ENST00000490348 K7EP13 123 aa9.69□□□□□ -0.86
SRGAP3-208ENST00000490348 MRPL51Q4U2R6 128 aaKnown RBP9.69□□□□□ -0.86
SRGAP3-208ENST00000490348 ATP5L2Q7Z4Y8 100 aa9.69□□□□□ -0.86
SRGAP3-208ENST00000490348 MRAP2Q96G30 205 aa9.69□□□□□ -0.86
SRGAP3-208ENST00000490348 TRAV9-2A0A087WT02 112 aa9.68□□□□□ -0.86
SRGAP3-208ENST00000490348 TRBV6-5A0A0K0K1A5 114 aa9.68□□□□□ -0.86
SRGAP3-208ENST00000490348 C7orf77A4D0Y5 90 aa9.68□□□□□ -0.86
SRGAP3-208ENST00000490348 IQCJQ1A5X6 159 aa9.68□□□□□ -0.86
SRGAP3-208ENST00000490348 LINC00336Q6ZUF6 198 aa9.68□□□□□ -0.86
SRGAP3-208ENST00000490348 NRACQ8N912 160 aa9.68□□□□□ -0.86
SRGAP3-208ENST00000490348 CTDSP1Q9GZU7 261 aa9.68□□□□□ -0.86
SRGAP3-208ENST00000490348 SMCO4Q9NRQ5 59 aa9.68□□□□□ -0.86
SRGAP3-208ENST00000490348 SDHAF1A6NFY7 115 aa9.67□□□□□ -0.86
SRGAP3-208ENST00000490348 PRSS29PA6NIE9 313 aa9.67□□□□□ -0.86
SRGAP3-208ENST00000490348 BTF3P20290 206 aaKnown RBP9.67□□□□□ -0.86
SRGAP3-208ENST00000490348 C10orf126Q8N4M7 172 aa9.67□□□□□ -0.86
SRGAP3-208ENST00000490348 IMMP2LQ96T52 175 aa9.67□□□□□ -0.86
SRGAP3-208ENST00000490348 A0A1B0GVY2 172 aa9.67□□□□□ -0.86
SRGAP3-208ENST00000490348 IBA57-AS1B1ANH7 110 aa9.67□□□□□ -0.86
SRGAP3-208ENST00000490348 TNP2Q05952 138 aa9.67□□□□□ -0.86
SRGAP3-208ENST00000490348 TMEM97Q5BJF2 176 aa9.67□□□□□ -0.86
SRGAP3-208ENST00000490348 DNAH5Q8TE73 4624 aa9.66□□□□□ -0.86
SRGAP3-208ENST00000490348 TRBV25-1A0A075B6N4 114 aa9.66□□□□□ -0.86
SRGAP3-208ENST00000490348 IGHV1-24A0A0C4DH33 117 aa9.66□□□□□ -0.86
SRGAP3-208ENST00000490348 S100A8P05109 93 aa9.66□□□□□ -0.86
SRGAP3-208ENST00000490348 MPV17L2Q567V2 206 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms