RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 VPS13CQ709C8 3753 aa2.59□□□□□ -2
CRNKL1-203ENST00000490258 SPTBN1Q01082 2364 aaKnown RBP2.58□□□□□ -2
CRNKL1-203ENST00000490258 CSMD1Q96PZ7 3565 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 RP1L1Q8IWN7 2480 aaPredicted RBP2.58□□□□□ -2
CRNKL1-203ENST00000490258 IGLV11-55A0A075B6I3 123 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 IGKV2D-30A0A075B6S6 120 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 IGKV2-40A0A087WW87 121 aaPredicted RBP2.58□□□□□ -2
CRNKL1-203ENST00000490258 IGHV3-72A0A0B4J1Y9 119 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 TRAV25A0A0B4J276 109 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 IGHV1-69DA0A0B4J2H0 117 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 IGKV3D-20A0A0C4DH25 116 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 IGHV1-3A0A0C4DH29 117 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 IGHV4-61A0A0C4DH41 118 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 IGHV7-4-1A0A0J9YVY3 117 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 TRBV7-9A0A0J9YWB2 115 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 GAGE12JA6NER3 117 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 FABP5P3A8MUU1 101 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 A8MWV9 139 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 TMEM178BH3BS89 294 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 M0R381 172 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 PLXNB1O43157 2135 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 GAGE7O76087 117 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 NXPH4O95158 308 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 TCL1BO95988 128 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 IGKV2D-40P01614 121 aaPredicted RBP2.58□□□□□ -2
CRNKL1-203ENST00000490258 GAGE12FP0CL80 117 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 GAGE12GP0CL81 117 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 GAGE12IP0CL82 117 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 IGHV1-8P0DP01 117 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 NDUFV3P56181 108 aaKnown RBP2.58□□□□□ -2
CRNKL1-203ENST00000490258 GAGE4Q13068 117 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 ERCC8Q13216 396 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 ORMDL2Q53FV1 153 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 PPP1R27Q86WC6 154 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 NDUFA11Q86Y39 141 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 ANKRD29Q8N6D5 301 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 NPBQ8NG41 125 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 CCL17Q92583 94 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 RASL10AQ92737 203 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 DUX5Q96PT3 197 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 AMELXQ99217 191 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 CCL19Q99731 98 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 ANAPC13Q9BS18 74 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 PRADC1Q9BSG0 188 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 BPESC1Q9GZL8 116 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 FBXL15Q9H469 300 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 Q9H8V8 135 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 HIF1ANQ9NWT6 349 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 SS18L2Q9UHA2 77 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 TNCP24821 2201 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 NAV3Q8IVL0 2385 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 CRYBG3Q68DQ2 2970 aa2.58□□□□□ -2
CRNKL1-203ENST00000490258 COL12A1Q99715 3063 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 PRRC2AP48634 2157 aaKnown RBP2.57□□□□□ -2
CRNKL1-203ENST00000490258 TMSB15BA0A087X1C1 80 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 A0A0B4J2C4 111 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 A0A0J9YX75 114 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 A0A0J9YY99 117 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 TRBV7-7A0A0K0K1E9 115 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 BUB1B-PAK6H3BSN5 160 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 NDUFB3O43676 98 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 NDUFA3O95167 84 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 IGHV3-30P01768 117 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 APELAP0DMC3 54 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 IGHV3-30-5P0DP03 117 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 GATA1P15976 413 aaPredicted RBP2.57□□□□□ -2
CRNKL1-203ENST00000490258 CNTFRP26992 372 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 HLA-DMBP28068 263 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 EFNA4P52798 201 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 SEC61GP60059 68 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 DEFB121Q5J5C9 76 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 PAPPA-AS1Q5QFB9 102 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 ZFP2Q6ZN57 461 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 DYNAPQ8N1N2 210 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 C10orf126Q8N4M7 172 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 TEX29Q8N6K0 151 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 SLC25A29Q8N8R3 303 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 WFDC11Q8NEX6 87 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 Q8TAT8 98 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 BAALCQ8WXS3 180 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 PLEKHB2Q96CS7 222 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 ODF3Q96PU9 254 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 SPANXDQ9BXN6 97 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 LENEPQ9Y5L5 61 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 SMAD5-AS1Q9Y6J3 95 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 ZNF469Q96JG9 3925 aaPredicted RBP2.57□□□□□ -2
CRNKL1-203ENST00000490258 ANK3Q12955 4377 aaKnown RBP2.57□□□□□ -2
CRNKL1-203ENST00000490258 ADGRG4Q8IZF6 3080 aa2.57□□□□□ -2
CRNKL1-203ENST00000490258 CUBNO60494 3623 aa2.56□□□□□ -2
CRNKL1-203ENST00000490258 IGLV4-69A0A075B6H9 119 aa2.56□□□□□ -2
CRNKL1-203ENST00000490258 IGHV4OR15-8A0A075B7B6 117 aa2.56□□□□□ -2
CRNKL1-203ENST00000490258 A0A087WW49 117 aa2.56□□□□□ -2
CRNKL1-203ENST00000490258 IGHV3-21A0A0B4J1V1 117 aa2.56□□□□□ -2
CRNKL1-203ENST00000490258 C11orf86A6NJI1 115 aa2.56□□□□□ -2
CRNKL1-203ENST00000490258 ZNF815PA8K554 130 aa2.56□□□□□ -2
CRNKL1-203ENST00000490258 NDUFA7O95182 113 aa2.56□□□□□ -2
CRNKL1-203ENST00000490258 BRI3O95415 125 aa2.56□□□□□ -2
CRNKL1-203ENST00000490258 PPP1R17O96001 155 aa2.56□□□□□ -2
CRNKL1-203ENST00000490258 IGHV3-33P01772 117 aa2.56□□□□□ -2
CRNKL1-203ENST00000490258 TRGV3P03979 118 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms